RNA–Protein interactions for RNA: ENST00000639306.1

KCNA1-203, Transcript of potassium voltage-gated channel subfamily A member 1, humanhuman

TSL 5

Gene KCNA1, Length 2,618 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1-203ENST00000639306 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
KCNA1-203ENST00000639306 VPS8Q8N3P4 1428 aa17.98■□□□□ 0.47
KCNA1-203ENST00000639306 GAPVD1Q14C86 1478 aa17.97■□□□□ 0.47
KCNA1-203ENST00000639306 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
KCNA1-203ENST00000639306 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
KCNA1-203ENST00000639306 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
KCNA1-203ENST00000639306 ZNF316A6NFI3 1004 aaPredicted RBP17.93■□□□□ 0.46
KCNA1-203ENST00000639306 CTTNBP2Q8WZ74 1663 aa17.91■□□□□ 0.46
KCNA1-203ENST00000639306 KANK4Q5T7N3 995 aaPredicted RBP17.9■□□□□ 0.46
KCNA1-203ENST00000639306 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
KCNA1-203ENST00000639306 MIER1Q8N108 512 aa17.89■□□□□ 0.45
KCNA1-203ENST00000639306 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
KCNA1-203ENST00000639306 APLP2Q06481 763 aa17.86■□□□□ 0.45
KCNA1-203ENST00000639306 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
KCNA1-203ENST00000639306 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
KCNA1-203ENST00000639306 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
KCNA1-203ENST00000639306 EFCAB5A4FU69 1503 aa17.83■□□□□ 0.44
KCNA1-203ENST00000639306 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
KCNA1-203ENST00000639306 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
KCNA1-203ENST00000639306 AQRO60306 1485 aaKnown RBP eCLIP17.77■□□□□ 0.43
KCNA1-203ENST00000639306 ZNF608Q9ULD9 1512 aaPredicted RBP17.75■□□□□ 0.43
KCNA1-203ENST00000639306 MAP3K1Q13233 1512 aa17.72■□□□□ 0.43
KCNA1-203ENST00000639306 SAMD9Q5K651 1589 aa17.72■□□□□ 0.43
KCNA1-203ENST00000639306 MAGI1Q96QZ7 1491 aaPredicted RBP17.72■□□□□ 0.43
KCNA1-203ENST00000639306 P3H3Q8IVL6 736 aa17.7■□□□□ 0.42
KCNA1-203ENST00000639306 ITGAEP38570 1179 aa17.68■□□□□ 0.42
KCNA1-203ENST00000639306 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
KCNA1-203ENST00000639306 IQGAP2Q13576 1575 aa17.65■□□□□ 0.42
KCNA1-203ENST00000639306 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
KCNA1-203ENST00000639306 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
KCNA1-203ENST00000639306 FYCO1Q9BQS8 1478 aa17.61■□□□□ 0.41
KCNA1-203ENST00000639306 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
KCNA1-203ENST00000639306 FMN1Q68DA7 1419 aa17.61■□□□□ 0.41
KCNA1-203ENST00000639306 UGGT2Q9NYU1 1516 aa17.6■□□□□ 0.41
KCNA1-203ENST00000639306 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
KCNA1-203ENST00000639306 PCF11O94913 1555 aaKnown RBP17.59■□□□□ 0.41
KCNA1-203ENST00000639306 KIAA0586Q9BVV6 1533 aa17.59■□□□□ 0.41
KCNA1-203ENST00000639306 CASKIN1Q8WXD9 1431 aa17.58■□□□□ 0.41
KCNA1-203ENST00000639306 DHX57Q6P158 1386 aaKnown RBP17.57■□□□□ 0.4
KCNA1-203ENST00000639306 ATP1B4Q9UN42 357 aaPredicted RBP17.57■□□□□ 0.4
KCNA1-203ENST00000639306 FHOD3Q2V2M9 1422 aa17.56■□□□□ 0.4
KCNA1-203ENST00000639306 RRBP1Q9P2E9 1410 aaKnown RBP17.53■□□□□ 0.4
KCNA1-203ENST00000639306 NUP160Q12769 1436 aa17.52■□□□□ 0.39
KCNA1-203ENST00000639306 CCNB3Q8WWL7 1395 aa17.51■□□□□ 0.39
KCNA1-203ENST00000639306 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
KCNA1-203ENST00000639306 LRRC9Q6ZRR7 1453 aa17.48■□□□□ 0.39
KCNA1-203ENST00000639306 KIAA0556O60303 1618 aa17.47■□□□□ 0.39
KCNA1-203ENST00000639306 PHLDB1Q86UU1 1377 aa17.47■□□□□ 0.39
KCNA1-203ENST00000639306 DISP1Q96F81 1524 aa17.44■□□□□ 0.38
KCNA1-203ENST00000639306 HECW1Q76N89 1606 aa17.44■□□□□ 0.38
KCNA1-203ENST00000639306 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
KCNA1-203ENST00000639306 LRRIQ1Q96JM4 1722 aa17.43■□□□□ 0.38
KCNA1-203ENST00000639306 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
KCNA1-203ENST00000639306 FAM50AQ14320 339 aaKnown RBP17.42■□□□□ 0.38
KCNA1-203ENST00000639306 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
KCNA1-203ENST00000639306 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
KCNA1-203ENST00000639306 SUPT16HQ9Y5B9 1047 aaKnown RBP17.38■□□□□ 0.37
KCNA1-203ENST00000639306 CHD1O14646 1710 aa17.38■□□□□ 0.37
KCNA1-203ENST00000639306 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
KCNA1-203ENST00000639306 CARMIL2Q6F5E8 1435 aa17.34■□□□□ 0.37
KCNA1-203ENST00000639306 MYT1Q01538 1121 aa17.33■□□□□ 0.36
KCNA1-203ENST00000639306 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
KCNA1-203ENST00000639306 SIN3AQ96ST3 1273 aa17.32■□□□□ 0.36
KCNA1-203ENST00000639306 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
KCNA1-203ENST00000639306 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
KCNA1-203ENST00000639306 SUPT6HQ7KZ85 1726 aaKnown RBP17.31■□□□□ 0.36
KCNA1-203ENST00000639306 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
KCNA1-203ENST00000639306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.3■□□□□ 0.36
KCNA1-203ENST00000639306 BCANQ96GW7 911 aa17.3■□□□□ 0.36
KCNA1-203ENST00000639306 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
KCNA1-203ENST00000639306 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.36
KCNA1-203ENST00000639306 FBLN2P98095 1184 aa17.27■□□□□ 0.35
KCNA1-203ENST00000639306 JPH4Q96JJ6 628 aa17.27■□□□□ 0.35
KCNA1-203ENST00000639306 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
KCNA1-203ENST00000639306 SETD5Q9C0A6 1442 aa17.25■□□□□ 0.35
KCNA1-203ENST00000639306 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
KCNA1-203ENST00000639306 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
KCNA1-203ENST00000639306 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
KCNA1-203ENST00000639306 CLASP1Q7Z460 1538 aa17.22■□□□□ 0.35
KCNA1-203ENST00000639306 ABCA8O94911 1581 aa17.22■□□□□ 0.35
KCNA1-203ENST00000639306 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
KCNA1-203ENST00000639306 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
KCNA1-203ENST00000639306 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
KCNA1-203ENST00000639306 CDK13Q14004 1512 aaKnown RBP17.19■□□□□ 0.34
KCNA1-203ENST00000639306 PTPRKQ15262 1439 aa17.19■□□□□ 0.34
KCNA1-203ENST00000639306 FGD6Q6ZV73 1430 aa17.19■□□□□ 0.34
KCNA1-203ENST00000639306 MYOM3Q5VTT5 1437 aa17.18■□□□□ 0.34
KCNA1-203ENST00000639306 PRG4Q92954 1404 aaPredicted RBP17.17■□□□□ 0.34
KCNA1-203ENST00000639306 ADCY10Q96PN6 1610 aa17.16■□□□□ 0.34
KCNA1-203ENST00000639306 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
KCNA1-203ENST00000639306 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
KCNA1-203ENST00000639306 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.33
KCNA1-203ENST00000639306 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
KCNA1-203ENST00000639306 CDK11AQ9UQ88 783 aaPredicted RBP17.11■□□□□ 0.33
KCNA1-203ENST00000639306 PTPN23Q9H3S7 1636 aa17.11■□□□□ 0.33
KCNA1-203ENST00000639306 TROQ12816 1431 aaPredicted RBP17.1■□□□□ 0.33
KCNA1-203ENST00000639306 PTPRGP23470 1445 aa17.09■□□□□ 0.33
KCNA1-203ENST00000639306 FKBP8Q14318 412 aa17.08■□□□□ 0.33
KCNA1-203ENST00000639306 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.33
KCNA1-203ENST00000639306 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms