RNA–Protein interactions for RNA: ENST00000638921.1

GFAP-230, Transcript of glial fibrillary acidic protein, humanhuman

Gene GFAP, Length 2,617 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-230ENST00000638921 RAB3GAP2Q9H2M9 1393 aa20.88■□□□□ 0.93
GFAP-230ENST00000638921 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
GFAP-230ENST00000638921 CC2D2AQ9P2K1 1620 aa20.84■□□□□ 0.93
GFAP-230ENST00000638921 PHLDB1Q86UU1 1377 aa20.82■□□□□ 0.92
GFAP-230ENST00000638921 SETD5Q9C0A6 1442 aa20.82■□□□□ 0.92
GFAP-230ENST00000638921 ANP32EQ9BTT0 268 aa20.8■□□□□ 0.92
GFAP-230ENST00000638921 MAPKBP1O60336 1514 aa20.8■□□□□ 0.92
GFAP-230ENST00000638921 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
GFAP-230ENST00000638921 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
GFAP-230ENST00000638921 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
GFAP-230ENST00000638921 PCF11O94913 1555 aaKnown RBP20.76■□□□□ 0.91
GFAP-230ENST00000638921 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
GFAP-230ENST00000638921 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
GFAP-230ENST00000638921 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
GFAP-230ENST00000638921 FAM50AQ14320 339 aaKnown RBP20.74■□□□□ 0.91
GFAP-230ENST00000638921 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
GFAP-230ENST00000638921 EFCAB5A4FU69 1503 aa20.73■□□□□ 0.91
GFAP-230ENST00000638921 FYCO1Q9BQS8 1478 aa20.72■□□□□ 0.91
GFAP-230ENST00000638921 FHOD3Q2V2M9 1422 aa20.72■□□□□ 0.91
GFAP-230ENST00000638921 ATP1B4Q9UN42 357 aaPredicted RBP20.7■□□□□ 0.9
GFAP-230ENST00000638921 CASKIN1Q8WXD9 1431 aa20.7■□□□□ 0.9
GFAP-230ENST00000638921 AQRO60306 1485 aaKnown RBP eCLIP20.7■□□□□ 0.9
GFAP-230ENST00000638921 CUL7Q14999 1698 aa20.68■□□□□ 0.9
GFAP-230ENST00000638921 NESP48681 1621 aa20.68■□□□□ 0.9
GFAP-230ENST00000638921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.67■□□□□ 0.9
GFAP-230ENST00000638921 TIMELESSQ9UNS1 1208 aa20.64■□□□□ 0.89
GFAP-230ENST00000638921 FMN1Q68DA7 1419 aa20.62■□□□□ 0.89
GFAP-230ENST00000638921 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
GFAP-230ENST00000638921 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
GFAP-230ENST00000638921 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
GFAP-230ENST00000638921 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
GFAP-230ENST00000638921 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
GFAP-230ENST00000638921 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
GFAP-230ENST00000638921 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
GFAP-230ENST00000638921 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
GFAP-230ENST00000638921 LAMC3Q9Y6N6 1575 aa20.54■□□□□ 0.88
GFAP-230ENST00000638921 MTUS2Q5JR59 1369 aa20.51■□□□□ 0.87
GFAP-230ENST00000638921 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
GFAP-230ENST00000638921 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
GFAP-230ENST00000638921 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
GFAP-230ENST00000638921 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
GFAP-230ENST00000638921 DDX10Q13206 875 aaKnown RBP20.48■□□□□ 0.87
GFAP-230ENST00000638921 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
GFAP-230ENST00000638921 KCNH8Q96L42 1107 aa20.47■□□□□ 0.87
GFAP-230ENST00000638921 HFM1A2PYH4 1435 aa20.45■□□□□ 0.86
GFAP-230ENST00000638921 GRIN2BQ13224 1484 aa20.44■□□□□ 0.86
GFAP-230ENST00000638921 CCDC18Q5T9S5 1454 aa20.44■□□□□ 0.86
GFAP-230ENST00000638921 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
GFAP-230ENST00000638921 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
GFAP-230ENST00000638921 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
GFAP-230ENST00000638921 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
GFAP-230ENST00000638921 MYOM3Q5VTT5 1437 aa20.42■□□□□ 0.86
GFAP-230ENST00000638921 UACAQ9BZF9 1416 aa20.42■□□□□ 0.86
GFAP-230ENST00000638921 TONSLQ96HA7 1378 aa20.39■□□□□ 0.85
GFAP-230ENST00000638921 PTPN23Q9H3S7 1636 aa20.39■□□□□ 0.85
GFAP-230ENST00000638921 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
GFAP-230ENST00000638921 EHBP1L1Q8N3D4 1523 aa20.37■□□□□ 0.85
GFAP-230ENST00000638921 NAIPQ13075 1403 aa20.37■□□□□ 0.85
GFAP-230ENST00000638921 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
GFAP-230ENST00000638921 HIRIP3Q9BW71 556 aaPredicted RBP20.34■□□□□ 0.85
GFAP-230ENST00000638921 CCER2I3L3R5 266 aa20.33■□□□□ 0.85
GFAP-230ENST00000638921 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
GFAP-230ENST00000638921 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
GFAP-230ENST00000638921 KIF21AQ7Z4S6 1674 aa20.31■□□□□ 0.84
GFAP-230ENST00000638921 ANP32CO43423 234 aa20.3■□□□□ 0.84
GFAP-230ENST00000638921 PRKCSHP14314 528 aaPredicted RBP20.3■□□□□ 0.84
GFAP-230ENST00000638921 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
GFAP-230ENST00000638921 MAGI3Q5TCQ9 1506 aa20.27■□□□□ 0.84
GFAP-230ENST00000638921 TCOF1Q13428 1488 aaKnown RBP20.26■□□□□ 0.83
GFAP-230ENST00000638921 HECW1Q76N89 1606 aa20.23■□□□□ 0.83
GFAP-230ENST00000638921 KDM5BQ9UGL1 1544 aa20.21■□□□□ 0.83
GFAP-230ENST00000638921 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
GFAP-230ENST00000638921 IQGAP2Q13576 1575 aa20.2■□□□□ 0.82
GFAP-230ENST00000638921 AKNAQ7Z591 1439 aa20.2■□□□□ 0.82
GFAP-230ENST00000638921 EPRSP07814 1512 aaKnown RBP20.2■□□□□ 0.82
GFAP-230ENST00000638921 PBRM1Q86U86 1689 aa20.18■□□□□ 0.82
GFAP-230ENST00000638921 CHIC2Q9UKJ5 165 aa20.18■□□□□ 0.82
GFAP-230ENST00000638921 MIA2Q96PC5 1412 aa20.18■□□□□ 0.82
GFAP-230ENST00000638921 GCC2Q8IWJ2 1684 aa20.17■□□□□ 0.82
GFAP-230ENST00000638921 FKBP8Q14318 412 aa20.16■□□□□ 0.82
GFAP-230ENST00000638921 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
GFAP-230ENST00000638921 TRIM52Q96A61 297 aa20.14■□□□□ 0.82
GFAP-230ENST00000638921 DENND4BO75064 1496 aaPredicted RBP20.14■□□□□ 0.81
GFAP-230ENST00000638921 WDR62O43379 1518 aa20.13■□□□□ 0.81
GFAP-230ENST00000638921 CDK13Q14004 1512 aaKnown RBP20.12■□□□□ 0.81
GFAP-230ENST00000638921 NEFLP07196 543 aa20.1■□□□□ 0.81
GFAP-230ENST00000638921 BCANQ96GW7 911 aa20.1■□□□□ 0.81
GFAP-230ENST00000638921 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
GFAP-230ENST00000638921 MPHOSPH9Q99550 1183 aa20.09■□□□□ 0.81
GFAP-230ENST00000638921 KDM6BO15054 1643 aa20.08■□□□□ 0.81
GFAP-230ENST00000638921 HSPA5P11021 654 aaKnown RBP20.07■□□□□ 0.8
GFAP-230ENST00000638921 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
GFAP-230ENST00000638921 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
GFAP-230ENST00000638921 EIF4G2P78344 907 aaKnown RBP eCLIP20.05■□□□□ 0.8
GFAP-230ENST00000638921 RBM19Q9Y4C8 960 aaKnown RBP20.05■□□□□ 0.8
GFAP-230ENST00000638921 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
GFAP-230ENST00000638921 L3MBTL2Q969R5 705 aa20.02■□□□□ 0.79
GFAP-230ENST00000638921 KIAA0586Q9BVV6 1533 aa20.01■□□□□ 0.79
GFAP-230ENST00000638921 DAPK1P53355 1430 aa20.01■□□□□ 0.79
GFAP-230ENST00000638921 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms