RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 TDRD9Q8NDG6 1382 aaKnown RBP4.92□□□□□ -1.62
NEK1-209ENST00000638824 RUSC2Q8N2Y8 1516 aa4.91□□□□□ -1.62
NEK1-209ENST00000638824 GAPVD1Q14C86 1478 aa4.9□□□□□ -1.62
NEK1-209ENST00000638824 CHD1O14646 1710 aa4.9□□□□□ -1.63
NEK1-209ENST00000638824 SNAPC4Q5SXM2 1469 aa4.89□□□□□ -1.63
NEK1-209ENST00000638824 ADAMTS12P58397 1594 aa4.88□□□□□ -1.63
NEK1-209ENST00000638824 GRIN2BQ13224 1484 aa4.88□□□□□ -1.63
NEK1-209ENST00000638824 KIF27Q86VH2 1401 aa4.88□□□□□ -1.63
NEK1-209ENST00000638824 ERICH3Q5RHP9 1530 aa4.87□□□□□ -1.63
NEK1-209ENST00000638824 CUL7Q14999 1698 aa4.86□□□□□ -1.63
NEK1-209ENST00000638824 C1QBPQ07021 282 aaKnown RBP4.86□□□□□ -1.63
NEK1-209ENST00000638824 FAM9AQ8IZU1 332 aaPredicted RBP4.86□□□□□ -1.63
NEK1-209ENST00000638824 MAGI1Q96QZ7 1491 aaPredicted RBP4.86□□□□□ -1.63
NEK1-209ENST00000638824 DNAJC5Q9H3Z4 198 aa4.85□□□□□ -1.63
NEK1-209ENST00000638824 IGF1RP08069 1367 aa4.85□□□□□ -1.63
NEK1-209ENST00000638824 SYNJ2O15056 1496 aa4.85□□□□□ -1.63
NEK1-209ENST00000638824 AMER1Q5JTC6 1135 aaPredicted RBP4.84□□□□□ -1.63
NEK1-209ENST00000638824 FBLN2P98095 1184 aa4.84□□□□□ -1.63
NEK1-209ENST00000638824 GRIN2AQ12879 1464 aa4.84□□□□□ -1.64
NEK1-209ENST00000638824 SLC4A2P04920 1241 aa4.84□□□□□ -1.64
NEK1-209ENST00000638824 CEP170Q5SW79 1584 aa4.83□□□□□ -1.64
NEK1-209ENST00000638824 FHAD1B1AJZ9 1412 aa4.83□□□□□ -1.64
NEK1-209ENST00000638824 U3KPZ7 1027 aaPredicted RBP4.83□□□□□ -1.64
NEK1-209ENST00000638824 EEA1Q15075 1411 aa4.82□□□□□ -1.64
NEK1-209ENST00000638824 CARMIL1Q5VZK9 1371 aa4.82□□□□□ -1.64
NEK1-209ENST00000638824 TIMELESSQ9UNS1 1208 aa4.82□□□□□ -1.64
NEK1-209ENST00000638824 CTTNBP2Q8WZ74 1663 aa4.82□□□□□ -1.64
NEK1-209ENST00000638824 RAPGEF2Q9Y4G8 1499 aa4.82□□□□□ -1.64
NEK1-209ENST00000638824 CHMP7Q8WUX9 453 aaPredicted RBP4.82□□□□□ -1.64
NEK1-209ENST00000638824 KIF21BO75037 1637 aa4.82□□□□□ -1.64
NEK1-209ENST00000638824 PRXQ9BXM0 1461 aa4.82□□□□□ -1.64
NEK1-209ENST00000638824 CLASP1Q7Z460 1538 aa4.81□□□□□ -1.64
NEK1-209ENST00000638824 SPINK5Q9NQ38 1064 aaPredicted RBP4.8□□□□□ -1.64
NEK1-209ENST00000638824 NUP160Q12769 1436 aa4.8□□□□□ -1.64
NEK1-209ENST00000638824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.79□□□□□ -1.64
NEK1-209ENST00000638824 HNRNPUL2Q1KMD3 747 aaKnown RBP4.79□□□□□ -1.64
NEK1-209ENST00000638824 IQGAP2Q13576 1575 aa4.78□□□□□ -1.64
NEK1-209ENST00000638824 OSCARQ8IYS5 282 aa4.78□□□□□ -1.64
NEK1-209ENST00000638824 SLC4A1APQ9BWU0 796 aaKnown RBP4.78□□□□□ -1.64
NEK1-209ENST00000638824 GOLGA3Q08378 1498 aa4.78□□□□□ -1.64
NEK1-209ENST00000638824 ERCC6L2Q5T890 1561 aa4.78□□□□□ -1.64
NEK1-209ENST00000638824 SHROOM2Q13796 1616 aa4.78□□□□□ -1.64
NEK1-209ENST00000638824 KIAA0586Q9BVV6 1533 aa4.76□□□□□ -1.65
NEK1-209ENST00000638824 RIMBP3CA6NJZ7 1639 aa4.76□□□□□ -1.65
NEK1-209ENST00000638824 RIMBP3BA6NNM3 1639 aa4.76□□□□□ -1.65
NEK1-209ENST00000638824 RIMBP3Q9UFD9 1639 aa4.76□□□□□ -1.65
NEK1-209ENST00000638824 RANGAP1P46060 587 aaPredicted RBP4.76□□□□□ -1.65
NEK1-209ENST00000638824 ARHGEF11O15085 1522 aa4.76□□□□□ -1.65
NEK1-209ENST00000638824 LOC105371045A0A1W2PR82 267 aa4.75□□□□□ -1.65
NEK1-209ENST00000638824 UBTFP17480 764 aaKnown RBP4.74□□□□□ -1.65
NEK1-209ENST00000638824 KIAA0556O60303 1618 aa4.74□□□□□ -1.65
NEK1-209ENST00000638824 PRG4Q92954 1404 aaPredicted RBP4.74□□□□□ -1.65
NEK1-209ENST00000638824 DISP1Q96F81 1524 aa4.74□□□□□ -1.65
NEK1-209ENST00000638824 UGGT2Q9NYU1 1516 aa4.74□□□□□ -1.65
NEK1-209ENST00000638824 SAMD9Q5K651 1589 aa4.74□□□□□ -1.65
NEK1-209ENST00000638824 DSG3P32926 999 aa4.73□□□□□ -1.65
NEK1-209ENST00000638824 JPH4Q96JJ6 628 aa4.73□□□□□ -1.65
NEK1-209ENST00000638824 ARAP1Q96P48 1450 aa4.72□□□□□ -1.65
NEK1-209ENST00000638824 TULP1O00294 542 aaPredicted RBP4.72□□□□□ -1.65
NEK1-209ENST00000638824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.72□□□□□ -1.65
NEK1-209ENST00000638824 TTBK1Q5TCY1 1321 aaPredicted RBP4.72□□□□□ -1.65
NEK1-209ENST00000638824 P3H3Q8IVL6 736 aa4.71□□□□□ -1.65
NEK1-209ENST00000638824 TNIKQ9UKE5 1360 aa4.71□□□□□ -1.66
NEK1-209ENST00000638824 ARHGAP35Q9NRY4 1499 aa4.71□□□□□ -1.66
NEK1-209ENST00000638824 FHOD3Q2V2M9 1422 aa4.71□□□□□ -1.66
NEK1-209ENST00000638824 CEP162Q5TB80 1403 aa4.71□□□□□ -1.66
NEK1-209ENST00000638824 EFCAB5A4FU69 1503 aa4.71□□□□□ -1.66
NEK1-209ENST00000638824 TAOK2Q9UL54 1235 aa4.7□□□□□ -1.66
NEK1-209ENST00000638824 CARMIL2Q6F5E8 1435 aa4.7□□□□□ -1.66
NEK1-209ENST00000638824 CLIP1P30622 1438 aa4.7□□□□□ -1.66
NEK1-209ENST00000638824 ADCY10Q96PN6 1610 aa4.69□□□□□ -1.66
NEK1-209ENST00000638824 LRRIQ1Q96JM4 1722 aa4.69□□□□□ -1.66
NEK1-209ENST00000638824 PCF11O94913 1555 aaKnown RBP4.68□□□□□ -1.66
NEK1-209ENST00000638824 PLB1Q6P1J6 1458 aa4.68□□□□□ -1.66
NEK1-209ENST00000638824 CYB5RLQ6IPT4 315 aa4.68□□□□□ -1.66
NEK1-209ENST00000638824 RAPGEF6Q8TEU7 1601 aa4.67□□□□□ -1.66
NEK1-209ENST00000638824 PTPRGP23470 1445 aa4.67□□□□□ -1.66
NEK1-209ENST00000638824 ABCA8O94911 1581 aa4.67□□□□□ -1.66
NEK1-209ENST00000638824 ZCCHC11Q5TAX3 1644 aaKnown RBP4.66□□□□□ -1.66
NEK1-209ENST00000638824 ABCC2Q92887 1545 aa4.66□□□□□ -1.66
NEK1-209ENST00000638824 SAMD1Q6SPF0 538 aaPredicted RBP4.66□□□□□ -1.66
NEK1-209ENST00000638824 ARID3CA6NKF2 412 aa4.66□□□□□ -1.66
NEK1-209ENST00000638824 TPRNQ4KMQ1 711 aa4.66□□□□□ -1.66
NEK1-209ENST00000638824 UACAQ9BZF9 1416 aa4.65□□□□□ -1.66
NEK1-209ENST00000638824 HECW1Q76N89 1606 aa4.65□□□□□ -1.67
NEK1-209ENST00000638824 CDK13Q14004 1512 aaKnown RBP4.65□□□□□ -1.67
NEK1-209ENST00000638824 NUP153P49790 1475 aaKnown RBP4.65□□□□□ -1.67
NEK1-209ENST00000638824 ZBTB22O15209 634 aa4.64□□□□□ -1.67
NEK1-209ENST00000638824 KLHL34Q8N239 644 aa4.64□□□□□ -1.67
NEK1-209ENST00000638824 FMN1Q68DA7 1419 aa4.64□□□□□ -1.67
NEK1-209ENST00000638824 ARXQ96QS3 562 aa4.64□□□□□ -1.67
NEK1-209ENST00000638824 UHRF1BP1LA0JNW5 1464 aa4.64□□□□□ -1.67
NEK1-209ENST00000638824 FYCO1Q9BQS8 1478 aa4.63□□□□□ -1.67
NEK1-209ENST00000638824 ATF5Q9Y2D1 282 aaPredicted RBP4.63□□□□□ -1.67
NEK1-209ENST00000638824 VPS8Q8N3P4 1428 aa4.63□□□□□ -1.67
NEK1-209ENST00000638824 CFAP43Q8NDM7 1665 aa4.63□□□□□ -1.67
NEK1-209ENST00000638824 ATP1B4Q9UN42 357 aaPredicted RBP4.63□□□□□ -1.67
NEK1-209ENST00000638824 KDM5BQ9UGL1 1544 aa4.63□□□□□ -1.67
NEK1-209ENST00000638824 CASKIN1Q8WXD9 1431 aa4.62□□□□□ -1.67
NEK1-209ENST00000638824 EPRSP07814 1512 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms