RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
GFAP-228ENST00000638488 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
GFAP-228ENST00000638488 POLA1P09884 1462 aaPredicted RBP17.41■□□□□ 0.38
GFAP-228ENST00000638488 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
GFAP-228ENST00000638488 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
GFAP-228ENST00000638488 ARHGAP35Q9NRY4 1499 aa17.39■□□□□ 0.38
GFAP-228ENST00000638488 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
GFAP-228ENST00000638488 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
GFAP-228ENST00000638488 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
GFAP-228ENST00000638488 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
GFAP-228ENST00000638488 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
GFAP-228ENST00000638488 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
GFAP-228ENST00000638488 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
GFAP-228ENST00000638488 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
GFAP-228ENST00000638488 FANCIQ9NVI1 1328 aa17.26■□□□□ 0.35
GFAP-228ENST00000638488 MSH5O43196 834 aa17.25■□□□□ 0.35
GFAP-228ENST00000638488 ITGAEP38570 1179 aa17.24■□□□□ 0.35
GFAP-228ENST00000638488 FKBP8Q14318 412 aa17.21■□□□□ 0.35
GFAP-228ENST00000638488 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
GFAP-228ENST00000638488 BCANQ96GW7 911 aa17.19■□□□□ 0.34
GFAP-228ENST00000638488 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
GFAP-228ENST00000638488 CUL7Q14999 1698 aa17.18■□□□□ 0.34
GFAP-228ENST00000638488 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
GFAP-228ENST00000638488 NEFLP07196 543 aa17.15■□□□□ 0.34
GFAP-228ENST00000638488 TIAM1Q13009 1591 aa17.14■□□□□ 0.33
GFAP-228ENST00000638488 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
GFAP-228ENST00000638488 ERICH6BQ5W0A0 696 aa17.13■□□□□ 0.33
GFAP-228ENST00000638488 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
GFAP-228ENST00000638488 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
GFAP-228ENST00000638488 PCF11O94913 1555 aaKnown RBP17.12■□□□□ 0.33
GFAP-228ENST00000638488 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
GFAP-228ENST00000638488 CTTNBP2Q8WZ74 1663 aa17.11■□□□□ 0.33
GFAP-228ENST00000638488 SLC24A1O60721 1099 aa17.11■□□□□ 0.33
GFAP-228ENST00000638488 DEKP35659 375 aaKnown RBP17.1■□□□□ 0.33
GFAP-228ENST00000638488 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.33
GFAP-228ENST00000638488 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.32
GFAP-228ENST00000638488 FAM50AQ14320 339 aaKnown RBP17.07■□□□□ 0.32
GFAP-228ENST00000638488 ANO8Q9HCE9 1232 aaPredicted RBP17.06■□□□□ 0.32
GFAP-228ENST00000638488 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
GFAP-228ENST00000638488 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
GFAP-228ENST00000638488 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
GFAP-228ENST00000638488 PHLDB1Q86UU1 1377 aa17.05■□□□□ 0.32
GFAP-228ENST00000638488 DHX57Q6P158 1386 aaKnown RBP17.03■□□□□ 0.32
GFAP-228ENST00000638488 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
GFAP-228ENST00000638488 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
GFAP-228ENST00000638488 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
GFAP-228ENST00000638488 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
GFAP-228ENST00000638488 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
GFAP-228ENST00000638488 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
GFAP-228ENST00000638488 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
GFAP-228ENST00000638488 ERCC6Q03468 1493 aa16.96■□□□□ 0.31
GFAP-228ENST00000638488 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
GFAP-228ENST00000638488 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
GFAP-228ENST00000638488 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
GFAP-228ENST00000638488 RAB3GAP2Q9H2M9 1393 aa16.94■□□□□ 0.3
GFAP-228ENST00000638488 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
GFAP-228ENST00000638488 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
GFAP-228ENST00000638488 UBE2Q2Q8WVN8 375 aa16.93■□□□□ 0.3
GFAP-228ENST00000638488 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
GFAP-228ENST00000638488 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
GFAP-228ENST00000638488 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
GFAP-228ENST00000638488 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
GFAP-228ENST00000638488 SALL2Q9Y467 1007 aaPredicted RBP16.88■□□□□ 0.29
GFAP-228ENST00000638488 WDR62O43379 1518 aa16.88■□□□□ 0.29
GFAP-228ENST00000638488 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
GFAP-228ENST00000638488 IQGAP2Q13576 1575 aa16.86■□□□□ 0.29
GFAP-228ENST00000638488 CCER2I3L3R5 266 aa16.86■□□□□ 0.29
GFAP-228ENST00000638488 LRRIQ1Q96JM4 1722 aa16.86■□□□□ 0.29
GFAP-228ENST00000638488 FBLN2P98095 1184 aa16.85■□□□□ 0.29
GFAP-228ENST00000638488 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
GFAP-228ENST00000638488 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
GFAP-228ENST00000638488 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
GFAP-228ENST00000638488 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
GFAP-228ENST00000638488 NOP58Q9Y2X3 529 aaKnown RBP16.78■□□□□ 0.28
GFAP-228ENST00000638488 SIN3AQ96ST3 1273 aa16.77■□□□□ 0.27
GFAP-228ENST00000638488 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
GFAP-228ENST00000638488 CDK13Q14004 1512 aaKnown RBP16.76■□□□□ 0.27
GFAP-228ENST00000638488 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
GFAP-228ENST00000638488 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
GFAP-228ENST00000638488 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
GFAP-228ENST00000638488 GRIN2AQ12879 1464 aa16.74■□□□□ 0.27
GFAP-228ENST00000638488 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
GFAP-228ENST00000638488 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
GFAP-228ENST00000638488 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
GFAP-228ENST00000638488 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
GFAP-228ENST00000638488 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
GFAP-228ENST00000638488 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
GFAP-228ENST00000638488 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
GFAP-228ENST00000638488 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
GFAP-228ENST00000638488 CHIC2Q9UKJ5 165 aa16.72■□□□□ 0.27
GFAP-228ENST00000638488 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
GFAP-228ENST00000638488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.71■□□□□ 0.27
GFAP-228ENST00000638488 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
GFAP-228ENST00000638488 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
GFAP-228ENST00000638488 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
GFAP-228ENST00000638488 CCDC136Q96JN2 1154 aa16.68■□□□□ 0.26
GFAP-228ENST00000638488 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
GFAP-228ENST00000638488 KIAA0556O60303 1618 aa16.68■□□□□ 0.26
GFAP-228ENST00000638488 NBR1Q14596 966 aa16.67■□□□□ 0.26
GFAP-228ENST00000638488 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms