RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 GOLGA3Q08378 1498 aa31.91■■■□□ 2.7
HLA-A-209ENST00000638375 EHMT2Q96KQ7 1210 aa31.89■■■□□ 2.7
HLA-A-209ENST00000638375 CTTNBP2Q8WZ74 1663 aa31.84■■■□□ 2.69
HLA-A-209ENST00000638375 SHROOM2Q13796 1616 aa31.83■■■□□ 2.69
HLA-A-209ENST00000638375 IQGAP2Q13576 1575 aa31.83■■■□□ 2.69
HLA-A-209ENST00000638375 JPH4Q96JJ6 628 aa31.8■■■□□ 2.68
HLA-A-209ENST00000638375 UBTFP17480 764 aaKnown RBP31.75■■■□□ 2.67
HLA-A-209ENST00000638375 ARHGEF11O15085 1522 aa31.74■■■□□ 2.67
HLA-A-209ENST00000638375 PRG4Q92954 1404 aaPredicted RBP31.72■■■□□ 2.67
HLA-A-209ENST00000638375 ERCC6L2Q5T890 1561 aa31.71■■■□□ 2.67
HLA-A-209ENST00000638375 UGGT2Q9NYU1 1516 aa31.7■■■□□ 2.66
HLA-A-209ENST00000638375 RIMBP3CA6NJZ7 1639 aa31.68■■■□□ 2.66
HLA-A-209ENST00000638375 RIMBP3BA6NNM3 1639 aa31.68■■■□□ 2.66
HLA-A-209ENST00000638375 RIMBP3Q9UFD9 1639 aa31.68■■■□□ 2.66
HLA-A-209ENST00000638375 LOC105371045A0A1W2PR82 267 aa31.64■■■□□ 2.66
HLA-A-209ENST00000638375 DISP1Q96F81 1524 aa31.61■■■□□ 2.65
HLA-A-209ENST00000638375 TNIKQ9UKE5 1360 aa31.59■■■□□ 2.65
HLA-A-209ENST00000638375 CARMIL2Q6F5E8 1435 aa31.56■■■□□ 2.64
HLA-A-209ENST00000638375 KIAA0556O60303 1618 aa31.55■■■□□ 2.64
HLA-A-209ENST00000638375 ARAP1Q96P48 1450 aa31.54■■■□□ 2.64
HLA-A-209ENST00000638375 RANGAP1P46060 587 aaPredicted RBP31.54■■■□□ 2.64
HLA-A-209ENST00000638375 SAMD9Q5K651 1589 aa31.51■■■□□ 2.63
HLA-A-209ENST00000638375 EFCAB5A4FU69 1503 aa31.43■■■□□ 2.62
HLA-A-209ENST00000638375 P3H3Q8IVL6 736 aa31.42■■■□□ 2.62
HLA-A-209ENST00000638375 ARHGAP35Q9NRY4 1499 aa31.4■■■□□ 2.62
HLA-A-209ENST00000638375 CYB5RLQ6IPT4 315 aa31.4■■■□□ 2.62
HLA-A-209ENST00000638375 PTPRGP23470 1445 aa31.39■■■□□ 2.62
HLA-A-209ENST00000638375 FHOD3Q2V2M9 1422 aa31.36■■■□□ 2.61
HLA-A-209ENST00000638375 TTBK1Q5TCY1 1321 aaPredicted RBP31.36■■■□□ 2.61
HLA-A-209ENST00000638375 CLIP1P30622 1438 aa31.35■■■□□ 2.61
HLA-A-209ENST00000638375 CEP162Q5TB80 1403 aa31.34■■■□□ 2.61
HLA-A-209ENST00000638375 PLB1Q6P1J6 1458 aa31.21■■■□□ 2.59
HLA-A-209ENST00000638375 UACAQ9BZF9 1416 aa31.2■■■□□ 2.59
HLA-A-209ENST00000638375 ABCA8O94911 1581 aa31.17■■■□□ 2.58
HLA-A-209ENST00000638375 ADCY10Q96PN6 1610 aa31.17■■■□□ 2.58
HLA-A-209ENST00000638375 UHRF1BP1LA0JNW5 1464 aa31.14■■■□□ 2.58
HLA-A-209ENST00000638375 ABCC2Q92887 1545 aa31.14■■■□□ 2.58
HLA-A-209ENST00000638375 FMN1Q68DA7 1419 aa31.13■■■□□ 2.57
HLA-A-209ENST00000638375 RAPGEF6Q8TEU7 1601 aa31.09■■■□□ 2.57
HLA-A-209ENST00000638375 NUP153P49790 1475 aaKnown RBP31.01■■■□□ 2.55
HLA-A-209ENST00000638375 KDM5BQ9UGL1 1544 aa31■■■□□ 2.55
HLA-A-209ENST00000638375 PCF11O94913 1555 aaKnown RBP30.98■■■□□ 2.55
HLA-A-209ENST00000638375 CASKIN1Q8WXD9 1431 aa30.97■■■□□ 2.55
HLA-A-209ENST00000638375 NPM1P06748 294 aaKnown RBP eCLIP30.95■■■□□ 2.55
HLA-A-209ENST00000638375 ARID3CA6NKF2 412 aa30.94■■■□□ 2.54
HLA-A-209ENST00000638375 HECW1Q76N89 1606 aa30.94■■■□□ 2.54
HLA-A-209ENST00000638375 ZCCHC11Q5TAX3 1644 aaKnown RBP30.93■■■□□ 2.54
HLA-A-209ENST00000638375 VPS8Q8N3P4 1428 aa30.92■■■□□ 2.54
HLA-A-209ENST00000638375 ATP10BO94823 1461 aa30.92■■■□□ 2.54
HLA-A-209ENST00000638375 FYCO1Q9BQS8 1478 aa30.91■■■□□ 2.54
HLA-A-209ENST00000638375 ATP1B4Q9UN42 357 aaPredicted RBP30.9■■■□□ 2.54
HLA-A-209ENST00000638375 MAPKBP1O60336 1514 aa30.86■■■□□ 2.53
HLA-A-209ENST00000638375 EPRSP07814 1512 aaKnown RBP30.86■■■□□ 2.53
HLA-A-209ENST00000638375 CDK13Q14004 1512 aaKnown RBP30.84■■■□□ 2.53
HLA-A-209ENST00000638375 LRRIQ1Q96JM4 1722 aa30.83■■■□□ 2.53
HLA-A-209ENST00000638375 ASXL2Q76L83 1435 aa30.81■■■□□ 2.52
HLA-A-209ENST00000638375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.79■■■□□ 2.52
HLA-A-209ENST00000638375 HNRNPUL2Q1KMD3 747 aaKnown RBP30.79■■■□□ 2.52
HLA-A-209ENST00000638375 CCDC18Q5T9S5 1454 aa30.76■■■□□ 2.52
HLA-A-209ENST00000638375 WDR7Q9Y4E6 1490 aa30.73■■■□□ 2.51
HLA-A-209ENST00000638375 ABCC10Q5T3U5 1492 aa30.67■■■□□ 2.5
HLA-A-209ENST00000638375 PLEKHD1A6NEE1 506 aa30.65■■■□□ 2.5
HLA-A-209ENST00000638375 DIP2BQ9P265 1576 aa30.63■■■□□ 2.49
HLA-A-209ENST00000638375 MAGI3Q5TCQ9 1506 aa30.63■■■□□ 2.49
HLA-A-209ENST00000638375 CDK11AQ9UQ88 783 aaPredicted RBP30.62■■■□□ 2.49
HLA-A-209ENST00000638375 CFAP43Q8NDM7 1665 aa30.62■■■□□ 2.49
HLA-A-209ENST00000638375 TIAM1Q13009 1591 aa30.61■■■□□ 2.49
HLA-A-209ENST00000638375 TROQ12816 1431 aaPredicted RBP30.59■■■□□ 2.49
HLA-A-209ENST00000638375 KCNH8Q96L42 1107 aa30.59■■■□□ 2.49
HLA-A-209ENST00000638375 TRHP20396 242 aaPredicted RBP30.57■■■□□ 2.48
HLA-A-209ENST00000638375 FAM69CQ0P6D2 419 aa30.57■■■□□ 2.48
HLA-A-209ENST00000638375 MAP3K1Q13233 1512 aa30.57■■■□□ 2.48
HLA-A-209ENST00000638375 KIF13AQ9H1H9 1805 aa30.56■■■□□ 2.48
HLA-A-209ENST00000638375 GLI2P10070 1586 aa30.55■■■□□ 2.48
HLA-A-209ENST00000638375 MTUS2Q5JR59 1369 aa30.51■■■□□ 2.47
HLA-A-209ENST00000638375 APLP2Q06481 763 aa30.49■■■□□ 2.47
HLA-A-209ENST00000638375 EHBP1L1Q8N3D4 1523 aa30.48■■■□□ 2.47
HLA-A-209ENST00000638375 KIF14Q15058 1648 aa30.48■■■□□ 2.47
HLA-A-209ENST00000638375 LRRC9Q6ZRR7 1453 aa30.47■■■□□ 2.47
HLA-A-209ENST00000638375 KANK4Q5T7N3 995 aaPredicted RBP30.47■■■□□ 2.47
HLA-A-209ENST00000638375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.46■■■□□ 2.47
HLA-A-209ENST00000638375 ABCA9Q8IUA7 1624 aa30.45■■■□□ 2.47
HLA-A-209ENST00000638375 MAP3K4Q9Y6R4 1608 aa30.43■■■□□ 2.46
HLA-A-209ENST00000638375 TTC37Q6PGP7 1564 aa30.42■■■□□ 2.46
HLA-A-209ENST00000638375 CD109Q6YHK3 1445 aa30.39■■■□□ 2.45
HLA-A-209ENST00000638375 PPRC1Q5VV67 1664 aaKnown RBP30.33■■■□□ 2.45
HLA-A-209ENST00000638375 NCOA2Q15596 1464 aa30.31■■■□□ 2.44
HLA-A-209ENST00000638375 SUPT6HQ7KZ85 1726 aaKnown RBP30.31■■■□□ 2.44
HLA-A-209ENST00000638375 TSPOAP1O95153 1857 aa30.31■■■□□ 2.44
HLA-A-209ENST00000638375 PLCH2O75038 1416 aa30.27■■■□□ 2.44
HLA-A-209ENST00000638375 MYO5CQ9NQX4 1742 aa30.25■■■□□ 2.43
HLA-A-209ENST00000638375 GPATCH8Q9UKJ3 1502 aaKnown RBP30.24■■■□□ 2.43
HLA-A-209ENST00000638375 PPARGC1BQ86YN6 1023 aaKnown RBP30.23■■■□□ 2.43
HLA-A-209ENST00000638375 CCNB3Q8WWL7 1395 aa30.23■■■□□ 2.43
HLA-A-209ENST00000638375 TEX14Q8IWB6 1497 aa30.22■■■□□ 2.43
HLA-A-209ENST00000638375 CDC42BPAQ5VT25 1732 aa30.22■■■□□ 2.43
HLA-A-209ENST00000638375 PREX2Q70Z35 1606 aa30.22■■■□□ 2.43
HLA-A-209ENST00000638375 ARAP3Q8WWN8 1544 aa30.22■■■□□ 2.43
HLA-A-209ENST00000638375 CDC42BPBQ9Y5S2 1711 aa30.18■■■□□ 2.42
HLA-A-209ENST00000638375 FANCAO15360 1455 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms