RNA–Protein interactions for RNA: ENST00000638230.1

HNRNPU-212, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-212ENST00000638230 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
HNRNPU-212ENST00000638230 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
HNRNPU-212ENST00000638230 ITGAEP38570 1179 aa17.42■□□□□ 0.38
HNRNPU-212ENST00000638230 BCL11AQ9H165 835 aa17.4■□□□□ 0.38
HNRNPU-212ENST00000638230 CFAP43Q8NDM7 1665 aa17.4■□□□□ 0.38
HNRNPU-212ENST00000638230 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.37
HNRNPU-212ENST00000638230 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
HNRNPU-212ENST00000638230 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
HNRNPU-212ENST00000638230 RBM19Q9Y4C8 960 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-212ENST00000638230 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
HNRNPU-212ENST00000638230 ANP32CO43423 234 aa17.33■□□□□ 0.37
HNRNPU-212ENST00000638230 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.36
HNRNPU-212ENST00000638230 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
HNRNPU-212ENST00000638230 CFTRP13569 1480 aa17.31■□□□□ 0.36
HNRNPU-212ENST00000638230 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
HNRNPU-212ENST00000638230 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
HNRNPU-212ENST00000638230 PCF11O94913 1555 aaKnown RBP17.28■□□□□ 0.36
HNRNPU-212ENST00000638230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.36
HNRNPU-212ENST00000638230 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
HNRNPU-212ENST00000638230 IGF1RP08069 1367 aa17.24■□□□□ 0.35
HNRNPU-212ENST00000638230 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
HNRNPU-212ENST00000638230 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
HNRNPU-212ENST00000638230 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
HNRNPU-212ENST00000638230 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
HNRNPU-212ENST00000638230 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
HNRNPU-212ENST00000638230 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
HNRNPU-212ENST00000638230 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.341e-7■■■■□ 25.3
HNRNPU-212ENST00000638230 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
HNRNPU-212ENST00000638230 CCDC18Q5T9S5 1454 aa17.14■□□□□ 0.33
HNRNPU-212ENST00000638230 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
HNRNPU-212ENST00000638230 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
HNRNPU-212ENST00000638230 ERICH6BQ5W0A0 696 aa17.13■□□□□ 0.33
HNRNPU-212ENST00000638230 UACAQ9BZF9 1416 aa17.13■□□□□ 0.33
HNRNPU-212ENST00000638230 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-212ENST00000638230 MSH5O43196 834 aa17.11■□□□□ 0.33
HNRNPU-212ENST00000638230 ERICH6Q7L0X2 663 aa17.11■□□□□ 0.33
HNRNPU-212ENST00000638230 HFM1A2PYH4 1435 aa17.1■□□□□ 0.33
HNRNPU-212ENST00000638230 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
HNRNPU-212ENST00000638230 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
HNRNPU-212ENST00000638230 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
HNRNPU-212ENST00000638230 HNRNPUQ00839 825 aaKnown RBP eCLIP17.07■□□□□ 0.32
HNRNPU-212ENST00000638230 FHOD3Q2V2M9 1422 aa17.07■□□□□ 0.32
HNRNPU-212ENST00000638230 CTTNBP2Q8WZ74 1663 aa17.06■□□□□ 0.32
HNRNPU-212ENST00000638230 CC2D2AQ9P2K1 1620 aa17.04■□□□□ 0.32
HNRNPU-212ENST00000638230 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
HNRNPU-212ENST00000638230 CUL7Q14999 1698 aa17.03■□□□□ 0.32
HNRNPU-212ENST00000638230 KDM5BQ9UGL1 1544 aa17.03■□□□□ 0.32
HNRNPU-212ENST00000638230 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.31
HNRNPU-212ENST00000638230 NCOA2Q15596 1464 aa17.01■□□□□ 0.31
HNRNPU-212ENST00000638230 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
HNRNPU-212ENST00000638230 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
HNRNPU-212ENST00000638230 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
HNRNPU-212ENST00000638230 NAIPQ13075 1403 aa16.98■□□□□ 0.31
HNRNPU-212ENST00000638230 P3H3Q8IVL6 736 aa16.98■□□□□ 0.31
HNRNPU-212ENST00000638230 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
HNRNPU-212ENST00000638230 HECW1Q76N89 1606 aa16.97■□□□□ 0.31
HNRNPU-212ENST00000638230 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
HNRNPU-212ENST00000638230 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
HNRNPU-212ENST00000638230 PTPRKQ15262 1439 aa16.96■□□□□ 0.31
HNRNPU-212ENST00000638230 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.31
HNRNPU-212ENST00000638230 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.31
HNRNPU-212ENST00000638230 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
HNRNPU-212ENST00000638230 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
HNRNPU-212ENST00000638230 IRX6P78412 446 aaPredicted RBP16.94■□□□□ 0.3
HNRNPU-212ENST00000638230 EHBP1L1Q8N3D4 1523 aa16.94■□□□□ 0.3
HNRNPU-212ENST00000638230 WASHC2AQ641Q2 1341 aa16.93■□□□□ 0.3
HNRNPU-212ENST00000638230 DNMBPQ6XZF7 1577 aa16.93■□□□□ 0.3
HNRNPU-212ENST00000638230 SAMD9Q5K651 1589 aa16.91■□□□□ 0.3
HNRNPU-212ENST00000638230 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-212ENST00000638230 KIF21AQ7Z4S6 1674 aa16.9■□□□□ 0.3
HNRNPU-212ENST00000638230 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.3
HNRNPU-212ENST00000638230 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.29
HNRNPU-212ENST00000638230 AKNAQ7Z591 1439 aa16.89■□□□□ 0.29
HNRNPU-212ENST00000638230 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
HNRNPU-212ENST00000638230 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
HNRNPU-212ENST00000638230 UGGT2Q9NYU1 1516 aa16.87■□□□□ 0.29
HNRNPU-212ENST00000638230 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
HNRNPU-212ENST00000638230 NCOA1Q15788 1441 aa16.86■□□□□ 0.29
HNRNPU-212ENST00000638230 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-212ENST00000638230 ARHGEF11O15085 1522 aa16.85■□□□□ 0.29
HNRNPU-212ENST00000638230 POLR1AO95602 1720 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-212ENST00000638230 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
HNRNPU-212ENST00000638230 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.29
HNRNPU-212ENST00000638230 CCDC7Q96M83 1385 aa16.83■□□□□ 0.28
HNRNPU-212ENST00000638230 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
HNRNPU-212ENST00000638230 PRKRIP1Q9H875 184 aaPredicted RBP16.82■□□□□ 0.28
HNRNPU-212ENST00000638230 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
HNRNPU-212ENST00000638230 DENND4BO75064 1496 aaPredicted RBP16.8■□□□□ 0.28
HNRNPU-212ENST00000638230 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
HNRNPU-212ENST00000638230 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-212ENST00000638230 DEKP35659 375 aaKnown RBP16.79■□□□□ 0.28
HNRNPU-212ENST00000638230 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
HNRNPU-212ENST00000638230 CCDC184Q52MB2 194 aa16.76■□□□□ 0.27
HNRNPU-212ENST00000638230 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
HNRNPU-212ENST00000638230 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
HNRNPU-212ENST00000638230 KDM6BO15054 1643 aa16.73■□□□□ 0.27
HNRNPU-212ENST00000638230 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
HNRNPU-212ENST00000638230 MAGI3Q5TCQ9 1506 aa16.73■□□□□ 0.27
HNRNPU-212ENST00000638230 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
HNRNPU-212ENST00000638230 RPRD2Q5VT52 1461 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms