RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
TCF4-289ENST00000637941 URB2Q14146 1524 aaKnown RBP18.65■□□□□ 0.58
TCF4-289ENST00000637941 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.58
TCF4-289ENST00000637941 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
TCF4-289ENST00000637941 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
TCF4-289ENST00000637941 MIER1Q8N108 512 aa18.62■□□□□ 0.57
TCF4-289ENST00000637941 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
TCF4-289ENST00000637941 CFAP43Q8NDM7 1665 aa18.62■□□□□ 0.57
TCF4-289ENST00000637941 CUL7Q14999 1698 aa18.58■□□□□ 0.56
TCF4-289ENST00000637941 LRRC9Q6ZRR7 1453 aa18.57■□□□□ 0.56
TCF4-289ENST00000637941 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
TCF4-289ENST00000637941 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
TCF4-289ENST00000637941 CTTNBP2Q8WZ74 1663 aa18.52■□□□□ 0.56
TCF4-289ENST00000637941 PCF11O94913 1555 aaKnown RBP18.52■□□□□ 0.55
TCF4-289ENST00000637941 WDR97A6NE52 1622 aa18.51■□□□□ 0.55
TCF4-289ENST00000637941 FYCO1Q9BQS8 1478 aa18.51■□□□□ 0.55
TCF4-289ENST00000637941 AQRO60306 1485 aaKnown RBP eCLIP18.49■□□□□ 0.55
TCF4-289ENST00000637941 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
TCF4-289ENST00000637941 SETD5Q9C0A6 1442 aa18.48■□□□□ 0.55
TCF4-289ENST00000637941 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
TCF4-289ENST00000637941 CASKIN1Q8WXD9 1431 aa18.45■□□□□ 0.54
TCF4-289ENST00000637941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.44■□□□□ 0.54
TCF4-289ENST00000637941 ABCA5Q8WWZ7 1642 aa18.44■□□□□ 0.54
TCF4-289ENST00000637941 ITGAEP38570 1179 aa18.43■□□□□ 0.54
TCF4-289ENST00000637941 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
TCF4-289ENST00000637941 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
TCF4-289ENST00000637941 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
TCF4-289ENST00000637941 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
TCF4-289ENST00000637941 FMN1Q68DA7 1419 aa18.41■□□□□ 0.54
TCF4-289ENST00000637941 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
TCF4-289ENST00000637941 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
TCF4-289ENST00000637941 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
TCF4-289ENST00000637941 FAM50AQ14320 339 aaKnown RBP18.35■□□□□ 0.53
TCF4-289ENST00000637941 WDR62O43379 1518 aa18.33■□□□□ 0.53
TCF4-289ENST00000637941 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
TCF4-289ENST00000637941 SAMD9Q5K651 1589 aa18.32■□□□□ 0.52
TCF4-289ENST00000637941 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
TCF4-289ENST00000637941 P3H3Q8IVL6 736 aa18.31■□□□□ 0.52
TCF4-289ENST00000637941 ATP1B4Q9UN42 357 aaPredicted RBP18.31■□□□□ 0.52
TCF4-289ENST00000637941 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
TCF4-289ENST00000637941 IFT140Q96RY7 1462 aa18.29■□□□□ 0.52
TCF4-289ENST00000637941 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
TCF4-289ENST00000637941 PBRM1Q86U86 1689 aa18.27■□□□□ 0.52
TCF4-289ENST00000637941 MTUS2Q5JR59 1369 aa18.24■□□□□ 0.51
TCF4-289ENST00000637941 SUPT6HQ7KZ85 1726 aaKnown RBP18.24■□□□□ 0.51
TCF4-289ENST00000637941 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
TCF4-289ENST00000637941 EHBP1L1Q8N3D4 1523 aa18.22■□□□□ 0.51
TCF4-289ENST00000637941 LRRIQ1Q96JM4 1722 aa18.19■□□□□ 0.5
TCF4-289ENST00000637941 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
TCF4-289ENST00000637941 CCDC18Q5T9S5 1454 aa18.18■□□□□ 0.5
TCF4-289ENST00000637941 HFM1A2PYH4 1435 aa18.18■□□□□ 0.5
TCF4-289ENST00000637941 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
TCF4-289ENST00000637941 MYT1Q01538 1121 aa18.17■□□□□ 0.5
TCF4-289ENST00000637941 MYOM3Q5VTT5 1437 aa18.17■□□□□ 0.5
TCF4-289ENST00000637941 PTPN23Q9H3S7 1636 aa18.17■□□□□ 0.5
TCF4-289ENST00000637941 UACAQ9BZF9 1416 aa18.16■□□□□ 0.5
TCF4-289ENST00000637941 NCOA2Q15596 1464 aa18.15■□□□□ 0.5
TCF4-289ENST00000637941 SIN3AQ96ST3 1273 aa18.14■□□□□ 0.5
TCF4-289ENST00000637941 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
TCF4-289ENST00000637941 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
TCF4-289ENST00000637941 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
TCF4-289ENST00000637941 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
TCF4-289ENST00000637941 UGGT2Q9NYU1 1516 aa18.11■□□□□ 0.49
TCF4-289ENST00000637941 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
TCF4-289ENST00000637941 IQGAP2Q13576 1575 aa18.07■□□□□ 0.48
TCF4-289ENST00000637941 GCC2Q8IWJ2 1684 aa18.07■□□□□ 0.48
TCF4-289ENST00000637941 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
TCF4-289ENST00000637941 NAIPQ13075 1403 aa18.06■□□□□ 0.48
TCF4-289ENST00000637941 TCOF1Q13428 1488 aaKnown RBP18.06■□□□□ 0.48
TCF4-289ENST00000637941 AKNAQ7Z591 1439 aa18.05■□□□□ 0.48
TCF4-289ENST00000637941 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
TCF4-289ENST00000637941 DDX10Q13206 875 aaKnown RBP18.04■□□□□ 0.48
TCF4-289ENST00000637941 CCER2I3L3R5 266 aa18.03■□□□□ 0.48
TCF4-289ENST00000637941 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
TCF4-289ENST00000637941 MIA2Q96PC5 1412 aa18■□□□□ 0.47
TCF4-289ENST00000637941 ANP32CO43423 234 aa18■□□□□ 0.47
TCF4-289ENST00000637941 GRIN2AQ12879 1464 aa18■□□□□ 0.47
TCF4-289ENST00000637941 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
TCF4-289ENST00000637941 MAGI3Q5TCQ9 1506 aa17.99■□□□□ 0.47
TCF4-289ENST00000637941 KIAA0586Q9BVV6 1533 aa17.97■□□□□ 0.47
TCF4-289ENST00000637941 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
TCF4-289ENST00000637941 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
TCF4-289ENST00000637941 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
TCF4-289ENST00000637941 KDM5BQ9UGL1 1544 aa17.89■□□□□ 0.46
TCF4-289ENST00000637941 FBLN2P98095 1184 aa17.89■□□□□ 0.45
TCF4-289ENST00000637941 CDK13Q14004 1512 aaKnown RBP17.87■□□□□ 0.45
TCF4-289ENST00000637941 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
TCF4-289ENST00000637941 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
TCF4-289ENST00000637941 ROCK1Q13464 1354 aa17.86■□□□□ 0.45
TCF4-289ENST00000637941 DISP1Q96F81 1524 aa17.86■□□□□ 0.45
TCF4-289ENST00000637941 RRP7BPQ9NSQ0 103 aa17.85■□□□□ 0.45
TCF4-289ENST00000637941 NEFLP07196 543 aa17.84■□□□□ 0.45
TCF4-289ENST00000637941 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
TCF4-289ENST00000637941 DNMT1P26358 1616 aaKnown RBP17.84■□□□□ 0.45
TCF4-289ENST00000637941 NUP160Q12769 1436 aa17.84■□□□□ 0.45
TCF4-289ENST00000637941 TRIM52Q96A61 297 aa17.83■□□□□ 0.45
TCF4-289ENST00000637941 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.44
TCF4-289ENST00000637941 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
TCF4-289ENST00000637941 KDM6BO15054 1643 aa17.8■□□□□ 0.44
TCF4-289ENST00000637941 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms