RNA–Protein interactions for RNA: ENST00000637909.1

CLCN2-221, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-221ENST00000637909 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
CLCN2-221ENST00000637909 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
CLCN2-221ENST00000637909 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
CLCN2-221ENST00000637909 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
CLCN2-221ENST00000637909 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
CLCN2-221ENST00000637909 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
CLCN2-221ENST00000637909 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
CLCN2-221ENST00000637909 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
CLCN2-221ENST00000637909 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■■■■□ 25.5
CLCN2-221ENST00000637909 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
CLCN2-221ENST00000637909 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
CLCN2-221ENST00000637909 ATP1B4Q9UN42 357 aaPredicted RBP15.84■□□□□ 0.13
CLCN2-221ENST00000637909 ITGAEP38570 1179 aa15.8■□□□□ 0.12
CLCN2-221ENST00000637909 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
CLCN2-221ENST00000637909 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
CLCN2-221ENST00000637909 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
CLCN2-221ENST00000637909 FHOD3Q2V2M9 1422 aa15.74■□□□□ 0.11
CLCN2-221ENST00000637909 CUL7Q14999 1698 aa15.73■□□□□ 0.11
CLCN2-221ENST00000637909 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
CLCN2-221ENST00000637909 CCNB3Q8WWL7 1395 aa15.67■□□□□ 0.1
CLCN2-221ENST00000637909 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
CLCN2-221ENST00000637909 ADAMTS12P58397 1594 aa15.66■□□□□ 0.1
CLCN2-221ENST00000637909 RRBP1Q9P2E9 1410 aaKnown RBP15.66■□□□□ 0.1
CLCN2-221ENST00000637909 TIAM1Q13009 1591 aa15.66■□□□□ 0.1
CLCN2-221ENST00000637909 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
CLCN2-221ENST00000637909 PCF11O94913 1555 aaKnown RBP15.65■□□□□ 0.1
CLCN2-221ENST00000637909 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
CLCN2-221ENST00000637909 FBLN2P98095 1184 aa15.64■□□□□ 0.09
CLCN2-221ENST00000637909 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
CLCN2-221ENST00000637909 LRRC9Q6ZRR7 1453 aa15.63■□□□□ 0.09
CLCN2-221ENST00000637909 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
CLCN2-221ENST00000637909 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
CLCN2-221ENST00000637909 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
CLCN2-221ENST00000637909 DHX57Q6P158 1386 aaKnown RBP15.6■□□□□ 0.09
CLCN2-221ENST00000637909 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
CLCN2-221ENST00000637909 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
CLCN2-221ENST00000637909 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
CLCN2-221ENST00000637909 GRIN2AQ12879 1464 aa15.57■□□□□ 0.08
CLCN2-221ENST00000637909 EFCAB5A4FU69 1503 aa15.56■□□□□ 0.08
CLCN2-221ENST00000637909 MAP3K1Q13233 1512 aa15.55■□□□□ 0.08
CLCN2-221ENST00000637909 CASKIN1Q8WXD9 1431 aa15.54■□□□□ 0.08
CLCN2-221ENST00000637909 ARID3CA6NKF2 412 aa15.54■□□□□ 0.08
CLCN2-221ENST00000637909 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
CLCN2-221ENST00000637909 CFAP43Q8NDM7 1665 aa15.52■□□□□ 0.07
CLCN2-221ENST00000637909 CHD1O14646 1710 aa15.51■□□□□ 0.07
CLCN2-221ENST00000637909 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
CLCN2-221ENST00000637909 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
CLCN2-221ENST00000637909 MTUS2Q5JR59 1369 aa15.48■□□□□ 0.07
CLCN2-221ENST00000637909 CEP170Q5SW79 1584 aa15.48■□□□□ 0.07
CLCN2-221ENST00000637909 SAMD9Q5K651 1589 aa15.46■□□□□ 0.07
CLCN2-221ENST00000637909 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
CLCN2-221ENST00000637909 NUP160Q12769 1436 aa15.44■□□□□ 0.06
CLCN2-221ENST00000637909 KIAA0586Q9BVV6 1533 aa15.44■□□□□ 0.06
CLCN2-221ENST00000637909 LRRIQ1Q96JM4 1722 aa15.43■□□□□ 0.06
CLCN2-221ENST00000637909 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
CLCN2-221ENST00000637909 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
CLCN2-221ENST00000637909 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
CLCN2-221ENST00000637909 MIER1Q8N108 512 aa15.39■□□□□ 0.05
CLCN2-221ENST00000637909 SIN3AQ96ST3 1273 aa15.39■□□□□ 0.05
CLCN2-221ENST00000637909 FGD6Q6ZV73 1430 aa15.39■□□□□ 0.05
CLCN2-221ENST00000637909 YTHDC1Q96MU7 727 aaKnown RBP15.37■□□□□ 0.05
CLCN2-221ENST00000637909 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
CLCN2-221ENST00000637909 JPH4Q96JJ6 628 aa15.37■□□□□ 0.05
CLCN2-221ENST00000637909 NCOA2Q15596 1464 aa15.36■□□□□ 0.05
CLCN2-221ENST00000637909 MAPKBP1O60336 1514 aa15.35■□□□□ 0.05
CLCN2-221ENST00000637909 MAGI3Q5TCQ9 1506 aa15.35■□□□□ 0.05
CLCN2-221ENST00000637909 UGGT2Q9NYU1 1516 aa15.35■□□□□ 0.05
CLCN2-221ENST00000637909 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
CLCN2-221ENST00000637909 CDK13Q14004 1512 aaKnown RBP15.34■□□□□ 0.05
CLCN2-221ENST00000637909 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
CLCN2-221ENST00000637909 CHIC2Q9UKJ5 165 aa15.32■□□□□ 0.04
CLCN2-221ENST00000637909 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
CLCN2-221ENST00000637909 DISP1Q96F81 1524 aa15.31■□□□□ 0.04
CLCN2-221ENST00000637909 MYOM3Q5VTT5 1437 aa15.3■□□□□ 0.04
CLCN2-221ENST00000637909 ACIN1Q9UKV3 1341 aaKnown RBP15.29■□□□□ 0.04
CLCN2-221ENST00000637909 EPRSP07814 1512 aaKnown RBP15.29■□□□□ 0.04
CLCN2-221ENST00000637909 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
CLCN2-221ENST00000637909 KIAA0556O60303 1618 aa15.29■□□□□ 0.04
CLCN2-221ENST00000637909 RRP7BPQ9NSQ0 103 aa15.28■□□□□ 0.04
CLCN2-221ENST00000637909 SUPT6HQ7KZ85 1726 aaKnown RBP15.28■□□□□ 0.04
CLCN2-221ENST00000637909 EHBP1L1Q8N3D4 1523 aa15.28■□□□□ 0.04
CLCN2-221ENST00000637909 CARMIL2Q6F5E8 1435 aa15.28■□□□□ 0.04
CLCN2-221ENST00000637909 PRG4Q92954 1404 aaPredicted RBP15.28■□□□□ 0.04
CLCN2-221ENST00000637909 HECW1Q76N89 1606 aa15.27■□□□□ 0.03
CLCN2-221ENST00000637909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.27■□□□□ 0.03
CLCN2-221ENST00000637909 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.03
CLCN2-221ENST00000637909 CCDC18Q5T9S5 1454 aa15.26■□□□□ 0.03
CLCN2-221ENST00000637909 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
CLCN2-221ENST00000637909 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
CLCN2-221ENST00000637909 PTPN23Q9H3S7 1636 aa15.23■□□□□ 0.03
CLCN2-221ENST00000637909 HIRIP3Q9BW71 556 aaPredicted RBP15.21■□□□□ 0.03
CLCN2-221ENST00000637909 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
CLCN2-221ENST00000637909 NAIPQ13075 1403 aa15.2■□□□□ 0.02
CLCN2-221ENST00000637909 HFM1A2PYH4 1435 aa15.2■□□□□ 0.02
CLCN2-221ENST00000637909 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
CLCN2-221ENST00000637909 ZNF644Q9H582 1327 aaPredicted RBP15.19■□□□□ 0.02
CLCN2-221ENST00000637909 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
CLCN2-221ENST00000637909 PLB1Q6P1J6 1458 aa15.18■□□□□ 0.02
CLCN2-221ENST00000637909 TRIM52Q96A61 297 aa15.17■□□□□ 0.02
CLCN2-221ENST00000637909 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms