RNA–Protein interactions for RNA: ENST00000637328.1

LINC01548-202, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 1 (best)

Gene LINC01548, Length 454 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-202ENST00000637328 KDM6BO15054 1643 aa19.13■□□□□ 0.65
LINC01548-202ENST00000637328 LOC105371045A0A1W2PR82 267 aa19.12■□□□□ 0.65
LINC01548-202ENST00000637328 CEP170Q5SW79 1584 aa19.11■□□□□ 0.65
LINC01548-202ENST00000637328 HECW2Q9P2P5 1572 aa19.1■□□□□ 0.65
LINC01548-202ENST00000637328 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
LINC01548-202ENST00000637328 IGF1RP08069 1367 aa19.06■□□□□ 0.64
LINC01548-202ENST00000637328 PBRM1Q86U86 1689 aa19.04■□□□□ 0.64
LINC01548-202ENST00000637328 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
LINC01548-202ENST00000637328 DIP2BQ9P265 1576 aa19.02■□□□□ 0.64
LINC01548-202ENST00000637328 ABCA5Q8WWZ7 1642 aa19.01■□□□□ 0.63
LINC01548-202ENST00000637328 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
LINC01548-202ENST00000637328 SHROOM2Q13796 1616 aa19■□□□□ 0.63
LINC01548-202ENST00000637328 NUP160Q12769 1436 aa19■□□□□ 0.63
LINC01548-202ENST00000637328 MAPKBP1O60336 1514 aa18.99■□□□□ 0.63
LINC01548-202ENST00000637328 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC01548-202ENST00000637328 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
LINC01548-202ENST00000637328 CARMIL1Q5VZK9 1371 aa18.96■□□□□ 0.63
LINC01548-202ENST00000637328 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
LINC01548-202ENST00000637328 KIF21BO75037 1637 aa18.94■□□□□ 0.62
LINC01548-202ENST00000637328 GOLGA3Q08378 1498 aa18.93■□□□□ 0.62
LINC01548-202ENST00000637328 LMTK3Q96Q04 1460 aa18.93■□□□□ 0.62
LINC01548-202ENST00000637328 RAPGEF2Q9Y4G8 1499 aa18.92■□□□□ 0.62
LINC01548-202ENST00000637328 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
LINC01548-202ENST00000637328 TSPOAP1O95153 1857 aa18.9■□□□□ 0.62
LINC01548-202ENST00000637328 PRG4Q92954 1404 aaPredicted RBP18.9■□□□□ 0.62
LINC01548-202ENST00000637328 CUL7Q14999 1698 aa18.87■□□□□ 0.61
LINC01548-202ENST00000637328 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.61
LINC01548-202ENST00000637328 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.61
LINC01548-202ENST00000637328 ADAMTS12P58397 1594 aa18.83■□□□□ 0.6
LINC01548-202ENST00000637328 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
LINC01548-202ENST00000637328 SOCS7O14512 581 aa18.81■□□□□ 0.6
LINC01548-202ENST00000637328 ADCY10Q96PN6 1610 aa18.81■□□□□ 0.6
LINC01548-202ENST00000637328 ILDR2Q71H61 639 aa18.74■□□□□ 0.59
LINC01548-202ENST00000637328 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
LINC01548-202ENST00000637328 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
LINC01548-202ENST00000637328 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
LINC01548-202ENST00000637328 PPRC1Q5VV67 1664 aaKnown RBP18.68■□□□□ 0.58
LINC01548-202ENST00000637328 CLIP1P30622 1438 aa18.64■□□□□ 0.57
LINC01548-202ENST00000637328 DISP3Q9P2K9 1392 aa18.61■□□□□ 0.57
LINC01548-202ENST00000637328 GLI2P10070 1586 aa18.6■□□□□ 0.57
LINC01548-202ENST00000637328 CTTNBP2Q8WZ74 1663 aa18.58■□□□□ 0.57
LINC01548-202ENST00000637328 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
LINC01548-202ENST00000637328 ASXL2Q76L83 1435 aa18.56■□□□□ 0.56
LINC01548-202ENST00000637328 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
LINC01548-202ENST00000637328 IQGAP2Q13576 1575 aa18.53■□□□□ 0.56
LINC01548-202ENST00000637328 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.55
LINC01548-202ENST00000637328 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
LINC01548-202ENST00000637328 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
LINC01548-202ENST00000637328 TEX14Q8IWB6 1497 aa18.49■□□□□ 0.55
LINC01548-202ENST00000637328 PTPRGP23470 1445 aa18.47■□□□□ 0.55
LINC01548-202ENST00000637328 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.55
LINC01548-202ENST00000637328 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
LINC01548-202ENST00000637328 UGGT2Q9NYU1 1516 aa18.45■□□□□ 0.54
LINC01548-202ENST00000637328 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
LINC01548-202ENST00000637328 FHOD3Q2V2M9 1422 aa18.42■□□□□ 0.54
LINC01548-202ENST00000637328 SAMD9Q5K651 1589 aa18.42■□□□□ 0.54
LINC01548-202ENST00000637328 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
LINC01548-202ENST00000637328 CERKQ8TCT0 537 aa18.41■□□□□ 0.54
LINC01548-202ENST00000637328 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
LINC01548-202ENST00000637328 PTPRMP28827 1452 aa18.39■□□□□ 0.53
LINC01548-202ENST00000637328 DISP1Q96F81 1524 aa18.38■□□□□ 0.53
LINC01548-202ENST00000637328 PCF11O94913 1555 aaKnown RBP18.37■□□□□ 0.53
LINC01548-202ENST00000637328 CARMIL2Q6F5E8 1435 aa18.36■□□□□ 0.53
LINC01548-202ENST00000637328 UHRF1BP1LA0JNW5 1464 aa18.34■□□□□ 0.53
LINC01548-202ENST00000637328 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
LINC01548-202ENST00000637328 SPATA31D1Q6ZQQ2 1576 aa18.32■□□□□ 0.52
LINC01548-202ENST00000637328 FMN1Q68DA7 1419 aa18.32■□□□□ 0.52
LINC01548-202ENST00000637328 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
LINC01548-202ENST00000637328 ADAMTSL3P82987 1691 aa18.28■□□□□ 0.52
LINC01548-202ENST00000637328 APLP2Q06481 763 aa18.28■□□□□ 0.52
LINC01548-202ENST00000637328 UACAQ9BZF9 1416 aa18.28■□□□□ 0.52
LINC01548-202ENST00000637328 KDM5BQ9UGL1 1544 aa18.28■□□□□ 0.52
LINC01548-202ENST00000637328 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
LINC01548-202ENST00000637328 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
LINC01548-202ENST00000637328 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
LINC01548-202ENST00000637328 HSPA2P54652 639 aa18.23■□□□□ 0.51
LINC01548-202ENST00000637328 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
LINC01548-202ENST00000637328 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
LINC01548-202ENST00000637328 CD109Q6YHK3 1445 aa18.21■□□□□ 0.51
LINC01548-202ENST00000637328 ZCCHC11Q5TAX3 1644 aaKnown RBP18.2■□□□□ 0.5
LINC01548-202ENST00000637328 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
LINC01548-202ENST00000637328 MADDQ8WXG6 1647 aa18.14■□□□□ 0.49
LINC01548-202ENST00000637328 ARID3CA6NKF2 412 aa18.13■□□□□ 0.49
LINC01548-202ENST00000637328 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
LINC01548-202ENST00000637328 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
LINC01548-202ENST00000637328 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
LINC01548-202ENST00000637328 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
LINC01548-202ENST00000637328 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
LINC01548-202ENST00000637328 CFAP43Q8NDM7 1665 aa18.12■□□□□ 0.49
LINC01548-202ENST00000637328 BCORL1Q5H9F3 1711 aa18.12■□□□□ 0.49
LINC01548-202ENST00000637328 ABCA8O94911 1581 aa18.11■□□□□ 0.49
LINC01548-202ENST00000637328 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
LINC01548-202ENST00000637328 NUP153P49790 1475 aaKnown RBP18.1■□□□□ 0.49
LINC01548-202ENST00000637328 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.49
LINC01548-202ENST00000637328 KCNH8Q96L42 1107 aa18.08■□□□□ 0.48
LINC01548-202ENST00000637328 ARID4BQ4LE39 1312 aaPredicted RBP18.07■□□□□ 0.48
LINC01548-202ENST00000637328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
LINC01548-202ENST00000637328 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
LINC01548-202ENST00000637328 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
LINC01548-202ENST00000637328 CDK13Q14004 1512 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms