RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
CACNA1A-236ENST00000637117 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-236ENST00000637117 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
CACNA1A-236ENST00000637117 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
CACNA1A-236ENST00000637117 CUX1P39880 1505 aa16.79■□□□□ 0.28
CACNA1A-236ENST00000637117 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
CACNA1A-236ENST00000637117 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
CACNA1A-236ENST00000637117 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
CACNA1A-236ENST00000637117 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
CACNA1A-236ENST00000637117 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
CACNA1A-236ENST00000637117 MYCNP04198 464 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-236ENST00000637117 GRIN2AQ12879 1464 aa16.58■□□□□ 0.24
CACNA1A-236ENST00000637117 ERCC6L2Q5T890 1561 aa16.58■□□□□ 0.24
CACNA1A-236ENST00000637117 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
CACNA1A-236ENST00000637117 NUP160Q12769 1436 aa16.54■□□□□ 0.24
CACNA1A-236ENST00000637117 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-236ENST00000637117 CEP170Q5SW79 1584 aa16.52■□□□□ 0.24
CACNA1A-236ENST00000637117 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
CACNA1A-236ENST00000637117 ADAMTS12P58397 1594 aa16.49■□□□□ 0.23
CACNA1A-236ENST00000637117 ATXN8OSP0DMR3 200 aa16.48■□□□□ 0.23
CACNA1A-236ENST00000637117 JPH4Q96JJ6 628 aa16.47■□□□□ 0.23
CACNA1A-236ENST00000637117 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
CACNA1A-236ENST00000637117 TOP2BQ02880 1626 aa16.44■□□□□ 0.22
CACNA1A-236ENST00000637117 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-236ENST00000637117 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
CACNA1A-236ENST00000637117 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
CACNA1A-236ENST00000637117 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
CACNA1A-236ENST00000637117 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
CACNA1A-236ENST00000637117 FAM69CQ0P6D2 419 aa16.39■□□□□ 0.21
CACNA1A-236ENST00000637117 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
CACNA1A-236ENST00000637117 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
CACNA1A-236ENST00000637117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNA1A-236ENST00000637117 MAPKBP1O60336 1514 aa16.26■□□□□ 0.19
CACNA1A-236ENST00000637117 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
CACNA1A-236ENST00000637117 KDM4FA0A1W2PPD8 638 aa16.23■□□□□ 0.19
CACNA1A-236ENST00000637117 KIAA0586Q9BVV6 1533 aa16.23■□□□□ 0.19
CACNA1A-236ENST00000637117 IGF1RP08069 1367 aa16.23■□□□□ 0.19
CACNA1A-236ENST00000637117 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
CACNA1A-236ENST00000637117 DIP2BQ9P265 1576 aa16.22■□□□□ 0.19
CACNA1A-236ENST00000637117 KDM6BO15054 1643 aa16.17■□□□□ 0.18
CACNA1A-236ENST00000637117 PTPRGP23470 1445 aa16.17■□□□□ 0.18
CACNA1A-236ENST00000637117 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-236ENST00000637117 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
CACNA1A-236ENST00000637117 TSPOAP1O95153 1857 aa16.16■□□□□ 0.18
CACNA1A-236ENST00000637117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-236ENST00000637117 HNRNPUL2Q1KMD3 747 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-236ENST00000637117 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-236ENST00000637117 CUL7Q14999 1698 aa16.11■□□□□ 0.17
CACNA1A-236ENST00000637117 CARMIL1Q5VZK9 1371 aa16.11■□□□□ 0.17
CACNA1A-236ENST00000637117 FKBP8Q14318 412 aa16.1■□□□□ 0.17
CACNA1A-236ENST00000637117 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-236ENST00000637117 ATF5Q9Y2D1 282 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-236ENST00000637117 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
CACNA1A-236ENST00000637117 CARMIL2Q6F5E8 1435 aa16.09■□□□□ 0.17
CACNA1A-236ENST00000637117 ABCC2Q92887 1545 aa16.06■□□□□ 0.16
CACNA1A-236ENST00000637117 ASXL2Q76L83 1435 aa16.06■□□□□ 0.16
CACNA1A-236ENST00000637117 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
CACNA1A-236ENST00000637117 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-236ENST00000637117 UACAQ9BZF9 1416 aa16.02■□□□□ 0.15
CACNA1A-236ENST00000637117 GLI2P10070 1586 aa16.01■□□□□ 0.15
CACNA1A-236ENST00000637117 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
CACNA1A-236ENST00000637117 IQGAP2Q13576 1575 aa15.98■□□□□ 0.15
CACNA1A-236ENST00000637117 PPRC1Q5VV67 1664 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-236ENST00000637117 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-236ENST00000637117 DISP1Q96F81 1524 aa15.96■□□□□ 0.15
CACNA1A-236ENST00000637117 ADGRL1O94910 1474 aa15.96■□□□□ 0.14
CACNA1A-236ENST00000637117 EPRSP07814 1512 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-236ENST00000637117 KDM5BQ9UGL1 1544 aa15.94■□□□□ 0.14
CACNA1A-236ENST00000637117 TEX14Q8IWB6 1497 aa15.91■□□□□ 0.14
CACNA1A-236ENST00000637117 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
CACNA1A-236ENST00000637117 MAP3K4Q9Y6R4 1608 aa15.9■□□□□ 0.14
CACNA1A-236ENST00000637117 UGGT2Q9NYU1 1516 aa15.89■□□□□ 0.13
CACNA1A-236ENST00000637117 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-236ENST00000637117 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-236ENST00000637117 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
CACNA1A-236ENST00000637117 KCNH8Q96L42 1107 aa15.85■□□□□ 0.13
CACNA1A-236ENST00000637117 KIAA0556O60303 1618 aa15.83■□□□□ 0.13
CACNA1A-236ENST00000637117 WDR7Q9Y4E6 1490 aa15.83■□□□□ 0.12
CACNA1A-236ENST00000637117 CD109Q6YHK3 1445 aa15.81■□□□□ 0.12
CACNA1A-236ENST00000637117 HECW2Q9P2P5 1572 aa15.81■□□□□ 0.12
CACNA1A-236ENST00000637117 APLP2Q06481 763 aa15.79■□□□□ 0.12
CACNA1A-236ENST00000637117 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
CACNA1A-236ENST00000637117 GOLGA3Q08378 1498 aa15.76■□□□□ 0.11
CACNA1A-236ENST00000637117 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-236ENST00000637117 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-236ENST00000637117 ABCA8O94911 1581 aa15.73■□□□□ 0.11
CACNA1A-236ENST00000637117 CFAP43Q8NDM7 1665 aa15.73■□□□□ 0.11
CACNA1A-236ENST00000637117 ARID3CA6NKF2 412 aa15.7■□□□□ 0.1
CACNA1A-236ENST00000637117 CTTNBP2Q8WZ74 1663 aa15.7■□□□□ 0.1
CACNA1A-236ENST00000637117 P3H3Q8IVL6 736 aa15.68■□□□□ 0.1
CACNA1A-236ENST00000637117 ARAP3Q8WWN8 1544 aa15.66■□□□□ 0.1
CACNA1A-236ENST00000637117 ATP10BO94823 1461 aa15.65■□□□□ 0.1
CACNA1A-236ENST00000637117 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
CACNA1A-236ENST00000637117 KIF21BO75037 1637 aa15.65■□□□□ 0.1
CACNA1A-236ENST00000637117 FBXO41Q8TF61 875 aa15.64■□□□□ 0.09
CACNA1A-236ENST00000637117 PHLDB1Q86UU1 1377 aa15.63■□□□□ 0.09
CACNA1A-236ENST00000637117 RAPGEF3O95398 923 aa15.63■□□□□ 0.09
CACNA1A-236ENST00000637117 PTPRMP28827 1452 aa15.59■□□□□ 0.09
CACNA1A-236ENST00000637117 ARID4BQ4LE39 1312 aaPredicted RBP15.58■□□□□ 0.08
CACNA1A-236ENST00000637117 ABCA9Q8IUA7 1624 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms