RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 ADRA2BP18089 450 aa13.25□□□□□ -0.29
CACNA1A-232ENST00000636966 SNAPC4Q5SXM2 1469 aa13.25□□□□□ -0.29
CACNA1A-232ENST00000636966 NUP160Q12769 1436 aa13.24□□□□□ -0.29
CACNA1A-232ENST00000636966 UGGT2Q9NYU1 1516 aa13.23□□□□□ -0.29
CACNA1A-232ENST00000636966 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
CACNA1A-232ENST00000636966 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
CACNA1A-232ENST00000636966 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
CACNA1A-232ENST00000636966 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
CACNA1A-232ENST00000636966 FHAD1B1AJZ9 1412 aa13.18□□□□□ -0.3
CACNA1A-232ENST00000636966 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-232ENST00000636966 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
CACNA1A-232ENST00000636966 SYNJ2O15056 1496 aa13.17□□□□□ -0.3
CACNA1A-232ENST00000636966 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
CACNA1A-232ENST00000636966 GRIN2AQ12879 1464 aa13.13□□□□□ -0.31
CACNA1A-232ENST00000636966 CFAP43Q8NDM7 1665 aa13.13□□□□□ -0.31
CACNA1A-232ENST00000636966 RANGAP1P46060 587 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-232ENST00000636966 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
CACNA1A-232ENST00000636966 FBLN2P98095 1184 aa13.11□□□□□ -0.31
CACNA1A-232ENST00000636966 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.31
CACNA1A-232ENST00000636966 IQGAP2Q13576 1575 aa13.07□□□□□ -0.32
CACNA1A-232ENST00000636966 KIAA0556O60303 1618 aa13.07□□□□□ -0.32
CACNA1A-232ENST00000636966 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
CACNA1A-232ENST00000636966 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
CACNA1A-232ENST00000636966 CLIP1P30622 1438 aa13.04□□□□□ -0.32
CACNA1A-232ENST00000636966 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
CACNA1A-232ENST00000636966 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
CACNA1A-232ENST00000636966 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
CACNA1A-232ENST00000636966 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
CACNA1A-232ENST00000636966 ABCA8O94911 1581 aa13□□□□□ -0.33
CACNA1A-232ENST00000636966 P3H3Q8IVL6 736 aa12.99□□□□□ -0.33
CACNA1A-232ENST00000636966 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
CACNA1A-232ENST00000636966 KDM5BQ9UGL1 1544 aa12.97□□□□□ -0.33
CACNA1A-232ENST00000636966 FHOD3Q2V2M9 1422 aa12.96□□□□□ -0.33
CACNA1A-232ENST00000636966 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
CACNA1A-232ENST00000636966 ERCC6L2Q5T890 1561 aa12.95□□□□□ -0.34
CACNA1A-232ENST00000636966 JPH4Q96JJ6 628 aa12.93□□□□□ -0.34
CACNA1A-232ENST00000636966 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.35
CACNA1A-232ENST00000636966 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-232ENST00000636966 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
CACNA1A-232ENST00000636966 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
CACNA1A-232ENST00000636966 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
CACNA1A-232ENST00000636966 RAPGEF6Q8TEU7 1601 aa12.85□□□□□ -0.35
CACNA1A-232ENST00000636966 PCF11O94913 1555 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-232ENST00000636966 TTBK1Q5TCY1 1321 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-232ENST00000636966 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
CACNA1A-232ENST00000636966 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
CACNA1A-232ENST00000636966 TIAM1Q13009 1591 aa12.8□□□□□ -0.36
CACNA1A-232ENST00000636966 KANK4Q5T7N3 995 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-232ENST00000636966 ARAP3Q8WWN8 1544 aa12.79□□□□□ -0.36
CACNA1A-232ENST00000636966 CASKIN1Q8WXD9 1431 aa12.78□□□□□ -0.36
CACNA1A-232ENST00000636966 FMN1Q68DA7 1419 aa12.77□□□□□ -0.36
CACNA1A-232ENST00000636966 CARMIL2Q6F5E8 1435 aa12.77□□□□□ -0.37
CACNA1A-232ENST00000636966 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
CACNA1A-232ENST00000636966 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
CACNA1A-232ENST00000636966 GLI2P10070 1586 aa12.75□□□□□ -0.37
CACNA1A-232ENST00000636966 CROCC2H7BZ55 1655 aa12.75□□□□□ -0.37
CACNA1A-232ENST00000636966 RIMBP3CA6NJZ7 1639 aa12.75□□□□□ -0.37
CACNA1A-232ENST00000636966 RIMBP3BA6NNM3 1639 aa12.75□□□□□ -0.37
CACNA1A-232ENST00000636966 RIMBP3Q9UFD9 1639 aa12.75□□□□□ -0.37
CACNA1A-232ENST00000636966 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
CACNA1A-232ENST00000636966 MAPKBP1O60336 1514 aa12.74□□□□□ -0.37
CACNA1A-232ENST00000636966 ZCCHC11Q5TAX3 1644 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-232ENST00000636966 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
CACNA1A-232ENST00000636966 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
CACNA1A-232ENST00000636966 CDK13Q14004 1512 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-232ENST00000636966 MAGI3Q5TCQ9 1506 aa12.73□□□□□ -0.37
CACNA1A-232ENST00000636966 HRCP23327 699 aa12.73□□□□□ -0.37
CACNA1A-232ENST00000636966 PTPRGP23470 1445 aa12.73□□□□□ -0.37
CACNA1A-232ENST00000636966 ATP1B4Q9UN42 357 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-232ENST00000636966 PIAS4Q8N2W9 510 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-232ENST00000636966 CCDC18Q5T9S5 1454 aa12.71□□□□□ -0.37
CACNA1A-232ENST00000636966 PPRC1Q5VV67 1664 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-232ENST00000636966 EPRSP07814 1512 aaKnown RBP12.71□□□□□ -0.38
CACNA1A-232ENST00000636966 MAP3K4Q9Y6R4 1608 aa12.71□□□□□ -0.38
CACNA1A-232ENST00000636966 ABCA9Q8IUA7 1624 aa12.7□□□□□ -0.38
CACNA1A-232ENST00000636966 CDC42BPAQ5VT25 1732 aa12.69□□□□□ -0.38
CACNA1A-232ENST00000636966 PREX2Q70Z35 1606 aa12.67□□□□□ -0.38
CACNA1A-232ENST00000636966 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
CACNA1A-232ENST00000636966 ATP10BO94823 1461 aa12.67□□□□□ -0.38
CACNA1A-232ENST00000636966 UACAQ9BZF9 1416 aa12.67□□□□□ -0.38
CACNA1A-232ENST00000636966 EHBP1L1Q8N3D4 1523 aa12.66□□□□□ -0.38
CACNA1A-232ENST00000636966 ITSN2Q9NZM3 1697 aa12.66□□□□□ -0.38
CACNA1A-232ENST00000636966 KIF13AQ9H1H9 1805 aa12.65□□□□□ -0.38
CACNA1A-232ENST00000636966 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-232ENST00000636966 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.39
CACNA1A-232ENST00000636966 ABCC10Q5T3U5 1492 aa12.64□□□□□ -0.39
CACNA1A-232ENST00000636966 MAST1Q9Y2H9 1570 aa12.64□□□□□ -0.39
CACNA1A-232ENST00000636966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNA1A-232ENST00000636966 SUPT6HQ7KZ85 1726 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-232ENST00000636966 PHLDB1Q86UU1 1377 aa12.61□□□□□ -0.39
CACNA1A-232ENST00000636966 APLP2Q06481 763 aa12.59□□□□□ -0.39
CACNA1A-232ENST00000636966 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
CACNA1A-232ENST00000636966 KIF14Q15058 1648 aa12.58□□□□□ -0.4
CACNA1A-232ENST00000636966 ARHGEF5Q12774 1597 aa12.57□□□□□ -0.4
CACNA1A-232ENST00000636966 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
CACNA1A-232ENST00000636966 GCC2Q8IWJ2 1684 aa12.56□□□□□ -0.4
CACNA1A-232ENST00000636966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-232ENST00000636966 HNRNPUL2Q1KMD3 747 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-232ENST00000636966 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
CACNA1A-232ENST00000636966 ADGBQ8N7X0 1667 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms