RNA–Protein interactions for RNA: ENST00000636566.1

EFHC1-222, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-222ENST00000636566 HMGXB3Q12766 1538 aa8.39□□□□□ -1.07
EFHC1-222ENST00000636566 PCGF6Q9BYE7 350 aa8.38□□□□□ -1.07
EFHC1-222ENST00000636566 WRNQ14191 1432 aaPredicted RBP eCLIP8.37□□□□□ -1.07
EFHC1-222ENST00000636566 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
EFHC1-222ENST00000636566 ATF5Q9Y2D1 282 aaPredicted RBP8.37□□□□□ -1.07
EFHC1-222ENST00000636566 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
EFHC1-222ENST00000636566 CSRNP3Q8WYN3 585 aa8.35□□□□□ -1.07
EFHC1-222ENST00000636566 GTF3C3Q9Y5Q9 886 aa8.35□□□□□ -1.07
EFHC1-222ENST00000636566 CC2D2AQ9P2K1 1620 aa8.33□□□□□ -1.08
EFHC1-222ENST00000636566 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
EFHC1-222ENST00000636566 PODXL2Q9NZ53 605 aa8.33□□□□□ -1.08
EFHC1-222ENST00000636566 EEA1Q15075 1411 aa8.32□□□□□ -1.08
EFHC1-222ENST00000636566 UBTFP17480 764 aaKnown RBP8.32□□□□□ -1.08
EFHC1-222ENST00000636566 OSCARQ8IYS5 282 aa8.31□□□□□ -1.08
EFHC1-222ENST00000636566 SOGA1O94964 1423 aa8.29□□□□□ -1.08
EFHC1-222ENST00000636566 ZEB1P37275 1124 aaPredicted RBP8.29□□□□□ -1.08
EFHC1-222ENST00000636566 FXR2P51116 673 aaKnown RBP eCLIP8.29□□□□□ -1.08
EFHC1-222ENST00000636566 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
EFHC1-222ENST00000636566 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
EFHC1-222ENST00000636566 PITPNM1O00562 1244 aa8.28□□□□□ -1.08
EFHC1-222ENST00000636566 SYNJ1O43426 1573 aa8.27□□□□□ -1.09
EFHC1-222ENST00000636566 ARXQ96QS3 562 aa8.27□□□□□ -1.09
EFHC1-222ENST00000636566 CADPSQ9ULU8 1353 aa8.26□□□□□ -1.09
EFHC1-222ENST00000636566 HAX1O00165 279 aa8.26□□□□□ -1.09
EFHC1-222ENST00000636566 CFTRP13569 1480 aa8.26□□□□□ -1.09
EFHC1-222ENST00000636566 ATXN8OSP0DMR3 200 aa8.25□□□□□ -1.09
EFHC1-222ENST00000636566 RUSC2Q8N2Y8 1516 aa8.24□□□□□ -1.09
EFHC1-222ENST00000636566 PKNOX2Q96KN3 472 aa8.24□□□□□ -1.09
EFHC1-222ENST00000636566 TOP2BQ02880 1626 aa8.23□□□□□ -1.09
EFHC1-222ENST00000636566 GOLGA3Q08378 1498 aa8.23□□□□□ -1.09
EFHC1-222ENST00000636566 RANGAP1P46060 587 aaPredicted RBP8.22□□□□□ -1.09
EFHC1-222ENST00000636566 TNIKQ9UKE5 1360 aa8.22□□□□□ -1.09
EFHC1-222ENST00000636566 PRDM2Q13029 1718 aa8.21□□□□□ -1.09
EFHC1-222ENST00000636566 BIVM-ERCC5R4GMW8 1640 aa8.21□□□□□ -1.1
EFHC1-222ENST00000636566 CEP164Q9UPV0 1460 aa8.2□□□□□ -1.1
EFHC1-222ENST00000636566 FBLN2P98095 1184 aa8.18□□□□□ -1.1
EFHC1-222ENST00000636566 CEP162Q5TB80 1403 aa8.18□□□□□ -1.1
EFHC1-222ENST00000636566 KIF27Q86VH2 1401 aa8.18□□□□□ -1.1
EFHC1-222ENST00000636566 CUX1P39880 1505 aa8.18□□□□□ -1.1
EFHC1-222ENST00000636566 EVX2Q03828 476 aa8.17□□□□□ -1.1
EFHC1-222ENST00000636566 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
EFHC1-222ENST00000636566 SPDYE2BA6NHP3 402 aa8.16□□□□□ -1.1
EFHC1-222ENST00000636566 SPDYE6P0CI01 402 aa8.16□□□□□ -1.1
EFHC1-222ENST00000636566 SPDYE2Q495Y8 402 aa8.16□□□□□ -1.1
EFHC1-222ENST00000636566 ERICH6BQ5W0A0 696 aa8.16□□□□□ -1.1
EFHC1-222ENST00000636566 KIF21BO75037 1637 aa8.15□□□□□ -1.1
EFHC1-222ENST00000636566 KLHL34Q8N239 644 aa8.14□□□□□ -1.11
EFHC1-222ENST00000636566 NESP48681 1621 aa8.14□□□□□ -1.11
EFHC1-222ENST00000636566 CUX2O14529 1486 aa8.13□□□□□ -1.11
EFHC1-222ENST00000636566 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
EFHC1-222ENST00000636566 LAMC3Q9Y6N6 1575 aa8.12□□□□□ -1.11
EFHC1-222ENST00000636566 FGD5Q6ZNL6 1462 aa8.12□□□□□ -1.11
EFHC1-222ENST00000636566 RAPGEF2Q9Y4G8 1499 aa8.12□□□□□ -1.11
EFHC1-222ENST00000636566 CLIP1P30622 1438 aa8.12□□□□□ -1.11
EFHC1-222ENST00000636566 ZBTB22O15209 634 aa8.1□□□□□ -1.11
EFHC1-222ENST00000636566 NEFLP07196 543 aa8.1□□□□□ -1.11
EFHC1-222ENST00000636566 DNMBPQ6XZF7 1577 aa8.1□□□□□ -1.11
EFHC1-222ENST00000636566 SALL2Q9Y467 1007 aaPredicted RBP8.09□□□□□ -1.11
EFHC1-222ENST00000636566 ERICH3Q5RHP9 1530 aa8.08□□□□□ -1.12
EFHC1-222ENST00000636566 TOPBP1Q92547 1522 aa8.08□□□□□ -1.12
EFHC1-222ENST00000636566 PDIA4P13667 645 aaKnown RBP8.07□□□□□ -1.12
EFHC1-222ENST00000636566 SPDYE1Q8NFV5 336 aaPredicted RBP8.07□□□□□ -1.12
EFHC1-222ENST00000636566 MYT1LQ9UL68 1186 aa8.07□□□□□ -1.12
EFHC1-222ENST00000636566 PRXQ9BXM0 1461 aa8.06□□□□□ -1.12
EFHC1-222ENST00000636566 CARMIL1Q5VZK9 1371 aa8.06□□□□□ -1.12
EFHC1-222ENST00000636566 PRKAR2AP13861 404 aaKnown RBP8.05□□□□□ -1.12
EFHC1-222ENST00000636566 IGF1RP08069 1367 aa8.05□□□□□ -1.12
EFHC1-222ENST00000636566 RAD54L2Q9Y4B4 1467 aa8.05□□□□□ -1.12
EFHC1-222ENST00000636566 PDE4CQ08493 712 aa8.04□□□□□ -1.12
EFHC1-222ENST00000636566 TSHZ2Q9NRE2 1034 aa8.04□□□□□ -1.12
EFHC1-222ENST00000636566 POLA1P09884 1462 aaPredicted RBP8.03□□□□□ -1.12
EFHC1-222ENST00000636566 C19orf67A6NJJ6 358 aa8.03□□□□□ -1.12
EFHC1-222ENST00000636566 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
EFHC1-222ENST00000636566 VPS8Q8N3P4 1428 aa8.03□□□□□ -1.12
EFHC1-222ENST00000636566 ZNF692Q9BU19 519 aaPredicted RBP8.02□□□□□ -1.13
EFHC1-222ENST00000636566 URB2Q14146 1524 aaKnown RBP8.02□□□□□ -1.13
EFHC1-222ENST00000636566 KIF21AQ7Z4S6 1674 aa8.02□□□□□ -1.13
EFHC1-222ENST00000636566 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
EFHC1-222ENST00000636566 ABCA10Q8WWZ4 1543 aa8.01□□□□□ -1.13
EFHC1-222ENST00000636566 ATP1B4Q9UN42 357 aaPredicted RBP8□□□□□ -1.13
EFHC1-222ENST00000636566 SSUH2Q9Y2M2 353 aa8□□□□□ -1.13
EFHC1-222ENST00000636566 ERCC6Q03468 1493 aa8□□□□□ -1.13
EFHC1-222ENST00000636566 TDRD9Q8NDG6 1382 aaKnown RBP7.99□□□□□ -1.13
EFHC1-222ENST00000636566 CCDC136Q96JN2 1154 aa7.99□□□□□ -1.13
EFHC1-222ENST00000636566 RTN4Q9NQC3 1192 aaKnown RBP7.99□□□□□ -1.13
EFHC1-222ENST00000636566 MRC2Q9UBG0 1479 aa7.99□□□□□ -1.13
EFHC1-222ENST00000636566 CLSPNQ9HAW4 1339 aa7.99□□□□□ -1.13
EFHC1-222ENST00000636566 MKRN4PQ13434 485 aaPredicted RBP7.98□□□□□ -1.13
EFHC1-222ENST00000636566 P3H3Q8IVL6 736 aa7.98□□□□□ -1.13
EFHC1-222ENST00000636566 CCER1Q8TC90 406 aaPredicted RBP7.98□□□□□ -1.13
EFHC1-222ENST00000636566 GABBR2O75899 941 aa7.97□□□□□ -1.13
EFHC1-222ENST00000636566 CUL7Q14999 1698 aa7.96□□□□□ -1.13
EFHC1-222ENST00000636566 GAPVD1Q14C86 1478 aa7.96□□□□□ -1.13
EFHC1-222ENST00000636566 HOMEZQ8IX15 550 aa7.96□□□□□ -1.14
EFHC1-222ENST00000636566 FGD1P98174 961 aa7.95□□□□□ -1.14
EFHC1-222ENST00000636566 ARAP1Q96P48 1450 aa7.94□□□□□ -1.14
EFHC1-222ENST00000636566 ARHGAP35Q9NRY4 1499 aa7.94□□□□□ -1.14
EFHC1-222ENST00000636566 LHX8Q68G74 356 aa7.93□□□□□ -1.14
EFHC1-222ENST00000636566 WDR97A6NE52 1622 aa7.92□□□□□ -1.14
EFHC1-222ENST00000636566 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms