RNA–Protein interactions for RNA: ENST00000636380.1

CACNB4-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,756 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-223	ENST00000636380	ABCA5	Q8WWZ7	1642 aa		10.57	□□□□□ -0.72
CACNB4-223	ENST00000636380	CLIP1	P30622	1438 aa		10.57	□□□□□ -0.72
CACNB4-223	ENST00000636380	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.57	□□□□□ -0.72
CACNB4-223	ENST00000636380	GRIN2B	Q13224	1484 aa		10.56	□□□□□ -0.72
CACNB4-223	ENST00000636380	FHAD1	B1AJZ9	1412 aa		10.53	□□□□□ -0.72
CACNB4-223	ENST00000636380	CUL7	Q14999	1698 aa		10.53	□□□□□ -0.72
CACNB4-223	ENST00000636380	SLC24A1	O60721	1099 aa		10.52	□□□□□ -0.73
CACNB4-223	ENST00000636380	OSCAR	Q8IYS5	282 aa		10.5	□□□□□ -0.73
CACNB4-223	ENST00000636380	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNB4-223	ENST00000636380	FBLN2	P98095	1184 aa		10.48	□□□□□ -0.73
CACNB4-223	ENST00000636380	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.48	□□□□□ -0.73
CACNB4-223	ENST00000636380	SNAPC4	Q5SXM2	1469 aa		10.47	□□□□□ -0.73
CACNB4-223	ENST00000636380	EIF4G3	O43432	1585 aa	Known RBP	10.47	□□□□□ -0.73
CACNB4-223	ENST00000636380	PBRM1	Q86U86	1689 aa		10.47	□□□□□ -0.73
CACNB4-223	ENST00000636380	P3H3	Q8IVL6	736 aa		10.46	□□□□□ -0.74
CACNB4-223	ENST00000636380	APLP2	Q06481	763 aa		10.45	□□□□□ -0.74
CACNB4-223	ENST00000636380	TRIM26	Q12899	539 aa	Predicted RBP	10.45	□□□□□ -0.74
CACNB4-223	ENST00000636380	VPS8	Q8N3P4	1428 aa		10.45	□□□□□ -0.74
CACNB4-223	ENST00000636380	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.45	□□□□□ -0.74
CACNB4-223	ENST00000636380	ADAMTS12	P58397	1594 aa		10.45	□□□□□ -0.74
CACNB4-223	ENST00000636380	ARHGAP35	Q9NRY4	1499 aa		10.44	□□□□□ -0.74
CACNB4-223	ENST00000636380	PPP4R3CP	Q6ZMV5	832 aa		10.44	□□□□□ -0.74
CACNB4-223	ENST00000636380	PCGF6	Q9BYE7	350 aa		10.44	□□□□□ -0.74
CACNB4-223	ENST00000636380	ARAP1	Q96P48	1450 aa		10.43	□□□□□ -0.74
CACNB4-223	ENST00000636380	DMRT2	Q9Y5R5	561 aa		10.42	□□□□□ -0.74
CACNB4-223	ENST00000636380	SYNJ2	O15056	1496 aa		10.42	□□□□□ -0.74
CACNB4-223	ENST00000636380	GRIN2A	Q12879	1464 aa		10.41	□□□□□ -0.74
CACNB4-223	ENST00000636380	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.39	□□□□□ -0.75
CACNB4-223	ENST00000636380	KIAA0586	Q9BVV6	1533 aa		10.38	□□□□□ -0.75
CACNB4-223	ENST00000636380	POTEH	Q6S545	545 aa		10.38	□□□□□ -0.75
CACNB4-223	ENST00000636380	CTTNBP2	Q8WZ74	1663 aa		10.38	□□□□□ -0.75
CACNB4-223	ENST00000636380	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNB4-223	ENST00000636380	FHOD3	Q2V2M9	1422 aa		10.37	□□□□□ -0.75
CACNB4-223	ENST00000636380	EFCAB5	A4FU69	1503 aa		10.37	□□□□□ -0.75
CACNB4-223	ENST00000636380	RIMBP3C	A6NJZ7	1639 aa		10.36	□□□□□ -0.75
CACNB4-223	ENST00000636380	RIMBP3B	A6NNM3	1639 aa		10.36	□□□□□ -0.75
CACNB4-223	ENST00000636380	RIMBP3	Q9UFD9	1639 aa		10.36	□□□□□ -0.75
CACNB4-223	ENST00000636380	JPH4	Q96JJ6	628 aa		10.35	□□□□□ -0.75
CACNB4-223	ENST00000636380	IQGAP2	Q13576	1575 aa		10.34	□□□□□ -0.75
CACNB4-223	ENST00000636380	NUP160	Q12769	1436 aa		10.33	□□□□□ -0.76
CACNB4-223	ENST00000636380	FMN1	Q68DA7	1419 aa		10.32	□□□□□ -0.76
CACNB4-223	ENST00000636380	UGGT2	Q9NYU1	1516 aa		10.32	□□□□□ -0.76
CACNB4-223	ENST00000636380	CEP170	Q5SW79	1584 aa		10.32	□□□□□ -0.76
CACNB4-223	ENST00000636380	KANK4	Q5T7N3	995 aa	Predicted RBP	10.31	□□□□□ -0.76
CACNB4-223	ENST00000636380	SAMD9	Q5K651	1589 aa		10.3	□□□□□ -0.76
CACNB4-223	ENST00000636380	CASKIN1	Q8WXD9	1431 aa		10.3	□□□□□ -0.76
CACNB4-223	ENST00000636380	ARHGEF11	O15085	1522 aa		10.28	□□□□□ -0.76
CACNB4-223	ENST00000636380	CARMIL2	Q6F5E8	1435 aa		10.28	□□□□□ -0.76
CACNB4-223	ENST00000636380	DISP1	Q96F81	1524 aa		10.27	□□□□□ -0.77
CACNB4-223	ENST00000636380	FYCO1	Q9BQS8	1478 aa		10.26	□□□□□ -0.77
CACNB4-223	ENST00000636380	MAP3K1	Q13233	1512 aa		10.26	□□□□□ -0.77
CACNB4-223	ENST00000636380	TRH	P20396	242 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNB4-223	ENST00000636380	CYB5RL	Q6IPT4	315 aa		10.24	□□□□□ -0.77
CACNB4-223	ENST00000636380	PCF11	O94913	1555 aa	Known RBP	10.24	□□□□□ -0.77
CACNB4-223	ENST00000636380	PRG4	Q92954	1404 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNB4-223	ENST00000636380	CHD1	O14646	1710 aa		10.24	□□□□□ -0.77
CACNB4-223	ENST00000636380	KIAA0556	O60303	1618 aa		10.23	□□□□□ -0.77
CACNB4-223	ENST00000636380	TIAM1	Q13009	1591 aa		10.22	□□□□□ -0.77
CACNB4-223	ENST00000636380	RNF39	Q9H2S5	420 aa		10.22	□□□□□ -0.77
CACNB4-223	ENST00000636380	LRRC9	Q6ZRR7	1453 aa		10.21	□□□□□ -0.78
CACNB4-223	ENST00000636380	ARID3C	A6NKF2	412 aa		10.21	□□□□□ -0.78
CACNB4-223	ENST00000636380	KCNA4	P22459	653 aa		10.21	□□□□□ -0.78
CACNB4-223	ENST00000636380	CNKSR2	Q8WXI2	1034 aa		10.2	□□□□□ -0.78
CACNB4-223	ENST00000636380	PTPRG	P23470	1445 aa		10.2	□□□□□ -0.78
CACNB4-223	ENST00000636380	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.19	□□□□□ -0.78
CACNB4-223	ENST00000636380	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.19	□□□□□ -0.78
CACNB4-223	ENST00000636380	MTUS2	Q5JR59	1369 aa		10.19	□□□□□ -0.78
CACNB4-223	ENST00000636380	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.17	□□□□□ -0.78
CACNB4-223	ENST00000636380	CCDC18	Q5T9S5	1454 aa		10.17	□□□□□ -0.78
CACNB4-223	ENST00000636380	EPRS	P07814	1512 aa	Known RBP	10.16	□□□□□ -0.78
CACNB4-223	ENST00000636380	PLB1	Q6P1J6	1458 aa		10.16	□□□□□ -0.78
CACNB4-223	ENST00000636380	HECW1	Q76N89	1606 aa		10.16	□□□□□ -0.78
CACNB4-223	ENST00000636380	CLASP1	Q7Z460	1538 aa		10.16	□□□□□ -0.78
CACNB4-223	ENST00000636380	DCAF8L1	A6NGE4	600 aa		10.15	□□□□□ -0.78
CACNB4-223	ENST00000636380	SHROOM2	Q13796	1616 aa		10.14	□□□□□ -0.79
CACNB4-223	ENST00000636380	CFAP43	Q8NDM7	1665 aa		10.14	□□□□□ -0.79
CACNB4-223	ENST00000636380	NUP153	P49790	1475 aa	Known RBP	10.14	□□□□□ -0.79
CACNB4-223	ENST00000636380	PHLDB1	Q86UU1	1377 aa		10.14	□□□□□ -0.79
CACNB4-223	ENST00000636380	RAPGEF6	Q8TEU7	1601 aa		10.13	□□□□□ -0.79
CACNB4-223	ENST00000636380	CDK13	Q14004	1512 aa	Known RBP	10.13	□□□□□ -0.79
CACNB4-223	ENST00000636380	CCNB3	Q8WWL7	1395 aa		10.13	□□□□□ -0.79
CACNB4-223	ENST00000636380	RRBP1	Q9P2E9	1410 aa	Known RBP	10.13	□□□□□ -0.79
CACNB4-223	ENST00000636380	PLEKHD1	A6NEE1	506 aa		10.12	□□□□□ -0.79
CACNB4-223	ENST00000636380	FAM50A	Q14320	339 aa	Known RBP	10.12	□□□□□ -0.79
CACNB4-223	ENST00000636380	UACA	Q9BZF9	1416 aa		10.11	□□□□□ -0.79
CACNB4-223	ENST00000636380	ABCA8	O94911	1581 aa		10.11	□□□□□ -0.79
CACNB4-223	ENST00000636380	ERCC6L2	Q5T890	1561 aa		10.11	□□□□□ -0.79
CACNB4-223	ENST00000636380	ITGAE	P38570	1179 aa		10.1	□□□□□ -0.79
CACNB4-223	ENST00000636380	ATP10B	O94823	1461 aa		10.1	□□□□□ -0.79
CACNB4-223	ENST00000636380	NCOA2	Q15596	1464 aa		10.1	□□□□□ -0.79
CACNB4-223	ENST00000636380	EHBP1L1	Q8N3D4	1523 aa		10.1	□□□□□ -0.79
CACNB4-223	ENST00000636380	LRRIQ1	Q96JM4	1722 aa		10.09	□□□□□ -0.79
CACNB4-223	ENST00000636380	HRC	P23327	699 aa		10.09	□□□□□ -0.79
CACNB4-223	ENST00000636380	NCBP3	Q53F19	620 aa	Known RBP	10.09	□□□□□ -0.79
CACNB4-223	ENST00000636380	MAGI3	Q5TCQ9	1506 aa		10.09	□□□□□ -0.79
CACNB4-223	ENST00000636380	HOXD11	P31277	338 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNB4-223	ENST00000636380	TRO	Q12816	1431 aa	Predicted RBP	10.06	□□□□□ -0.8
CACNB4-223	ENST00000636380	MYOM3	Q5VTT5	1437 aa		10.06	□□□□□ -0.8
CACNB4-223	ENST00000636380	FGD6	Q6ZV73	1430 aa		10.06	□□□□□ -0.8
CACNB4-223	ENST00000636380	CCER1	Q8TC90	406 aa	Predicted RBP	10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms