RNA–Protein interactions for RNA: ENST00000636193.1

SYNGAP1-213, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-213ENST00000636193 LTBP4Q8N2S1 1624 aa1.53□□□□□ -2.16
SYNGAP1-213ENST00000636193 PRDM6Q9NQX0 595 aa1.53□□□□□ -2.16
SYNGAP1-213ENST00000636193 FLNBO75369 2602 aaKnown RBP1.53□□□□□ -2.17
SYNGAP1-213ENST00000636193 NAV2Q8IVL1 2488 aa1.52□□□□□ -2.17
SYNGAP1-213ENST00000636193 AATKQ6ZMQ8 1374 aa1.52□□□□□ -2.17
SYNGAP1-213ENST00000636193 KRT37O76014 449 aa1.52□□□□□ -2.17
SYNGAP1-213ENST00000636193 PELP1Q8IZL8 1130 aaKnown RBP1.52□□□□□ -2.17
SYNGAP1-213ENST00000636193 TEP1Q99973 2627 aaKnown RBP1.52□□□□□ -2.17
SYNGAP1-213ENST00000636193 ABCA2Q9BZC7 2435 aa1.51□□□□□ -2.17
SYNGAP1-213ENST00000636193 HSPA6P17066 643 aa1.5□□□□□ -2.17
SYNGAP1-213ENST00000636193 MNX1P50219 401 aaPredicted RBP1.5□□□□□ -2.17
SYNGAP1-213ENST00000636193 RAPGEFL1Q9UHV5 662 aa1.5□□□□□ -2.17
SYNGAP1-213ENST00000636193 CHD6Q8TD26 2715 aa1.49□□□□□ -2.17
SYNGAP1-213ENST00000636193 CACNA1BQ00975 2339 aa1.49□□□□□ -2.17
SYNGAP1-213ENST00000636193 USP19O94966 1318 aa1.49□□□□□ -2.17
SYNGAP1-213ENST00000636193 P2RX7Q99572 595 aaKnown RBP1.49□□□□□ -2.17
SYNGAP1-213ENST00000636193 ABCA12Q86UK0 2595 aa1.49□□□□□ -2.17
SYNGAP1-213ENST00000636193 DOPEY1Q5JWR5 2465 aa1.48□□□□□ -2.17
SYNGAP1-213ENST00000636193 BDP1A6H8Y1 2624 aa1.48□□□□□ -2.17
SYNGAP1-213ENST00000636193 RGS20O76081 388 aa1.48□□□□□ -2.17
SYNGAP1-213ENST00000636193 SPATA18Q8TC71 538 aa1.48□□□□□ -2.17
SYNGAP1-213ENST00000636193 KHSRPQ92945 711 aaKnown RBP eCLIP1.48□□□□□ -2.17
SYNGAP1-213ENST00000636193 GCC1Q96CN9 775 aa1.48□□□□□ -2.17
SYNGAP1-213ENST00000636193 RGS17Q9UGC6 210 aaPredicted RBP1.48□□□□□ -2.17
SYNGAP1-213ENST00000636193 NOTCH2Q04721 2471 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 ANKRD17O75179 2603 aaKnown RBP1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 RGS19P49795 217 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 FOXK2Q01167 660 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 POTEAQ6S8J7 498 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 NANOS1Q8WY41 292 aaKnown RBP1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 RIMBP3CA6NJZ7 1639 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 RIMBP3BA6NNM3 1639 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 RIMBP3Q9UFD9 1639 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 EPG5Q9HCE0 2579 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 GPR179Q6PRD1 2367 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 SETBP1Q9Y6X0 1596 aa1.47□□□□□ -2.17
SYNGAP1-213ENST00000636193 ITPR3Q14573 2671 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 ABCC9O60706 1549 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 CNTNAP5Q8WYK1 1306 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 FBN3Q75N90 2809 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 UBAP1LF5GYI3 381 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 HSPA1LP34931 641 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 PRPF38BQ5VTL8 546 aaKnown RBP1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 SRPK3Q9UPE1 567 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 ZNF318Q5VUA4 2279 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 HECTD1Q9ULT8 2610 aa1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 SETD2Q9BYW2 2564 aaPredicted RBP1.46□□□□□ -2.18
SYNGAP1-213ENST00000636193 COL6A3P12111 3177 aa1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 PDE4DIPQ5VU43 2346 aa1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 SCAF1Q9H7N4 1312 aaKnown RBP1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 KDM6BO15054 1643 aa1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 CCDC85CA6NKD9 419 aa1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 ALYREFQ86V81 257 aaKnown RBP1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 ZSWIM6Q9HCJ5 1215 aa1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 FASNP49327 2511 aaKnown RBP1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 ARHGEF11O15085 1522 aa1.45□□□□□ -2.18
SYNGAP1-213ENST00000636193 ADGRL1O94910 1474 aa1.44□□□□□ -2.18
SYNGAP1-213ENST00000636193 SETD1AO15047 1707 aaKnown RBP1.44□□□□□ -2.18
SYNGAP1-213ENST00000636193 CFAP44Q96MT7 982 aa1.44□□□□□ -2.18
SYNGAP1-213ENST00000636193 HNRNPABQ99729 332 aaKnown RBP1.44□□□□□ -2.18
SYNGAP1-213ENST00000636193 COL25A1Q9BXS0 654 aaPredicted RBP1.44□□□□□ -2.18
SYNGAP1-213ENST00000636193 A0A0C4DFX4 3053 aa1.44□□□□□ -2.18
SYNGAP1-213ENST00000636193 MYO18BQ8IUG5 2567 aa1.43□□□□□ -2.18
SYNGAP1-213ENST00000636193 HABP4Q5JVS0 413 aaKnown RBP1.43□□□□□ -2.18
SYNGAP1-213ENST00000636193 TMEFF1Q8IYR6 380 aa1.43□□□□□ -2.18
SYNGAP1-213ENST00000636193 CECR2Q9BXF3 1484 aa1.43□□□□□ -2.18
SYNGAP1-213ENST00000636193 VASPP50552 380 aaPredicted RBP1.42□□□□□ -2.18
SYNGAP1-213ENST00000636193 LBX1P52954 281 aa1.42□□□□□ -2.18
SYNGAP1-213ENST00000636193 TRIM52Q96A61 297 aa1.42□□□□□ -2.18
SYNGAP1-213ENST00000636193 JMJD1CQ15652 2540 aa1.42□□□□□ -2.18
SYNGAP1-213ENST00000636193 PIEZO1Q92508 2521 aa1.42□□□□□ -2.18
SYNGAP1-213ENST00000636193 BICRAQ9NZM4 1560 aa1.42□□□□□ -2.18
SYNGAP1-213ENST00000636193 ZIC2O95409 532 aaPredicted RBP1.41□□□□□ -2.18
SYNGAP1-213ENST00000636193 APLP1P51693 650 aa1.41□□□□□ -2.18
SYNGAP1-213ENST00000636193 DNAJC5GQ8N7S2 189 aa1.41□□□□□ -2.18
SYNGAP1-213ENST00000636193 ABHD8Q96I13 439 aa1.41□□□□□ -2.18
SYNGAP1-213ENST00000636193 GCN1Q92616 2671 aaKnown RBP1.4□□□□□ -2.19
SYNGAP1-213ENST00000636193 SYNGAP1Q96PV0 1343 aa1.4□□□□□ -2.19
SYNGAP1-213ENST00000636193 FER1L4A9Z1Z3 1794 aa1.39□□□□□ -2.19
SYNGAP1-213ENST00000636193 KRTAP9-6A0A140TA67 174 aa1.39□□□□□ -2.19
SYNGAP1-213ENST00000636193 UBXN11Q5T124 520 aa1.39□□□□□ -2.19
SYNGAP1-213ENST00000636193 SGPP1Q9BX95 441 aa1.39□□□□□ -2.19
SYNGAP1-213ENST00000636193 LRRK2Q5S007 2527 aa1.39□□□□□ -2.19
SYNGAP1-213ENST00000636193 RGS12O14924 1447 aa1.39□□□□□ -2.19
SYNGAP1-213ENST00000636193 SPTBN4Q9H254 2564 aa1.39□□□□□ -2.19
SYNGAP1-213ENST00000636193 ERCC6Q03468 1493 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 KIAA1210Q9ULL0 1709 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 NOTCH1P46531 2555 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 TMEM265A0A087WTH1 108 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 CCDC194A0A1B0GVG4 234 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 PIP4K2BP78356 416 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 MAP3K12Q12852 859 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 COL6A5A8TX70 2615 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 PTPRTO14522 1441 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 UBR4Q5T4S7 5183 aa1.38□□□□□ -2.19
SYNGAP1-213ENST00000636193 CEP164Q9UPV0 1460 aa1.37□□□□□ -2.19
SYNGAP1-213ENST00000636193 A0A1B0GTL3 188 aa1.37□□□□□ -2.19
SYNGAP1-213ENST00000636193 CYSRT1A8MQ03 144 aa1.37□□□□□ -2.19
SYNGAP1-213ENST00000636193 DCAF8L2P0C7V8 631 aa1.37□□□□□ -2.19
SYNGAP1-213ENST00000636193 HSPA1AP0DMV8 641 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms