RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 ERICH6Q7L0X2 663 aa11.05□□□□□ -0.64
BRCA1-230ENST00000634433 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
BRCA1-230ENST00000634433 FGD5Q6ZNL6 1462 aa11.05□□□□□ -0.64
BRCA1-230ENST00000634433 TOPBP1Q92547 1522 aa11.02□□□□□ -0.65
BRCA1-230ENST00000634433 IGF1RP08069 1367 aa11.01□□□□□ -0.65
BRCA1-230ENST00000634433 TTBK1Q5TCY1 1321 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-230ENST00000634433 WDR97A6NE52 1622 aa10.99□□□□□ -0.65
BRCA1-230ENST00000634433 ABCA10Q8WWZ4 1543 aa10.98□□□□□ -0.65
BRCA1-230ENST00000634433 VPS8Q8N3P4 1428 aa10.98□□□□□ -0.65
BRCA1-230ENST00000634433 PPARGC1BQ86YN6 1023 aaKnown RBP10.98□□□□□ -0.65
BRCA1-230ENST00000634433 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
BRCA1-230ENST00000634433 POLA1P09884 1462 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-230ENST00000634433 CARMIL1Q5VZK9 1371 aa10.98□□□□□ -0.65
BRCA1-230ENST00000634433 CHD1O14646 1710 aa10.97□□□□□ -0.65
BRCA1-230ENST00000634433 ZEB1P37275 1124 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-230ENST00000634433 EIF4G3O43432 1585 aaKnown RBP10.96□□□□□ -0.66
BRCA1-230ENST00000634433 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
BRCA1-230ENST00000634433 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
BRCA1-230ENST00000634433 PODXL2Q9NZ53 605 aa10.93□□□□□ -0.66
BRCA1-230ENST00000634433 MYT1Q01538 1121 aa10.92□□□□□ -0.66
BRCA1-230ENST00000634433 RANGAP1P46060 587 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-230ENST00000634433 HOMEZQ8IX15 550 aa10.91□□□□□ -0.66
BRCA1-230ENST00000634433 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-230ENST00000634433 TARBP1Q13395 1621 aaKnown RBP10.9□□□□□ -0.66
BRCA1-230ENST00000634433 BCANQ96GW7 911 aa10.89□□□□□ -0.67
BRCA1-230ENST00000634433 CUL7Q14999 1698 aa10.89□□□□□ -0.67
BRCA1-230ENST00000634433 CLASP1Q7Z460 1538 aa10.86□□□□□ -0.67
BRCA1-230ENST00000634433 CYB5RLQ6IPT4 315 aa10.86□□□□□ -0.67
BRCA1-230ENST00000634433 GAPVD1Q14C86 1478 aa10.85□□□□□ -0.67
BRCA1-230ENST00000634433 ARHGAP35Q9NRY4 1499 aa10.85□□□□□ -0.67
BRCA1-230ENST00000634433 TRHP20396 242 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-230ENST00000634433 ZBTB22O15209 634 aa10.84□□□□□ -0.67
BRCA1-230ENST00000634433 ABCA5Q8WWZ7 1642 aa10.84□□□□□ -0.67
BRCA1-230ENST00000634433 TDRD9Q8NDG6 1382 aaKnown RBP10.83□□□□□ -0.67
BRCA1-230ENST00000634433 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
BRCA1-230ENST00000634433 MAGI1Q96QZ7 1491 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-230ENST00000634433 FHAD1B1AJZ9 1412 aa10.8□□□□□ -0.68
BRCA1-230ENST00000634433 HAP1P54257 671 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-230ENST00000634433 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
BRCA1-230ENST00000634433 EFCAB5A4FU69 1503 aa10.79□□□□□ -0.68
BRCA1-230ENST00000634433 MAP3K1Q13233 1512 aa10.77□□□□□ -0.68
BRCA1-230ENST00000634433 EIF5BO60841 1220 aaKnown RBP10.77□□□□□ -0.69
BRCA1-230ENST00000634433 CCER1Q8TC90 406 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-230ENST00000634433 ADRA2BP18089 450 aa10.77□□□□□ -0.69
BRCA1-230ENST00000634433 CTTNBP2Q8WZ74 1663 aa10.76□□□□□ -0.69
BRCA1-230ENST00000634433 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.69
BRCA1-230ENST00000634433 GRIN2BQ13224 1484 aa10.75□□□□□ -0.69
BRCA1-230ENST00000634433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-230ENST00000634433 PLEKHG5O94827 1062 aa10.73□□□□□ -0.69
BRCA1-230ENST00000634433 KANK4Q5T7N3 995 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-230ENST00000634433 SYNJ2O15056 1496 aa10.72□□□□□ -0.69
BRCA1-230ENST00000634433 FMN1Q68DA7 1419 aa10.72□□□□□ -0.69
BRCA1-230ENST00000634433 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
BRCA1-230ENST00000634433 SNAPC4Q5SXM2 1469 aa10.71□□□□□ -0.69
BRCA1-230ENST00000634433 P3H3Q8IVL6 736 aa10.71□□□□□ -0.7
BRCA1-230ENST00000634433 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
BRCA1-230ENST00000634433 CASKIN1Q8WXD9 1431 aa10.7□□□□□ -0.7
BRCA1-230ENST00000634433 FYCO1Q9BQS8 1478 aa10.7□□□□□ -0.7
BRCA1-230ENST00000634433 TIAM1Q13009 1591 aa10.7□□□□□ -0.7
BRCA1-230ENST00000634433 FHOD3Q2V2M9 1422 aa10.69□□□□□ -0.7
BRCA1-230ENST00000634433 ADAMTS12P58397 1594 aa10.69□□□□□ -0.7
BRCA1-230ENST00000634433 RRBP1Q9P2E9 1410 aaKnown RBP10.69□□□□□ -0.7
BRCA1-230ENST00000634433 SAMD9Q5K651 1589 aa10.67□□□□□ -0.7
BRCA1-230ENST00000634433 LRRC9Q6ZRR7 1453 aa10.67□□□□□ -0.7
BRCA1-230ENST00000634433 ATP1B4Q9UN42 357 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-230ENST00000634433 PCF11O94913 1555 aaKnown RBP10.65□□□□□ -0.7
BRCA1-230ENST00000634433 CCNB3Q8WWL7 1395 aa10.65□□□□□ -0.7
BRCA1-230ENST00000634433 FBLN2P98095 1184 aa10.65□□□□□ -0.7
BRCA1-230ENST00000634433 CHMP7Q8WUX9 453 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-230ENST00000634433 CFAP43Q8NDM7 1665 aa10.64□□□□□ -0.71
BRCA1-230ENST00000634433 KIF13AQ9H1H9 1805 aa10.64□□□□□ -0.71
BRCA1-230ENST00000634433 IQGAP2Q13576 1575 aa10.63□□□□□ -0.71
BRCA1-230ENST00000634433 SHROOM2Q13796 1616 aa10.63□□□□□ -0.71
BRCA1-230ENST00000634433 KIAA0586Q9BVV6 1533 aa10.61□□□□□ -0.71
BRCA1-230ENST00000634433 UGGT2Q9NYU1 1516 aa10.6□□□□□ -0.71
BRCA1-230ENST00000634433 NPM2Q86SE8 214 aaKnown RBP10.59□□□□□ -0.71
BRCA1-230ENST00000634433 GRIN2AQ12879 1464 aa10.59□□□□□ -0.71
BRCA1-230ENST00000634433 CLSPNQ9HAW4 1339 aa10.59□□□□□ -0.71
BRCA1-230ENST00000634433 MTUS2Q5JR59 1369 aa10.58□□□□□ -0.72
BRCA1-230ENST00000634433 CCDC18Q5T9S5 1454 aa10.58□□□□□ -0.72
BRCA1-230ENST00000634433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.57□□□□□ -0.72
BRCA1-230ENST00000634433 PHLDB1Q86UU1 1377 aa10.56□□□□□ -0.72
BRCA1-230ENST00000634433 NUP160Q12769 1436 aa10.56□□□□□ -0.72
BRCA1-230ENST00000634433 CEP170Q5SW79 1584 aa10.56□□□□□ -0.72
BRCA1-230ENST00000634433 TMEM132AQ24JP5 1023 aa10.55□□□□□ -0.72
BRCA1-230ENST00000634433 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
BRCA1-230ENST00000634433 HECW1Q76N89 1606 aa10.54□□□□□ -0.72
BRCA1-230ENST00000634433 C14orf37Q86TY3 774 aa10.54□□□□□ -0.72
BRCA1-230ENST00000634433 FAM50AQ14320 339 aaKnown RBP10.53□□□□□ -0.72
BRCA1-230ENST00000634433 MAPKBP1O60336 1514 aa10.52□□□□□ -0.72
BRCA1-230ENST00000634433 EHBP1L1Q8N3D4 1523 aa10.52□□□□□ -0.72
BRCA1-230ENST00000634433 ITGAEP38570 1179 aa10.52□□□□□ -0.73
BRCA1-230ENST00000634433 CARMIL2Q6F5E8 1435 aa10.51□□□□□ -0.73
BRCA1-230ENST00000634433 KIAA0556O60303 1618 aa10.51□□□□□ -0.73
BRCA1-230ENST00000634433 DISP1Q96F81 1524 aa10.5□□□□□ -0.73
BRCA1-230ENST00000634433 ABCC10Q5T3U5 1492 aa10.5□□□□□ -0.73
BRCA1-230ENST00000634433 FGD6Q6ZV73 1430 aa10.5□□□□□ -0.73
BRCA1-230ENST00000634433 SETD5Q9C0A6 1442 aa10.5□□□□□ -0.73
BRCA1-230ENST00000634433 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
BRCA1-230ENST00000634433 DHX57Q6P158 1386 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms