RNA–Protein interactions for RNA: ENST00000629289.2

CDK11B-208, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 5 BASIC

Gene CDK11B, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-208ENST00000629289 IL27Q8NEV9 243 aa24.69■■□□□ 1.54
CDK11B-208ENST00000629289 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
CDK11B-208ENST00000629289 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
CDK11B-208ENST00000629289 FANCIQ9NVI1 1328 aa24.65■■□□□ 1.54
CDK11B-208ENST00000629289 RTN4Q9NQC3 1192 aaKnown RBP24.64■■□□□ 1.54
CDK11B-208ENST00000629289 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
CDK11B-208ENST00000629289 NEFLP07196 543 aa24.63■■□□□ 1.53
CDK11B-208ENST00000629289 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
CDK11B-208ENST00000629289 SOGA1O94964 1423 aa24.56■■□□□ 1.52
CDK11B-208ENST00000629289 WDR62O43379 1518 aa24.55■■□□□ 1.52
CDK11B-208ENST00000629289 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
CDK11B-208ENST00000629289 BCANQ96GW7 911 aa24.53■■□□□ 1.52
CDK11B-208ENST00000629289 CEP162Q5TB80 1403 aa24.52■■□□□ 1.52
CDK11B-208ENST00000629289 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
CDK11B-208ENST00000629289 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
CDK11B-208ENST00000629289 ZMYND15Q9H091 742 aa24.47■■□□□ 1.51
CDK11B-208ENST00000629289 PDE4CQ08493 712 aa24.44■■□□□ 1.5
CDK11B-208ENST00000629289 RAD54L2Q9Y4B4 1467 aa24.41■■□□□ 1.5
CDK11B-208ENST00000629289 UBTFP17480 764 aaKnown RBP24.4■■□□□ 1.5
CDK11B-208ENST00000629289 GLIPR1L2Q4G1C9 344 aa24.36■■□□□ 1.49
CDK11B-208ENST00000629289 PDIA4P13667 645 aaKnown RBP24.35■■□□□ 1.49
CDK11B-208ENST00000629289 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
CDK11B-208ENST00000629289 HNRNPUL2Q1KMD3 747 aaKnown RBP24.34■■□□□ 1.49
CDK11B-208ENST00000629289 FGD1P98174 961 aa24.33■■□□□ 1.49
CDK11B-208ENST00000629289 ABCA10Q8WWZ4 1543 aa24.32■■□□□ 1.48
CDK11B-208ENST00000629289 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
CDK11B-208ENST00000629289 TNIKQ9UKE5 1360 aa24.31■■□□□ 1.48
CDK11B-208ENST00000629289 FKBP8Q14318 412 aa24.29■■□□□ 1.48
CDK11B-208ENST00000629289 A0A0U1RQG5 324 aaPredicted RBP24.29■■□□□ 1.48
CDK11B-208ENST00000629289 VSIG10Q8N0Z9 540 aa24.27■■□□□ 1.48
CDK11B-208ENST00000629289 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
CDK11B-208ENST00000629289 NBR1Q14596 966 aa24.25■■□□□ 1.47
CDK11B-208ENST00000629289 EEA1Q15075 1411 aa24.25■■□□□ 1.47
CDK11B-208ENST00000629289 KIF27Q86VH2 1401 aa24.23■■□□□ 1.47
CDK11B-208ENST00000629289 TIMELESSQ9UNS1 1208 aa24.21■■□□□ 1.47
CDK11B-208ENST00000629289 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.46
CDK11B-208ENST00000629289 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
CDK11B-208ENST00000629289 AAMPQ13685 434 aa24.19■■□□□ 1.46
CDK11B-208ENST00000629289 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
CDK11B-208ENST00000629289 ABCA5Q8WWZ7 1642 aa24.18■■□□□ 1.46
CDK11B-208ENST00000629289 ITGAEP38570 1179 aa24.17■■□□□ 1.46
CDK11B-208ENST00000629289 RBM10P98175 930 aaKnown RBP24.13■■□□□ 1.45
CDK11B-208ENST00000629289 KLHL34Q8N239 644 aa24.13■■□□□ 1.45
CDK11B-208ENST00000629289 BCL11BQ9C0K0 894 aaPredicted RBP24.13■■□□□ 1.45
CDK11B-208ENST00000629289 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.454e-7■■■■■ 29.4
CDK11B-208ENST00000629289 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
CDK11B-208ENST00000629289 GAPVD1Q14C86 1478 aa24.12■■□□□ 1.45
CDK11B-208ENST00000629289 IGF1RP08069 1367 aa24.09■■□□□ 1.45
CDK11B-208ENST00000629289 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
CDK11B-208ENST00000629289 RANGAP1P46060 587 aaPredicted RBP24.08■■□□□ 1.45
CDK11B-208ENST00000629289 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
CDK11B-208ENST00000629289 PBRM1Q86U86 1689 aa24.04■■□□□ 1.44
CDK11B-208ENST00000629289 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
CDK11B-208ENST00000629289 RTL5Q5HYW3 569 aaPredicted RBP24.02■■□□□ 1.44
CDK11B-208ENST00000629289 C11orf95C9JLR9 678 aaPredicted RBP24.01■■□□□ 1.43
CDK11B-208ENST00000629289 NOP58Q9Y2X3 529 aaKnown RBP24.01■■□□□ 1.43
CDK11B-208ENST00000629289 PRXQ9BXM0 1461 aa24■■□□□ 1.43
CDK11B-208ENST00000629289 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
CDK11B-208ENST00000629289 KIF21BO75037 1637 aa23.97■■□□□ 1.43
CDK11B-208ENST00000629289 NCBP3Q53F19 620 aaKnown RBP23.95■■□□□ 1.43
CDK11B-208ENST00000629289 CARMIL1Q5VZK9 1371 aa23.94■■□□□ 1.42
CDK11B-208ENST00000629289 CUL7Q14999 1698 aa23.94■■□□□ 1.42
CDK11B-208ENST00000629289 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
CDK11B-208ENST00000629289 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
CDK11B-208ENST00000629289 CLIP1P30622 1438 aa23.92■■□□□ 1.42
CDK11B-208ENST00000629289 PAK3O75914 559 aaPredicted RBP23.9■■□□□ 1.42
CDK11B-208ENST00000629289 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
CDK11B-208ENST00000629289 ADAMTS12P58397 1594 aa23.88■■□□□ 1.41
CDK11B-208ENST00000629289 MAGI1Q96QZ7 1491 aaPredicted RBP23.84■■□□□ 1.41
CDK11B-208ENST00000629289 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
CDK11B-208ENST00000629289 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
CDK11B-208ENST00000629289 TAF7LQ5H9L4 462 aa23.82■■□□□ 1.4
CDK11B-208ENST00000629289 WASHC2AQ641Q2 1341 aa23.78■■□□□ 1.4
CDK11B-208ENST00000629289 BRPF3Q9ULD4 1205 aa23.78■■□□□ 1.4
CDK11B-208ENST00000629289 WASHC2CQ9Y4E1 1318 aa23.77■■□□□ 1.4
CDK11B-208ENST00000629289 SYNJ2O15056 1496 aa23.76■■□□□ 1.39
CDK11B-208ENST00000629289 ARXQ96QS3 562 aa23.72■■□□□ 1.39
CDK11B-208ENST00000629289 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
CDK11B-208ENST00000629289 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
CDK11B-208ENST00000629289 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
CDK11B-208ENST00000629289 CHD1O14646 1710 aa23.65■■□□□ 1.38
CDK11B-208ENST00000629289 FBLN2P98095 1184 aa23.65■■□□□ 1.38
CDK11B-208ENST00000629289 KANK4Q5T7N3 995 aaPredicted RBP23.64■■□□□ 1.37
CDK11B-208ENST00000629289 KCNH8Q96L42 1107 aa23.63■■□□□ 1.37
CDK11B-208ENST00000629289 CTTNBP2Q8WZ74 1663 aa23.63■■□□□ 1.37
CDK11B-208ENST00000629289 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
CDK11B-208ENST00000629289 NUP160Q12769 1436 aa23.57■■□□□ 1.36
CDK11B-208ENST00000629289 HSP90AA2PQ14568 343 aaPredicted RBP23.57■■□□□ 1.36
CDK11B-208ENST00000629289 RRP9O43818 475 aaKnown RBP23.54■■□□□ 1.36
CDK11B-208ENST00000629289 ARAP1Q96P48 1450 aa23.53■■□□□ 1.36
CDK11B-208ENST00000629289 FAM43AQ8N2R8 423 aa23.53■■□□□ 1.36
CDK11B-208ENST00000629289 KIAA0586Q9BVV6 1533 aa23.51■■□□□ 1.35
CDK11B-208ENST00000629289 NEFMP07197 916 aa23.51■■□□□ 1.35
CDK11B-208ENST00000629289 IQGAP2Q13576 1575 aa23.5■■□□□ 1.35
CDK11B-208ENST00000629289 USP35Q9P2H5 1018 aa23.49■■□□□ 1.35
CDK11B-208ENST00000629289 PAXIP1Q6ZW49 1069 aaPredicted RBP23.47■■□□□ 1.35
CDK11B-208ENST00000629289 IPO9Q96P70 1041 aaKnown RBP23.47■■□□□ 1.35
CDK11B-208ENST00000629289 ZBTB47Q9UFB7 747 aaPredicted RBP23.44■■□□□ 1.34
CDK11B-208ENST00000629289 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
CDK11B-208ENST00000629289 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms