RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 EFCAB5A4FU69 1503 aa28■■■□□ 2.07
PTBP1-220ENST00000627714 CUL7Q14999 1698 aa27.99■■■□□ 2.07
PTBP1-220ENST00000627714 YTHDC1Q96MU7 727 aaKnown RBP27.98■■■□□ 2.07
PTBP1-220ENST00000627714 TOPBP1Q92547 1522 aa27.97■■■□□ 2.07
PTBP1-220ENST00000627714 PCF11O94913 1555 aaKnown RBP27.96■■■□□ 2.07
PTBP1-220ENST00000627714 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.07
PTBP1-220ENST00000627714 RAB3GAP2Q9H2M9 1393 aa27.94■■■□□ 2.06
PTBP1-220ENST00000627714 FYCO1Q9BQS8 1478 aa27.92■■■□□ 2.06
PTBP1-220ENST00000627714 AQRO60306 1485 aaKnown RBP eCLIP27.92■■■□□ 2.063e-8■■■■■ 33.8
PTBP1-220ENST00000627714 SETD5Q9C0A6 1442 aa27.9■■■□□ 2.06
PTBP1-220ENST00000627714 CTTNBP2Q8WZ74 1663 aa27.89■■■□□ 2.06
PTBP1-220ENST00000627714 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
PTBP1-220ENST00000627714 PHLDB1Q86UU1 1377 aa27.88■■■□□ 2.05
PTBP1-220ENST00000627714 MAPKBP1O60336 1514 aa27.86■■■□□ 2.05
PTBP1-220ENST00000627714 ITGAEP38570 1179 aa27.86■■■□□ 2.05
PTBP1-220ENST00000627714 CASKIN1Q8WXD9 1431 aa27.85■■■□□ 2.05
PTBP1-220ENST00000627714 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
PTBP1-220ENST00000627714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.82■■■□□ 2.043e-7■■■□□ 16.4
PTBP1-220ENST00000627714 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
PTBP1-220ENST00000627714 FHOD3Q2V2M9 1422 aa27.8■■■□□ 2.04
PTBP1-220ENST00000627714 FMN1Q68DA7 1419 aa27.77■■■□□ 2.04
PTBP1-220ENST00000627714 NESP48681 1621 aa27.77■■■□□ 2.04
PTBP1-220ENST00000627714 P3H3Q8IVL6 736 aa27.72■■■□□ 2.03
PTBP1-220ENST00000627714 FAM50AQ14320 339 aaKnown RBP27.71■■■□□ 2.03
PTBP1-220ENST00000627714 ABCA5Q8WWZ7 1642 aa27.71■■■□□ 2.03
PTBP1-220ENST00000627714 URB2Q14146 1524 aaKnown RBP27.7■■■□□ 2.03
PTBP1-220ENST00000627714 TIMELESSQ9UNS1 1208 aa27.69■■■□□ 2.02
PTBP1-220ENST00000627714 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
PTBP1-220ENST00000627714 SAMD9Q5K651 1589 aa27.66■■■□□ 2.02
PTBP1-220ENST00000627714 ATP1B4Q9UN42 357 aaPredicted RBP27.64■■■□□ 2.02
PTBP1-220ENST00000627714 THOC2Q8NI27 1593 aaKnown RBP27.62■■■□□ 2.01
PTBP1-220ENST00000627714 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
PTBP1-220ENST00000627714 FGD6Q6ZV73 1430 aa27.6■■■□□ 2.01
PTBP1-220ENST00000627714 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
PTBP1-220ENST00000627714 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
PTBP1-220ENST00000627714 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
PTBP1-220ENST00000627714 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
PTBP1-220ENST00000627714 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
PTBP1-220ENST00000627714 EHBP1L1Q8N3D4 1523 aa27.48■■□□□ 1.99
PTBP1-220ENST00000627714 LRRIQ1Q96JM4 1722 aa27.48■■□□□ 1.99
PTBP1-220ENST00000627714 SUPT6HQ7KZ85 1726 aaKnown RBP27.47■■□□□ 1.99
PTBP1-220ENST00000627714 HFM1A2PYH4 1435 aa27.47■■□□□ 1.99
PTBP1-220ENST00000627714 SIN3AQ96ST3 1273 aa27.46■■□□□ 1.99
PTBP1-220ENST00000627714 MYOM3Q5VTT5 1437 aa27.44■■□□□ 1.98
PTBP1-220ENST00000627714 CCDC18Q5T9S5 1454 aa27.44■■□□□ 1.98
PTBP1-220ENST00000627714 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
PTBP1-220ENST00000627714 NCOA2Q15596 1464 aa27.43■■□□□ 1.98
PTBP1-220ENST00000627714 PTPN23Q9H3S7 1636 aa27.41■■□□□ 1.98
PTBP1-220ENST00000627714 UACAQ9BZF9 1416 aa27.41■■□□□ 1.98
PTBP1-220ENST00000627714 PPP1R15AO75807 674 aaPredicted RBP27.39■■□□□ 1.97
PTBP1-220ENST00000627714 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
PTBP1-220ENST00000627714 UGGT2Q9NYU1 1516 aa27.36■■□□□ 1.97
PTBP1-220ENST00000627714 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
PTBP1-220ENST00000627714 PTPRKQ15262 1439 aa27.33■■□□□ 1.97
PTBP1-220ENST00000627714 HECW1Q76N89 1606 aa27.32■■□□□ 1.96
PTBP1-220ENST00000627714 NAIPQ13075 1403 aa27.32■■□□□ 1.96
PTBP1-220ENST00000627714 TONSLQ96HA7 1378 aa27.3■■□□□ 1.96
PTBP1-220ENST00000627714 IQGAP2Q13576 1575 aa27.28■■□□□ 1.96
PTBP1-220ENST00000627714 TCOF1Q13428 1488 aaKnown RBP27.27■■□□□ 1.96
PTBP1-220ENST00000627714 SUPT16HQ9Y5B9 1047 aaKnown RBP27.27■■□□□ 1.96
PTBP1-220ENST00000627714 DDX10Q13206 875 aaKnown RBP27.26■■□□□ 1.95
PTBP1-220ENST00000627714 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
PTBP1-220ENST00000627714 MAGI3Q5TCQ9 1506 aa27.23■■□□□ 1.95
PTBP1-220ENST00000627714 AKNAQ7Z591 1439 aa27.23■■□□□ 1.95
PTBP1-220ENST00000627714 GCC2Q8IWJ2 1684 aa27.22■■□□□ 1.95
PTBP1-220ENST00000627714 CCER2I3L3R5 266 aa27.18■■□□□ 1.94
PTBP1-220ENST00000627714 EPRSP07814 1512 aaKnown RBP27.18■■□□□ 1.94
PTBP1-220ENST00000627714 MYT1Q01538 1121 aa27.17■■□□□ 1.94
PTBP1-220ENST00000627714 MRC2Q9UBG0 1479 aa27.17■■□□□ 1.94
PTBP1-220ENST00000627714 MIA2Q96PC5 1412 aa27.17■■□□□ 1.94
PTBP1-220ENST00000627714 KCNH8Q96L42 1107 aa27.14■■□□□ 1.94
PTBP1-220ENST00000627714 WDR62O43379 1518 aa27.14■■□□□ 1.93
PTBP1-220ENST00000627714 ANP32CO43423 234 aa27.12■■□□□ 1.93
PTBP1-220ENST00000627714 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
PTBP1-220ENST00000627714 KDM5BQ9UGL1 1544 aa27.08■■□□□ 1.93
PTBP1-220ENST00000627714 IFT140Q96RY7 1462 aa27.05■■□□□ 1.92
PTBP1-220ENST00000627714 CDK13Q14004 1512 aaKnown RBP27.04■■□□□ 1.92
PTBP1-220ENST00000627714 HIRIP3Q9BW71 556 aaPredicted RBP27.01■■□□□ 1.91
PTBP1-220ENST00000627714 KIAA0586Q9BVV6 1533 aa26.99■■□□□ 1.91
PTBP1-220ENST00000627714 RRP7BPQ9NSQ0 103 aa26.98■■□□□ 1.91
PTBP1-220ENST00000627714 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
PTBP1-220ENST00000627714 DENND4BO75064 1496 aaPredicted RBP26.97■■□□□ 1.91
PTBP1-220ENST00000627714 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
PTBP1-220ENST00000627714 CHIC2Q9UKJ5 165 aa26.94■■□□□ 1.9
PTBP1-220ENST00000627714 KDM6BO15054 1643 aa26.94■■□□□ 1.9
PTBP1-220ENST00000627714 DISP1Q96F81 1524 aa26.92■■□□□ 1.9
PTBP1-220ENST00000627714 TRIM52Q96A61 297 aa26.91■■□□□ 1.9
PTBP1-220ENST00000627714 DNMT1P26358 1616 aaKnown RBP26.91■■□□□ 1.9
PTBP1-220ENST00000627714 DAPK1P53355 1430 aa26.89■■□□□ 1.9
PTBP1-220ENST00000627714 RAPGEF6Q8TEU7 1601 aa26.89■■□□□ 1.9
PTBP1-220ENST00000627714 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.89
PTBP1-220ENST00000627714 MPHOSPH9Q99550 1183 aa26.88■■□□□ 1.89
PTBP1-220ENST00000627714 NUP153P49790 1475 aaKnown RBP26.86■■□□□ 1.89
PTBP1-220ENST00000627714 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
PTBP1-220ENST00000627714 CDK11AQ9UQ88 783 aaPredicted RBP26.84■■□□□ 1.89
PTBP1-220ENST00000627714 ABCC5O15440 1437 aa26.82■■□□□ 1.88
PTBP1-220ENST00000627714 EIF4G3O43432 1585 aaKnown RBP26.81■■□□□ 1.88
PTBP1-220ENST00000627714 NEFLP07196 543 aa26.81■■□□□ 1.88
PTBP1-220ENST00000627714 EIF4G2P78344 907 aaKnown RBP eCLIP26.81■■□□□ 1.881e-7■□□□□ 8.1
PTBP1-220ENST00000627714 HSPA5P11021 654 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms