RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
TCF4-260ENST00000627685 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
TCF4-260ENST00000627685 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
TCF4-260ENST00000627685 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
TCF4-260ENST00000627685 TARBP1Q13395 1621 aaKnown RBP13.96□□□□□ -0.17
TCF4-260ENST00000627685 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
TCF4-260ENST00000627685 CUX1P39880 1505 aa13.95□□□□□ -0.18
TCF4-260ENST00000627685 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
TCF4-260ENST00000627685 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
TCF4-260ENST00000627685 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
TCF4-260ENST00000627685 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
TCF4-260ENST00000627685 SUPT5HO00267 1087 aaKnown RBP13.9□□□□□ -0.18
TCF4-260ENST00000627685 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
TCF4-260ENST00000627685 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
TCF4-260ENST00000627685 FGD5Q6ZNL6 1462 aa13.86□□□□□ -0.19
TCF4-260ENST00000627685 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
TCF4-260ENST00000627685 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
TCF4-260ENST00000627685 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
TCF4-260ENST00000627685 SSUH2Q9Y2M2 353 aa13.81□□□□□ -0.2
TCF4-260ENST00000627685 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
TCF4-260ENST00000627685 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
TCF4-260ENST00000627685 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.2
TCF4-260ENST00000627685 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
TCF4-260ENST00000627685 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
TCF4-260ENST00000627685 SOGA1O94964 1423 aa13.75□□□□□ -0.21
TCF4-260ENST00000627685 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
TCF4-260ENST00000627685 ABCA10Q8WWZ4 1543 aa13.73□□□□□ -0.21
TCF4-260ENST00000627685 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.22
TCF4-260ENST00000627685 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
TCF4-260ENST00000627685 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
TCF4-260ENST00000627685 CHD1O14646 1710 aa13.68□□□□□ -0.22
TCF4-260ENST00000627685 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
TCF4-260ENST00000627685 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
TCF4-260ENST00000627685 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
TCF4-260ENST00000627685 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
TCF4-260ENST00000627685 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
TCF4-260ENST00000627685 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
TCF4-260ENST00000627685 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
TCF4-260ENST00000627685 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
TCF4-260ENST00000627685 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
TCF4-260ENST00000627685 ADAMTS12P58397 1594 aa13.6□□□□□ -0.23
TCF4-260ENST00000627685 RIMBP3CA6NJZ7 1639 aa13.59□□□□□ -0.23
TCF4-260ENST00000627685 RIMBP3BA6NNM3 1639 aa13.59□□□□□ -0.23
TCF4-260ENST00000627685 RIMBP3Q9UFD9 1639 aa13.59□□□□□ -0.23
TCF4-260ENST00000627685 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
TCF4-260ENST00000627685 ARHGEF11O15085 1522 aa13.58□□□□□ -0.24
TCF4-260ENST00000627685 FKBP8Q14318 412 aa13.56□□□□□ -0.24
TCF4-260ENST00000627685 POTEHQ6S545 545 aa13.54□□□□□ -0.24
TCF4-260ENST00000627685 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
TCF4-260ENST00000627685 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
TCF4-260ENST00000627685 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
TCF4-260ENST00000627685 ARAP1Q96P48 1450 aa13.51□□□□□ -0.25
TCF4-260ENST00000627685 NUP160Q12769 1436 aa13.51□□□□□ -0.25
TCF4-260ENST00000627685 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
TCF4-260ENST00000627685 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
TCF4-260ENST00000627685 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
TCF4-260ENST00000627685 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
TCF4-260ENST00000627685 ERCC6L2Q5T890 1561 aa13.45□□□□□ -0.26
TCF4-260ENST00000627685 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
TCF4-260ENST00000627685 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
TCF4-260ENST00000627685 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
TCF4-260ENST00000627685 PROM2Q8N271 834 aa13.41□□□□□ -0.26
TCF4-260ENST00000627685 IGF1RP08069 1367 aa13.41□□□□□ -0.26
TCF4-260ENST00000627685 CHMP7Q8WUX9 453 aaPredicted RBP13.39□□□□□ -0.27
TCF4-260ENST00000627685 KIF27Q86VH2 1401 aa13.38□□□□□ -0.27
TCF4-260ENST00000627685 CUL7Q14999 1698 aa13.37□□□□□ -0.27
TCF4-260ENST00000627685 TRIM41Q8WV44 630 aa13.36□□□□□ -0.27
TCF4-260ENST00000627685 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
TCF4-260ENST00000627685 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
TCF4-260ENST00000627685 KIAA0586Q9BVV6 1533 aa13.27□□□□□ -0.29
TCF4-260ENST00000627685 CARMIL1Q5VZK9 1371 aa13.25□□□□□ -0.29
TCF4-260ENST00000627685 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
TCF4-260ENST00000627685 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
TCF4-260ENST00000627685 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
TCF4-260ENST00000627685 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
TCF4-260ENST00000627685 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
TCF4-260ENST00000627685 IQGAP2Q13576 1575 aa13.19□□□□□ -0.3
TCF4-260ENST00000627685 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
TCF4-260ENST00000627685 JPH4Q96JJ6 628 aa13.17□□□□□ -0.3
TCF4-260ENST00000627685 UGGT2Q9NYU1 1516 aa13.17□□□□□ -0.3
TCF4-260ENST00000627685 ADCY10Q96PN6 1610 aa13.16□□□□□ -0.3
TCF4-260ENST00000627685 HAX1O00165 279 aa13.15□□□□□ -0.3
TCF4-260ENST00000627685 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
TCF4-260ENST00000627685 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
TCF4-260ENST00000627685 KIAA0556O60303 1618 aa13.11□□□□□ -0.31
TCF4-260ENST00000627685 MIER1Q8N108 512 aa13.11□□□□□ -0.31
TCF4-260ENST00000627685 CTTNBP2Q8WZ74 1663 aa13.11□□□□□ -0.31
TCF4-260ENST00000627685 MAPKBP1O60336 1514 aa13.08□□□□□ -0.32
TCF4-260ENST00000627685 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
TCF4-260ENST00000627685 EEA1Q15075 1411 aa13.05□□□□□ -0.32
TCF4-260ENST00000627685 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
TCF4-260ENST00000627685 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
TCF4-260ENST00000627685 TNIKQ9UKE5 1360 aa13.04□□□□□ -0.32
TCF4-260ENST00000627685 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
TCF4-260ENST00000627685 KIF21BO75037 1637 aa13.03□□□□□ -0.32
TCF4-260ENST00000627685 KIF13AQ9H1H9 1805 aa13.03□□□□□ -0.32
TCF4-260ENST00000627685 DIP2BQ9P265 1576 aa13.03□□□□□ -0.32
TCF4-260ENST00000627685 ABCC2Q92887 1545 aa13.02□□□□□ -0.33
TCF4-260ENST00000627685 ABCA8O94911 1581 aa13□□□□□ -0.33
TCF4-260ENST00000627685 PTPRGP23470 1445 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms