RNA–Protein interactions for RNA: ENST00000626595.2

TCF4-255, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-255ENST00000626595 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
TCF4-255ENST00000626595 ARHGEF11O15085 1522 aa13.94□□□□□ -0.18
TCF4-255ENST00000626595 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
TCF4-255ENST00000626595 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
TCF4-255ENST00000626595 AKT1S1Q96B36 256 aa13.84□□□□□ -0.19
TCF4-255ENST00000626595 PROM2Q8N271 834 aa13.82□□□□□ -0.2
TCF4-255ENST00000626595 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
TCF4-255ENST00000626595 ARAP1Q96P48 1450 aa13.77□□□□□ -0.21
TCF4-255ENST00000626595 URB2Q14146 1524 aaKnown RBP13.75□□□□□ -0.21
TCF4-255ENST00000626595 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
TCF4-255ENST00000626595 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
TCF4-255ENST00000626595 CFTRP13569 1480 aa13.71□□□□□ -0.21
TCF4-255ENST00000626595 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
TCF4-255ENST00000626595 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
TCF4-255ENST00000626595 ILDR1Q86SU0 546 aaPredicted RBP13.65□□□□□ -0.22
TCF4-255ENST00000626595 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
TCF4-255ENST00000626595 PITPNM1O00562 1244 aa13.57□□□□□ -0.24
TCF4-255ENST00000626595 WIZO95785 1651 aa13.55□□□□□ -0.24
TCF4-255ENST00000626595 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
TCF4-255ENST00000626595 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.24
TCF4-255ENST00000626595 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
TCF4-255ENST00000626595 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
TCF4-255ENST00000626595 EIF4G3O43432 1585 aaKnown RBP13.52□□□□□ -0.25
TCF4-255ENST00000626595 CHD1O14646 1710 aa13.49□□□□□ -0.25
TCF4-255ENST00000626595 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
TCF4-255ENST00000626595 CHMP7Q8WUX9 453 aaPredicted RBP13.44□□□□□ -0.26
TCF4-255ENST00000626595 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
TCF4-255ENST00000626595 CHRDL2Q6WN34 429 aa13.43□□□□□ -0.26
TCF4-255ENST00000626595 CLASP1Q7Z460 1538 aa13.41□□□□□ -0.26
TCF4-255ENST00000626595 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
TCF4-255ENST00000626595 GAPVD1Q14C86 1478 aa13.38□□□□□ -0.27
TCF4-255ENST00000626595 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
TCF4-255ENST00000626595 TARBP1Q13395 1621 aaKnown RBP13.37□□□□□ -0.27
TCF4-255ENST00000626595 KDM4FA0A1W2PPD8 638 aa13.36□□□□□ -0.27
TCF4-255ENST00000626595 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
TCF4-255ENST00000626595 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
TCF4-255ENST00000626595 SYNJ1O43426 1573 aa13.35□□□□□ -0.27
TCF4-255ENST00000626595 DNMBPQ6XZF7 1577 aa13.34□□□□□ -0.27
TCF4-255ENST00000626595 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
TCF4-255ENST00000626595 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
TCF4-255ENST00000626595 SOGA1O94964 1423 aa13.3□□□□□ -0.28
TCF4-255ENST00000626595 RAD54L2Q9Y4B4 1467 aa13.3□□□□□ -0.28
TCF4-255ENST00000626595 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
TCF4-255ENST00000626595 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
TCF4-255ENST00000626595 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
TCF4-255ENST00000626595 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
TCF4-255ENST00000626595 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
TCF4-255ENST00000626595 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
TCF4-255ENST00000626595 SYNJ2O15056 1496 aa13.25□□□□□ -0.29
TCF4-255ENST00000626595 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
TCF4-255ENST00000626595 MIER1Q8N108 512 aa13.24□□□□□ -0.29
TCF4-255ENST00000626595 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
TCF4-255ENST00000626595 PRKAR2AP13861 404 aaKnown RBP13.21□□□□□ -0.29
TCF4-255ENST00000626595 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
TCF4-255ENST00000626595 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
TCF4-255ENST00000626595 FAM69CQ0P6D2 419 aa13.2□□□□□ -0.3
TCF4-255ENST00000626595 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
TCF4-255ENST00000626595 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
TCF4-255ENST00000626595 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
TCF4-255ENST00000626595 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
TCF4-255ENST00000626595 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
TCF4-255ENST00000626595 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
TCF4-255ENST00000626595 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
TCF4-255ENST00000626595 KIF13AQ9H1H9 1805 aa13.11□□□□□ -0.31
TCF4-255ENST00000626595 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
TCF4-255ENST00000626595 FBXO41Q8TF61 875 aa13.1□□□□□ -0.31
TCF4-255ENST00000626595 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
TCF4-255ENST00000626595 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
TCF4-255ENST00000626595 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
TCF4-255ENST00000626595 KDM6BO15054 1643 aa13.06□□□□□ -0.32
TCF4-255ENST00000626595 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
TCF4-255ENST00000626595 NUP160Q12769 1436 aa13.03□□□□□ -0.32
TCF4-255ENST00000626595 HECW2Q9P2P5 1572 aa13.01□□□□□ -0.33
TCF4-255ENST00000626595 CUX1P39880 1505 aa13□□□□□ -0.33
TCF4-255ENST00000626595 ADGRL1O94910 1474 aa13□□□□□ -0.33
TCF4-255ENST00000626595 POTEHQ6S545 545 aa13□□□□□ -0.33
TCF4-255ENST00000626595 SPOCK2Q92563 424 aa13□□□□□ -0.33
TCF4-255ENST00000626595 PRG4Q92954 1404 aaPredicted RBP12.99□□□□□ -0.33
TCF4-255ENST00000626595 JPH4Q96JJ6 628 aa12.99□□□□□ -0.33
TCF4-255ENST00000626595 DIP2BQ9P265 1576 aa12.98□□□□□ -0.33
TCF4-255ENST00000626595 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
TCF4-255ENST00000626595 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
TCF4-255ENST00000626595 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
TCF4-255ENST00000626595 NUBP1P53384 320 aa12.95□□□□□ -0.34
TCF4-255ENST00000626595 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
TCF4-255ENST00000626595 LMTK3Q96Q04 1460 aa12.92□□□□□ -0.34
TCF4-255ENST00000626595 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
TCF4-255ENST00000626595 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
TCF4-255ENST00000626595 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
TCF4-255ENST00000626595 ADAMTS12P58397 1594 aa12.87□□□□□ -0.35
TCF4-255ENST00000626595 SOCS7O14512 581 aa12.86□□□□□ -0.35
TCF4-255ENST00000626595 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
TCF4-255ENST00000626595 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
TCF4-255ENST00000626595 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
TCF4-255ENST00000626595 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
TCF4-255ENST00000626595 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
TCF4-255ENST00000626595 WRNQ14191 1432 aaPredicted RBP eCLIP12.81□□□□□ -0.36
TCF4-255ENST00000626595 COL17A1Q9UMD9 1497 aaPredicted RBP12.81□□□□□ -0.36
TCF4-255ENST00000626595 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
TCF4-255ENST00000626595 HAX1O00165 279 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms