RNA–Protein interactions for RNA: ENST00000624534.1

SMIM11B-206, Transcript of small integral membrane protein 11B, humanhuman

TSL 4

Gene SMIM11B, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-206ENST00000624534 SHROOM2Q13796 1616 aa25.62■■□□□ 1.69
SMIM11B-206ENST00000624534 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
SMIM11B-206ENST00000624534 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
SMIM11B-206ENST00000624534 CTTNBP2Q8WZ74 1663 aa25.59■■□□□ 1.69
SMIM11B-206ENST00000624534 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
SMIM11B-206ENST00000624534 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
SMIM11B-206ENST00000624534 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
SMIM11B-206ENST00000624534 IQGAP2Q13576 1575 aa25.56■■□□□ 1.68
SMIM11B-206ENST00000624534 JPH4Q96JJ6 628 aa25.51■■□□□ 1.67
SMIM11B-206ENST00000624534 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
SMIM11B-206ENST00000624534 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.66
SMIM11B-206ENST00000624534 UGGT2Q9NYU1 1516 aa25.41■■□□□ 1.66
SMIM11B-206ENST00000624534 ERCC6L2Q5T890 1561 aa25.39■■□□□ 1.65
SMIM11B-206ENST00000624534 CARMIL2Q6F5E8 1435 aa25.38■■□□□ 1.65
SMIM11B-206ENST00000624534 ARAP1Q96P48 1450 aa25.38■■□□□ 1.65
SMIM11B-206ENST00000624534 UBTFP17480 764 aaKnown RBP25.32■■□□□ 1.64
SMIM11B-206ENST00000624534 DISP1Q96F81 1524 aa25.3■■□□□ 1.64
SMIM11B-206ENST00000624534 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
SMIM11B-206ENST00000624534 CYB5RLQ6IPT4 315 aa25.28■■□□□ 1.64
SMIM11B-206ENST00000624534 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
SMIM11B-206ENST00000624534 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
SMIM11B-206ENST00000624534 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
SMIM11B-206ENST00000624534 EFCAB5A4FU69 1503 aa25.2■■□□□ 1.62
SMIM11B-206ENST00000624534 PTPRGP23470 1445 aa25.19■■□□□ 1.62
SMIM11B-206ENST00000624534 RANGAP1P46060 587 aaPredicted RBP25.09■■□□□ 1.61
SMIM11B-206ENST00000624534 TTBK1Q5TCY1 1321 aaPredicted RBP25.06■■□□□ 1.6
SMIM11B-206ENST00000624534 ADCY10Q96PN6 1610 aa25.04■■□□□ 1.6
SMIM11B-206ENST00000624534 UACAQ9BZF9 1416 aa25.04■■□□□ 1.6
SMIM11B-206ENST00000624534 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
SMIM11B-206ENST00000624534 UHRF1BP1LA0JNW5 1464 aa25.03■■□□□ 1.6
SMIM11B-206ENST00000624534 ARHGAP35Q9NRY4 1499 aa25.02■■□□□ 1.6
SMIM11B-206ENST00000624534 FHOD3Q2V2M9 1422 aa25.02■■□□□ 1.6
SMIM11B-206ENST00000624534 ABCC2Q92887 1545 aa25.02■■□□□ 1.6
SMIM11B-206ENST00000624534 ABCA8O94911 1581 aa24.99■■□□□ 1.59
SMIM11B-206ENST00000624534 CLIP1P30622 1438 aa24.98■■□□□ 1.59
SMIM11B-206ENST00000624534 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
SMIM11B-206ENST00000624534 NPM1P06748 294 aaKnown RBP eCLIP24.96■■□□□ 1.59
SMIM11B-206ENST00000624534 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
SMIM11B-206ENST00000624534 FMN1Q68DA7 1419 aa24.94■■□□□ 1.58
SMIM11B-206ENST00000624534 RAPGEF6Q8TEU7 1601 aa24.94■■□□□ 1.58
SMIM11B-206ENST00000624534 CEP162Q5TB80 1403 aa24.92■■□□□ 1.58
SMIM11B-206ENST00000624534 KDM5BQ9UGL1 1544 aa24.9■■□□□ 1.58
SMIM11B-206ENST00000624534 MAPKBP1O60336 1514 aa24.88■■□□□ 1.57
SMIM11B-206ENST00000624534 ZCCHC11Q5TAX3 1644 aaKnown RBP24.86■■□□□ 1.57
SMIM11B-206ENST00000624534 HECW1Q76N89 1606 aa24.81■■□□□ 1.56
SMIM11B-206ENST00000624534 NUP153P49790 1475 aaKnown RBP24.79■■□□□ 1.56
SMIM11B-206ENST00000624534 ATP10BO94823 1461 aa24.75■■□□□ 1.55
SMIM11B-206ENST00000624534 ASXL2Q76L83 1435 aa24.74■■□□□ 1.55
SMIM11B-206ENST00000624534 CASKIN1Q8WXD9 1431 aa24.74■■□□□ 1.55
SMIM11B-206ENST00000624534 PCF11O94913 1555 aaKnown RBP24.73■■□□□ 1.55
SMIM11B-206ENST00000624534 FYCO1Q9BQS8 1478 aa24.72■■□□□ 1.55
SMIM11B-206ENST00000624534 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.54
SMIM11B-206ENST00000624534 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.54
SMIM11B-206ENST00000624534 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
SMIM11B-206ENST00000624534 WDR7Q9Y4E6 1490 aa24.69■■□□□ 1.54
SMIM11B-206ENST00000624534 DIP2BQ9P265 1576 aa24.68■■□□□ 1.54
SMIM11B-206ENST00000624534 EPRSP07814 1512 aaKnown RBP24.68■■□□□ 1.54
SMIM11B-206ENST00000624534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.67■■□□□ 1.54
SMIM11B-206ENST00000624534 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
SMIM11B-206ENST00000624534 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
SMIM11B-206ENST00000624534 CCDC18Q5T9S5 1454 aa24.66■■□□□ 1.54
SMIM11B-206ENST00000624534 ARID3CA6NKF2 412 aa24.66■■□□□ 1.54
SMIM11B-206ENST00000624534 LRRIQ1Q96JM4 1722 aa24.65■■□□□ 1.54
SMIM11B-206ENST00000624534 VPS8Q8N3P4 1428 aa24.63■■□□□ 1.53
SMIM11B-206ENST00000624534 CDK13Q14004 1512 aaKnown RBP24.63■■□□□ 1.53
SMIM11B-206ENST00000624534 GLI2P10070 1586 aa24.62■■□□□ 1.53
SMIM11B-206ENST00000624534 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
SMIM11B-206ENST00000624534 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
SMIM11B-206ENST00000624534 FAM69CQ0P6D2 419 aa24.59■■□□□ 1.53
SMIM11B-206ENST00000624534 CFAP43Q8NDM7 1665 aa24.53■■□□□ 1.52
SMIM11B-206ENST00000624534 MAP3K4Q9Y6R4 1608 aa24.51■■□□□ 1.51
SMIM11B-206ENST00000624534 KCNH8Q96L42 1107 aa24.51■■□□□ 1.51
SMIM11B-206ENST00000624534 ABCA9Q8IUA7 1624 aa24.49■■□□□ 1.51
SMIM11B-206ENST00000624534 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
SMIM11B-206ENST00000624534 TROQ12816 1431 aaPredicted RBP24.48■■□□□ 1.51
SMIM11B-206ENST00000624534 KIF14Q15058 1648 aa24.45■■□□□ 1.5
SMIM11B-206ENST00000624534 TIAM1Q13009 1591 aa24.43■■□□□ 1.5
SMIM11B-206ENST00000624534 MAP3K1Q13233 1512 aa24.43■■□□□ 1.5
SMIM11B-206ENST00000624534 CD109Q6YHK3 1445 aa24.41■■□□□ 1.5
SMIM11B-206ENST00000624534 PPRC1Q5VV67 1664 aaKnown RBP24.4■■□□□ 1.5
SMIM11B-206ENST00000624534 TEX14Q8IWB6 1497 aa24.4■■□□□ 1.5
SMIM11B-206ENST00000624534 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
SMIM11B-206ENST00000624534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.4■■□□□ 1.5
SMIM11B-206ENST00000624534 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.49
SMIM11B-206ENST00000624534 MTUS2Q5JR59 1369 aa24.38■■□□□ 1.49
SMIM11B-206ENST00000624534 APLP2Q06481 763 aa24.37■■□□□ 1.49
SMIM11B-206ENST00000624534 TTC37Q6PGP7 1564 aa24.37■■□□□ 1.49
SMIM11B-206ENST00000624534 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
SMIM11B-206ENST00000624534 SUPT6HQ7KZ85 1726 aaKnown RBP24.3■■□□□ 1.48
SMIM11B-206ENST00000624534 LRRC9Q6ZRR7 1453 aa24.3■■□□□ 1.48
SMIM11B-206ENST00000624534 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
SMIM11B-206ENST00000624534 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
SMIM11B-206ENST00000624534 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
SMIM11B-206ENST00000624534 PLCH2O75038 1416 aa24.27■■□□□ 1.48
SMIM11B-206ENST00000624534 NEO1Q92859 1461 aa24.26■■□□□ 1.47
SMIM11B-206ENST00000624534 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
SMIM11B-206ENST00000624534 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
SMIM11B-206ENST00000624534 KDM6BO15054 1643 aa24.23■■□□□ 1.47
SMIM11B-206ENST00000624534 CDC42BPBQ9Y5S2 1711 aa24.22■■□□□ 1.47
SMIM11B-206ENST00000624534 FANCAO15360 1455 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms