RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 CTTNBP2Q8WZ74 1663 aa23.64■■□□□ 1.37
ATRX-211ENST00000623321 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
ATRX-211ENST00000623321 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
ATRX-211ENST00000623321 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
ATRX-211ENST00000623321 GRIN2AQ12879 1464 aa23.59■■□□□ 1.37
ATRX-211ENST00000623321 ARHGAP35Q9NRY4 1499 aa23.56■■□□□ 1.36
ATRX-211ENST00000623321 FBLN2P98095 1184 aa23.53■■□□□ 1.36
ATRX-211ENST00000623321 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
ATRX-211ENST00000623321 VPS8Q8N3P4 1428 aa23.51■■□□□ 1.35
ATRX-211ENST00000623321 EFCAB5A4FU69 1503 aa23.47■■□□□ 1.35
ATRX-211ENST00000623321 KIAA0586Q9BVV6 1533 aa23.47■■□□□ 1.35
ATRX-211ENST00000623321 IQGAP2Q13576 1575 aa23.47■■□□□ 1.35
ATRX-211ENST00000623321 NUP160Q12769 1436 aa23.44■■□□□ 1.34
ATRX-211ENST00000623321 CEP170Q5SW79 1584 aa23.43■■□□□ 1.34
ATRX-211ENST00000623321 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
ATRX-211ENST00000623321 SAMD9Q5K651 1589 aa23.4■■□□□ 1.34
ATRX-211ENST00000623321 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
ATRX-211ENST00000623321 CHD1O14646 1710 aa23.38■■□□□ 1.33
ATRX-211ENST00000623321 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
ATRX-211ENST00000623321 FHOD3Q2V2M9 1422 aa23.36■■□□□ 1.33
ATRX-211ENST00000623321 APLP2Q06481 763 aa23.31■■□□□ 1.32
ATRX-211ENST00000623321 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
ATRX-211ENST00000623321 FMN1Q68DA7 1419 aa23.28■■□□□ 1.32
ATRX-211ENST00000623321 DISP1Q96F81 1524 aa23.25■■□□□ 1.31
ATRX-211ENST00000623321 KIAA0556O60303 1618 aa23.23■■□□□ 1.31
ATRX-211ENST00000623321 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
ATRX-211ENST00000623321 CARMIL2Q6F5E8 1435 aa23.19■■□□□ 1.3
ATRX-211ENST00000623321 PCF11O94913 1555 aaKnown RBP23.19■■□□□ 1.3
ATRX-211ENST00000623321 FYCO1Q9BQS8 1478 aa23.19■■□□□ 1.3
ATRX-211ENST00000623321 MAP3K1Q13233 1512 aa23.15■■□□□ 1.3
ATRX-211ENST00000623321 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.29
ATRX-211ENST00000623321 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
ATRX-211ENST00000623321 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
ATRX-211ENST00000623321 PRG4Q92954 1404 aaPredicted RBP23.12■■□□□ 1.29
ATRX-211ENST00000623321 TTBK1Q5TCY1 1321 aaPredicted RBP23.12■■□□□ 1.29
ATRX-211ENST00000623321 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
ATRX-211ENST00000623321 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
ATRX-211ENST00000623321 CFAP43Q8NDM7 1665 aa23.04■■□□□ 1.28
ATRX-211ENST00000623321 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
ATRX-211ENST00000623321 HECW1Q76N89 1606 aa23.03■■□□□ 1.28
ATRX-211ENST00000623321 LRRC9Q6ZRR7 1453 aa23.01■■□□□ 1.27
ATRX-211ENST00000623321 RAPGEF6Q8TEU7 1601 aa22.99■■□□□ 1.27
ATRX-211ENST00000623321 LRRIQ1Q96JM4 1722 aa22.99■■□□□ 1.27
ATRX-211ENST00000623321 CCDC18Q5T9S5 1454 aa22.99■■□□□ 1.27
ATRX-211ENST00000623321 PTPRGP23470 1445 aa22.98■■□□□ 1.27
ATRX-211ENST00000623321 EPRSP07814 1512 aaKnown RBP22.96■■□□□ 1.27
ATRX-211ENST00000623321 PLB1Q6P1J6 1458 aa22.95■■□□□ 1.27
ATRX-211ENST00000623321 ERCC6L2Q5T890 1561 aa22.95■■□□□ 1.26
ATRX-211ENST00000623321 NUP153P49790 1475 aaKnown RBP22.93■■□□□ 1.26
ATRX-211ENST00000623321 ABCA8O94911 1581 aa22.92■■□□□ 1.26
ATRX-211ENST00000623321 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.25
ATRX-211ENST00000623321 CDK13Q14004 1512 aaKnown RBP22.88■■□□□ 1.25
ATRX-211ENST00000623321 ARID3CA6NKF2 412 aa22.86■■□□□ 1.25
ATRX-211ENST00000623321 UACAQ9BZF9 1416 aa22.84■■□□□ 1.25
ATRX-211ENST00000623321 EHBP1L1Q8N3D4 1523 aa22.84■■□□□ 1.25
ATRX-211ENST00000623321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.82■■□□□ 1.24
ATRX-211ENST00000623321 HNRNPUL2Q1KMD3 747 aaKnown RBP22.82■■□□□ 1.24
ATRX-211ENST00000623321 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
ATRX-211ENST00000623321 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
ATRX-211ENST00000623321 ATP10BO94823 1461 aa22.78■■□□□ 1.24
ATRX-211ENST00000623321 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
ATRX-211ENST00000623321 PHLDB1Q86UU1 1377 aa22.78■■□□□ 1.24
ATRX-211ENST00000623321 SUPT6HQ7KZ85 1726 aaKnown RBP22.77■■□□□ 1.24
ATRX-211ENST00000623321 ABCC2Q92887 1545 aa22.75■■□□□ 1.23
ATRX-211ENST00000623321 NCOA2Q15596 1464 aa22.75■■□□□ 1.23
ATRX-211ENST00000623321 UHRF1BP1LA0JNW5 1464 aa22.73■■□□□ 1.23
ATRX-211ENST00000623321 CCER1Q8TC90 406 aaPredicted RBP22.73■■□□□ 1.23
ATRX-211ENST00000623321 CCNB3Q8WWL7 1395 aa22.72■■□□□ 1.23
ATRX-211ENST00000623321 ARHGEF11O15085 1522 aa22.71■■□□□ 1.23
ATRX-211ENST00000623321 TROQ12816 1431 aaPredicted RBP22.71■■□□□ 1.23
ATRX-211ENST00000623321 PLEKHD1A6NEE1 506 aa22.71■■□□□ 1.23
ATRX-211ENST00000623321 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
ATRX-211ENST00000623321 FGD6Q6ZV73 1430 aa22.63■■□□□ 1.21
ATRX-211ENST00000623321 KDM5BQ9UGL1 1544 aa22.63■■□□□ 1.21
ATRX-211ENST00000623321 ADCY10Q96PN6 1610 aa22.62■■□□□ 1.21
ATRX-211ENST00000623321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.61■■□□□ 1.21
ATRX-211ENST00000623321 FAM50AQ14320 339 aaKnown RBP22.59■■□□□ 1.21
ATRX-211ENST00000623321 ZCCHC11Q5TAX3 1644 aaKnown RBP22.58■■□□□ 1.21
ATRX-211ENST00000623321 KIF14Q15058 1648 aa22.57■■□□□ 1.2
ATRX-211ENST00000623321 MIA2Q96PC5 1412 aa22.57■■□□□ 1.2
ATRX-211ENST00000623321 PTPN23Q9H3S7 1636 aa22.52■■□□□ 1.2
ATRX-211ENST00000623321 ABCC10Q5T3U5 1492 aa22.51■■□□□ 1.19
ATRX-211ENST00000623321 ITGAEP38570 1179 aa22.51■■□□□ 1.19
ATRX-211ENST00000623321 TCOF1Q13428 1488 aaKnown RBP22.5■■□□□ 1.19
ATRX-211ENST00000623321 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
ATRX-211ENST00000623321 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
ATRX-211ENST00000623321 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
ATRX-211ENST00000623321 GPATCH8Q9UKJ3 1502 aaKnown RBP22.5■■□□□ 1.19
ATRX-211ENST00000623321 ITSN2Q9NZM3 1697 aa22.48■■□□□ 1.19
ATRX-211ENST00000623321 NPM1P06748 294 aaKnown RBP eCLIP22.47■■□□□ 1.19
ATRX-211ENST00000623321 CFDP1Q9UEE9 299 aaPredicted RBP22.46■■□□□ 1.19
ATRX-211ENST00000623321 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
ATRX-211ENST00000623321 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
ATRX-211ENST00000623321 CDC42BPAQ5VT25 1732 aa22.43■■□□□ 1.18
ATRX-211ENST00000623321 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.42■■□□□ 1.18
ATRX-211ENST00000623321 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
ATRX-211ENST00000623321 ASXL2Q76L83 1435 aa22.39■■□□□ 1.17
ATRX-211ENST00000623321 ZNF644Q9H582 1327 aaPredicted RBP22.39■■□□□ 1.17
ATRX-211ENST00000623321 TTC37Q6PGP7 1564 aa22.38■■□□□ 1.17
ATRX-211ENST00000623321 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms