RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
PSME3-217ENST00000622892 SUPT16HQ9Y5B9 1047 aaKnown RBP18.94■□□□□ 0.62
PSME3-217ENST00000622892 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.624e-7■■■■□ 21.8
PSME3-217ENST00000622892 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
PSME3-217ENST00000622892 FBLN2P98095 1184 aa18.91■□□□□ 0.62
PSME3-217ENST00000622892 KANK4Q5T7N3 995 aaPredicted RBP18.89■□□□□ 0.61
PSME3-217ENST00000622892 DHX57Q6P158 1386 aaKnown RBP18.88■□□□□ 0.61
PSME3-217ENST00000622892 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
PSME3-217ENST00000622892 ITGAEP38570 1179 aa18.87■□□□□ 0.61
PSME3-217ENST00000622892 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
PSME3-217ENST00000622892 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
PSME3-217ENST00000622892 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
PSME3-217ENST00000622892 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
PSME3-217ENST00000622892 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.6
PSME3-217ENST00000622892 ARID3CA6NKF2 412 aa18.77■□□□□ 0.59
PSME3-217ENST00000622892 TSHZ2Q9NRE2 1034 aa18.76■□□□□ 0.59
PSME3-217ENST00000622892 BCANQ96GW7 911 aa18.75■□□□□ 0.59
PSME3-217ENST00000622892 ARAP1Q96P48 1450 aa18.74■□□□□ 0.59
PSME3-217ENST00000622892 TARBP1Q13395 1621 aaKnown RBP18.73■□□□□ 0.59
PSME3-217ENST00000622892 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
PSME3-217ENST00000622892 ARHGAP35Q9NRY4 1499 aa18.7■□□□□ 0.58
PSME3-217ENST00000622892 WDR62O43379 1518 aa18.69■□□□□ 0.58
PSME3-217ENST00000622892 ABCA5Q8WWZ7 1642 aa18.68■□□□□ 0.58
PSME3-217ENST00000622892 FHOD3Q2V2M9 1422 aa18.68■□□□□ 0.58
PSME3-217ENST00000622892 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
PSME3-217ENST00000622892 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
PSME3-217ENST00000622892 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
PSME3-217ENST00000622892 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
PSME3-217ENST00000622892 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
PSME3-217ENST00000622892 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
PSME3-217ENST00000622892 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
PSME3-217ENST00000622892 CCNB3Q8WWL7 1395 aa18.6■□□□□ 0.57
PSME3-217ENST00000622892 CUL7Q14999 1698 aa18.59■□□□□ 0.57
PSME3-217ENST00000622892 FKBP8Q14318 412 aa18.59■□□□□ 0.57
PSME3-217ENST00000622892 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
PSME3-217ENST00000622892 HIRIP3Q9BW71 556 aaPredicted RBP18.59■□□□□ 0.57
PSME3-217ENST00000622892 SIN3AQ96ST3 1273 aa18.57■□□□□ 0.56
PSME3-217ENST00000622892 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
PSME3-217ENST00000622892 ANP32EQ9BTT0 268 aa18.56■□□□□ 0.56
PSME3-217ENST00000622892 FHAD1B1AJZ9 1412 aa18.55■□□□□ 0.56
PSME3-217ENST00000622892 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
PSME3-217ENST00000622892 TRIM52Q96A61 297 aa18.5■□□□□ 0.55
PSME3-217ENST00000622892 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
PSME3-217ENST00000622892 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
PSME3-217ENST00000622892 CTTNBP2Q8WZ74 1663 aa18.48■□□□□ 0.55
PSME3-217ENST00000622892 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
PSME3-217ENST00000622892 MAPKBP1O60336 1514 aa18.42■□□□□ 0.54
PSME3-217ENST00000622892 GRIN2AQ12879 1464 aa18.41■□□□□ 0.54
PSME3-217ENST00000622892 NEFLP07196 543 aa18.4■□□□□ 0.54
PSME3-217ENST00000622892 SETD5Q9C0A6 1442 aa18.38■□□□□ 0.53
PSME3-217ENST00000622892 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
PSME3-217ENST00000622892 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
PSME3-217ENST00000622892 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
PSME3-217ENST00000622892 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
PSME3-217ENST00000622892 JPH4Q96JJ6 628 aa18.35■□□□□ 0.53
PSME3-217ENST00000622892 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
PSME3-217ENST00000622892 ANP32CO43423 234 aa18.33■□□□□ 0.53
PSME3-217ENST00000622892 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.53
PSME3-217ENST00000622892 FMN1Q68DA7 1419 aa18.32■□□□□ 0.52
PSME3-217ENST00000622892 MTUS2Q5JR59 1369 aa18.31■□□□□ 0.52
PSME3-217ENST00000622892 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
PSME3-217ENST00000622892 EFCAB5A4FU69 1503 aa18.31■□□□□ 0.52
PSME3-217ENST00000622892 TIAM1Q13009 1591 aa18.29■□□□□ 0.52
PSME3-217ENST00000622892 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
PSME3-217ENST00000622892 KIAA0586Q9BVV6 1533 aa18.28■□□□□ 0.52
PSME3-217ENST00000622892 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.51
PSME3-217ENST00000622892 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
PSME3-217ENST00000622892 CASKIN1Q8WXD9 1431 aa18.26■□□□□ 0.51
PSME3-217ENST00000622892 SAMD9Q5K651 1589 aa18.25■□□□□ 0.51
PSME3-217ENST00000622892 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
PSME3-217ENST00000622892 CCER2I3L3R5 266 aa18.23■□□□□ 0.51
PSME3-217ENST00000622892 FYCO1Q9BQS8 1478 aa18.23■□□□□ 0.51
PSME3-217ENST00000622892 DISP1Q96F81 1524 aa18.22■□□□□ 0.51
PSME3-217ENST00000622892 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
PSME3-217ENST00000622892 CHD1O14646 1710 aa18.19■□□□□ 0.5
PSME3-217ENST00000622892 HNRNPUQ00839 825 aaKnown RBP eCLIP18.18■□□□□ 0.5
PSME3-217ENST00000622892 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
PSME3-217ENST00000622892 MSH5O43196 834 aa18.17■□□□□ 0.5
PSME3-217ENST00000622892 TIMELESSQ9UNS1 1208 aa18.17■□□□□ 0.5
PSME3-217ENST00000622892 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
PSME3-217ENST00000622892 LRRIQ1Q96JM4 1722 aa18.17■□□□□ 0.5
PSME3-217ENST00000622892 TONSLQ96HA7 1378 aa18.16■□□□□ 0.5
PSME3-217ENST00000622892 CHIC2Q9UKJ5 165 aa18.16■□□□□ 0.5
PSME3-217ENST00000622892 NUP160Q12769 1436 aa18.15■□□□□ 0.5
PSME3-217ENST00000622892 UGGT2Q9NYU1 1516 aa18.15■□□□□ 0.5
PSME3-217ENST00000622892 CARMIL2Q6F5E8 1435 aa18.14■□□□□ 0.49
PSME3-217ENST00000622892 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
PSME3-217ENST00000622892 CFAP43Q8NDM7 1665 aa18.11■□□□□ 0.49
PSME3-217ENST00000622892 EPRSP07814 1512 aaKnown RBP18.11■□□□□ 0.49
PSME3-217ENST00000622892 MAGI3Q5TCQ9 1506 aa18.11■□□□□ 0.49
PSME3-217ENST00000622892 MAP3K1Q13233 1512 aa18.1■□□□□ 0.49
PSME3-217ENST00000622892 ERCC6L2Q5T890 1561 aa18.08■□□□□ 0.49
PSME3-217ENST00000622892 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
PSME3-217ENST00000622892 HECW1Q76N89 1606 aa18.06■□□□□ 0.48
PSME3-217ENST00000622892 NUP153P49790 1475 aaKnown RBP18.06■□□□□ 0.48
PSME3-217ENST00000622892 PTPRGP23470 1445 aa18.06■□□□□ 0.48
PSME3-217ENST00000622892 CDK11AQ9UQ88 783 aaPredicted RBP18.05■□□□□ 0.48
PSME3-217ENST00000622892 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
PSME3-217ENST00000622892 RRP7BPQ9NSQ0 103 aa18.04■□□□□ 0.48
PSME3-217ENST00000622892 RAPGEF6Q8TEU7 1601 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms