RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 ERICH3Q5RHP9 1530 aa11.22□□□□□ -0.61
CBWD3-219ENST00000622817 RAPGEF2Q9Y4G8 1499 aa11.22□□□□□ -0.61
CBWD3-219ENST00000622817 ABCA5Q8WWZ7 1642 aa11.21□□□□□ -0.61
CBWD3-219ENST00000622817 GAPVD1Q14C86 1478 aa11.21□□□□□ -0.62
CBWD3-219ENST00000622817 CARMIL1Q5VZK9 1371 aa11.2□□□□□ -0.62
CBWD3-219ENST00000622817 CUL7Q14999 1698 aa11.17□□□□□ -0.62
CBWD3-219ENST00000622817 AQRO60306 1485 aaKnown RBP eCLIP11.16□□□□□ -0.62
CBWD3-219ENST00000622817 CEP162Q5TB80 1403 aa11.15□□□□□ -0.62
CBWD3-219ENST00000622817 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-219ENST00000622817 GRIN2BQ13224 1484 aa11.14□□□□□ -0.63
CBWD3-219ENST00000622817 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
CBWD3-219ENST00000622817 PBRM1Q86U86 1689 aa11.12□□□□□ -0.63
CBWD3-219ENST00000622817 EIF4G3O43432 1585 aaKnown RBP11.1□□□□□ -0.63
CBWD3-219ENST00000622817 FHAD1B1AJZ9 1412 aa11.1□□□□□ -0.63
CBWD3-219ENST00000622817 CLIP1P30622 1438 aa11.09□□□□□ -0.63
CBWD3-219ENST00000622817 ADAMTS12P58397 1594 aa11.07□□□□□ -0.64
CBWD3-219ENST00000622817 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
CBWD3-219ENST00000622817 SNAPC4Q5SXM2 1469 aa11.05□□□□□ -0.64
CBWD3-219ENST00000622817 RANGAP1P46060 587 aaPredicted RBP11.04□□□□□ -0.64
CBWD3-219ENST00000622817 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
CBWD3-219ENST00000622817 SYNJ2O15056 1496 aa11.01□□□□□ -0.65
CBWD3-219ENST00000622817 CACNB1Q02641 598 aaPredicted RBP11.01□□□□□ -0.65
CBWD3-219ENST00000622817 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
CBWD3-219ENST00000622817 GRIN2AQ12879 1464 aa10.99□□□□□ -0.65
CBWD3-219ENST00000622817 VPS8Q8N3P4 1428 aa10.98□□□□□ -0.65
CBWD3-219ENST00000622817 ARHGAP35Q9NRY4 1499 aa10.98□□□□□ -0.65
CBWD3-219ENST00000622817 ARAP1Q96P48 1450 aa10.97□□□□□ -0.65
CBWD3-219ENST00000622817 EFCAB5A4FU69 1503 aa10.96□□□□□ -0.65
CBWD3-219ENST00000622817 FBLN2P98095 1184 aa10.95□□□□□ -0.66
CBWD3-219ENST00000622817 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
CBWD3-219ENST00000622817 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
CBWD3-219ENST00000622817 IQGAP2Q13576 1575 aa10.94□□□□□ -0.66
CBWD3-219ENST00000622817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.66
CBWD3-219ENST00000622817 NUP160Q12769 1436 aa10.92□□□□□ -0.66
CBWD3-219ENST00000622817 SAMD9Q5K651 1589 aa10.9□□□□□ -0.66
CBWD3-219ENST00000622817 APLP2Q06481 763 aa10.9□□□□□ -0.66
CBWD3-219ENST00000622817 P3H3Q8IVL6 736 aa10.9□□□□□ -0.66
CBWD3-219ENST00000622817 CEP170Q5SW79 1584 aa10.9□□□□□ -0.66
CBWD3-219ENST00000622817 UGGT2Q9NYU1 1516 aa10.9□□□□□ -0.66
CBWD3-219ENST00000622817 FHOD3Q2V2M9 1422 aa10.88□□□□□ -0.67
CBWD3-219ENST00000622817 FMN1Q68DA7 1419 aa10.87□□□□□ -0.67
CBWD3-219ENST00000622817 CHD1O14646 1710 aa10.87□□□□□ -0.67
CBWD3-219ENST00000622817 TRIM26Q12899 539 aaPredicted RBP10.86□□□□□ -0.67
CBWD3-219ENST00000622817 PPARGC1BQ86YN6 1023 aaKnown RBP10.85□□□□□ -0.67
CBWD3-219ENST00000622817 JPH4Q96JJ6 628 aa10.85□□□□□ -0.67
CBWD3-219ENST00000622817 CASKIN1Q8WXD9 1431 aa10.84□□□□□ -0.67
CBWD3-219ENST00000622817 DISP1Q96F81 1524 aa10.83□□□□□ -0.68
CBWD3-219ENST00000622817 FYCO1Q9BQS8 1478 aa10.83□□□□□ -0.68
CBWD3-219ENST00000622817 CARMIL2Q6F5E8 1435 aa10.82□□□□□ -0.68
CBWD3-219ENST00000622817 KIAA0556O60303 1618 aa10.82□□□□□ -0.68
CBWD3-219ENST00000622817 MAP3K1Q13233 1512 aa10.81□□□□□ -0.68
CBWD3-219ENST00000622817 PCF11O94913 1555 aaKnown RBP10.81□□□□□ -0.68
CBWD3-219ENST00000622817 PCGF6Q9BYE7 350 aa10.81□□□□□ -0.68
CBWD3-219ENST00000622817 SLC4A2P04920 1241 aa10.8□□□□□ -0.68
CBWD3-219ENST00000622817 ATP1B4Q9UN42 357 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-219ENST00000622817 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
CBWD3-219ENST00000622817 TIAM1Q13009 1591 aa10.78□□□□□ -0.68
CBWD3-219ENST00000622817 TTBK1Q5TCY1 1321 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-219ENST00000622817 PRG4Q92954 1404 aaPredicted RBP10.77□□□□□ -0.69
CBWD3-219ENST00000622817 KANK4Q5T7N3 995 aaPredicted RBP10.76□□□□□ -0.69
CBWD3-219ENST00000622817 CLASP1Q7Z460 1538 aa10.76□□□□□ -0.69
CBWD3-219ENST00000622817 SHROOM2Q13796 1616 aa10.76□□□□□ -0.69
CBWD3-219ENST00000622817 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
CBWD3-219ENST00000622817 HECW1Q76N89 1606 aa10.75□□□□□ -0.69
CBWD3-219ENST00000622817 CCDC18Q5T9S5 1454 aa10.73□□□□□ -0.69
CBWD3-219ENST00000622817 LRRC9Q6ZRR7 1453 aa10.73□□□□□ -0.69
CBWD3-219ENST00000622817 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
CBWD3-219ENST00000622817 PTPRGP23470 1445 aa10.71□□□□□ -0.69
CBWD3-219ENST00000622817 RAPGEF6Q8TEU7 1601 aa10.71□□□□□ -0.69
CBWD3-219ENST00000622817 EPRSP07814 1512 aaKnown RBP10.71□□□□□ -0.7
CBWD3-219ENST00000622817 LRRIQ1Q96JM4 1722 aa10.69□□□□□ -0.7
CBWD3-219ENST00000622817 MTUS2Q5JR59 1369 aa10.69□□□□□ -0.7
CBWD3-219ENST00000622817 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
CBWD3-219ENST00000622817 PLB1Q6P1J6 1458 aa10.69□□□□□ -0.7
CBWD3-219ENST00000622817 ABCA8O94911 1581 aa10.67□□□□□ -0.7
CBWD3-219ENST00000622817 ERCC6L2Q5T890 1561 aa10.67□□□□□ -0.7
CBWD3-219ENST00000622817 CDK11AQ9UQ88 783 aaPredicted RBP10.66□□□□□ -0.7
CBWD3-219ENST00000622817 CDK13Q14004 1512 aaKnown RBP10.66□□□□□ -0.7
CBWD3-219ENST00000622817 EHBP1L1Q8N3D4 1523 aa10.66□□□□□ -0.7
CBWD3-219ENST00000622817 UACAQ9BZF9 1416 aa10.65□□□□□ -0.7
CBWD3-219ENST00000622817 ARID3CA6NKF2 412 aa10.64□□□□□ -0.71
CBWD3-219ENST00000622817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.64□□□□□ -0.71
CBWD3-219ENST00000622817 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
CBWD3-219ENST00000622817 RRBP1Q9P2E9 1410 aaKnown RBP10.64□□□□□ -0.71
CBWD3-219ENST00000622817 PHLDB1Q86UU1 1377 aa10.62□□□□□ -0.71
CBWD3-219ENST00000622817 SUPT6HQ7KZ85 1726 aaKnown RBP10.62□□□□□ -0.71
CBWD3-219ENST00000622817 MAGI3Q5TCQ9 1506 aa10.62□□□□□ -0.71
CBWD3-219ENST00000622817 CCNB3Q8WWL7 1395 aa10.62□□□□□ -0.71
CBWD3-219ENST00000622817 ATP10BO94823 1461 aa10.61□□□□□ -0.71
CBWD3-219ENST00000622817 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
CBWD3-219ENST00000622817 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
CBWD3-219ENST00000622817 ABCC2Q92887 1545 aa10.6□□□□□ -0.71
CBWD3-219ENST00000622817 UHRF1BP1LA0JNW5 1464 aa10.6□□□□□ -0.71
CBWD3-219ENST00000622817 TROQ12816 1431 aaPredicted RBP10.59□□□□□ -0.71
CBWD3-219ENST00000622817 ARHGEF11O15085 1522 aa10.59□□□□□ -0.71
CBWD3-219ENST00000622817 PLEKHD1A6NEE1 506 aa10.59□□□□□ -0.71
CBWD3-219ENST00000622817 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
CBWD3-219ENST00000622817 SPINK5Q9NQ38 1064 aaPredicted RBP10.57□□□□□ -0.72
CBWD3-219ENST00000622817 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
CBWD3-219ENST00000622817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms