RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.56
CHD1L-210ENST00000622533 RAB3GAP2Q9H2M9 1393 aa18.58■□□□□ 0.56
CHD1L-210ENST00000622533 ITGAEP38570 1179 aa18.57■□□□□ 0.56
CHD1L-210ENST00000622533 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
CHD1L-210ENST00000622533 LRRC9Q6ZRR7 1453 aa18.56■□□□□ 0.56
CHD1L-210ENST00000622533 SETD5Q9C0A6 1442 aa18.56■□□□□ 0.56
CHD1L-210ENST00000622533 CADPSQ9ULU8 1353 aa18.54■□□□□ 0.56
CHD1L-210ENST00000622533 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
CHD1L-210ENST00000622533 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.55
CHD1L-210ENST00000622533 MSH5O43196 834 aa18.51■□□□□ 0.55
CHD1L-210ENST00000622533 TIMELESSQ9UNS1 1208 aa18.51■□□□□ 0.55
CHD1L-210ENST00000622533 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
CHD1L-210ENST00000622533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.54
CHD1L-210ENST00000622533 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
CHD1L-210ENST00000622533 NEFLP07196 543 aa18.45■□□□□ 0.54
CHD1L-210ENST00000622533 EFCAB5A4FU69 1503 aa18.44■□□□□ 0.54
CHD1L-210ENST00000622533 FYCO1Q9BQS8 1478 aa18.42■□□□□ 0.54
CHD1L-210ENST00000622533 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
CHD1L-210ENST00000622533 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.546e-7■■■■■ 27.9
CHD1L-210ENST00000622533 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
CHD1L-210ENST00000622533 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
CHD1L-210ENST00000622533 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
CHD1L-210ENST00000622533 CASKIN1Q8WXD9 1431 aa18.37■□□□□ 0.53
CHD1L-210ENST00000622533 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
CHD1L-210ENST00000622533 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
CHD1L-210ENST00000622533 CUL7Q14999 1698 aa18.36■□□□□ 0.53
CHD1L-210ENST00000622533 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
CHD1L-210ENST00000622533 DNMBPQ6XZF7 1577 aa18.35■□□□□ 0.53
CHD1L-210ENST00000622533 PRKCSHP14314 528 aaPredicted RBP18.35■□□□□ 0.53
CHD1L-210ENST00000622533 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
CHD1L-210ENST00000622533 ERICH6Q7L0X2 663 aa18.32■□□□□ 0.52
CHD1L-210ENST00000622533 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
CHD1L-210ENST00000622533 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
CHD1L-210ENST00000622533 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
CHD1L-210ENST00000622533 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
CHD1L-210ENST00000622533 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
CHD1L-210ENST00000622533 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
CHD1L-210ENST00000622533 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
CHD1L-210ENST00000622533 FGD6Q6ZV73 1430 aa18.26■□□□□ 0.51
CHD1L-210ENST00000622533 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
CHD1L-210ENST00000622533 ATP1B4Q9UN42 357 aaPredicted RBP18.26■□□□□ 0.51
CHD1L-210ENST00000622533 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
CHD1L-210ENST00000622533 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
CHD1L-210ENST00000622533 P3H3Q8IVL6 736 aa18.25■□□□□ 0.51
CHD1L-210ENST00000622533 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
CHD1L-210ENST00000622533 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
CHD1L-210ENST00000622533 ANP32CO43423 234 aa18.22■□□□□ 0.51
CHD1L-210ENST00000622533 HFM1A2PYH4 1435 aa18.21■□□□□ 0.51
CHD1L-210ENST00000622533 UACAQ9BZF9 1416 aa18.21■□□□□ 0.51
CHD1L-210ENST00000622533 TONSLQ96HA7 1378 aa18.21■□□□□ 0.5
CHD1L-210ENST00000622533 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
CHD1L-210ENST00000622533 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
CHD1L-210ENST00000622533 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
CHD1L-210ENST00000622533 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
CHD1L-210ENST00000622533 MTUS2Q5JR59 1369 aa18.18■□□□□ 0.5
CHD1L-210ENST00000622533 DEKP35659 375 aaKnown RBP18.17■□□□□ 0.5
CHD1L-210ENST00000622533 SAMD9Q5K651 1589 aa18.16■□□□□ 0.5
CHD1L-210ENST00000622533 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
CHD1L-210ENST00000622533 MYOM3Q5VTT5 1437 aa18.13■□□□□ 0.49
CHD1L-210ENST00000622533 EHBP1L1Q8N3D4 1523 aa18.12■□□□□ 0.49
CHD1L-210ENST00000622533 SUPT6HQ7KZ85 1726 aaKnown RBP18.12■□□□□ 0.49
CHD1L-210ENST00000622533 KIF21AQ7Z4S6 1674 aa18.11■□□□□ 0.49
CHD1L-210ENST00000622533 GRIN2BQ13224 1484 aa18.1■□□□□ 0.49
CHD1L-210ENST00000622533 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
CHD1L-210ENST00000622533 NAIPQ13075 1403 aa18.09■□□□□ 0.49
CHD1L-210ENST00000622533 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
CHD1L-210ENST00000622533 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
CHD1L-210ENST00000622533 PTPRKQ15262 1439 aa18.07■□□□□ 0.48
CHD1L-210ENST00000622533 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
CHD1L-210ENST00000622533 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
CHD1L-210ENST00000622533 LRRIQ1Q96JM4 1722 aa18.05■□□□□ 0.48
CHD1L-210ENST00000622533 NBR1Q14596 966 aa18.04■□□□□ 0.48
CHD1L-210ENST00000622533 ANO8Q9HCE9 1232 aaPredicted RBP18.04■□□□□ 0.48
CHD1L-210ENST00000622533 GAPVD1Q14C86 1478 aa18.04■□□□□ 0.48
CHD1L-210ENST00000622533 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
CHD1L-210ENST00000622533 ARHGEF11O15085 1522 aa18.04■□□□□ 0.48
CHD1L-210ENST00000622533 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
CHD1L-210ENST00000622533 AKNAQ7Z591 1439 aa18.03■□□□□ 0.48
CHD1L-210ENST00000622533 NESP48681 1621 aa18.02■□□□□ 0.48
CHD1L-210ENST00000622533 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
CHD1L-210ENST00000622533 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
CHD1L-210ENST00000622533 GCC2Q8IWJ2 1684 aa18■□□□□ 0.47
CHD1L-210ENST00000622533 HECW1Q76N89 1606 aa17.99■□□□□ 0.47
CHD1L-210ENST00000622533 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
CHD1L-210ENST00000622533 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
CHD1L-210ENST00000622533 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
CHD1L-210ENST00000622533 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
CHD1L-210ENST00000622533 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
CHD1L-210ENST00000622533 MIA2Q96PC5 1412 aa17.94■□□□□ 0.46
CHD1L-210ENST00000622533 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
CHD1L-210ENST00000622533 NOP58Q9Y2X3 529 aaKnown RBP17.91■□□□□ 0.46
CHD1L-210ENST00000622533 MAGI3Q5TCQ9 1506 aa17.9■□□□□ 0.46
CHD1L-210ENST00000622533 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.46
CHD1L-210ENST00000622533 ERICH6BQ5W0A0 696 aa17.89■□□□□ 0.45
CHD1L-210ENST00000622533 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
CHD1L-210ENST00000622533 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
CHD1L-210ENST00000622533 EPRSP07814 1512 aaKnown RBP17.87■□□□□ 0.45
CHD1L-210ENST00000622533 IQGAP2Q13576 1575 aa17.87■□□□□ 0.45
CHD1L-210ENST00000622533 TARBP1Q13395 1621 aaKnown RBP17.86■□□□□ 0.45
CHD1L-210ENST00000622533 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms