RNA–Protein interactions for RNA: ENST00000622328.1

LINC01138-206, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 2 BASIC

Gene LINC01138, Length 2,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-206ENST00000622328 EFCAB5A4FU69 1503 aa21.35■■□□□ 1.01
LINC01138-206ENST00000622328 TOPBP1Q92547 1522 aa21.33■■□□□ 1.01
LINC01138-206ENST00000622328 CUL7Q14999 1698 aa21.33■■□□□ 1
LINC01138-206ENST00000622328 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
LINC01138-206ENST00000622328 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
LINC01138-206ENST00000622328 RAB3GAP2Q9H2M9 1393 aa21.31■■□□□ 1
LINC01138-206ENST00000622328 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
LINC01138-206ENST00000622328 FYCO1Q9BQS8 1478 aa21.28■■□□□ 1
LINC01138-206ENST00000622328 PCF11O94913 1555 aaKnown RBP21.28■■□□□ 1
LINC01138-206ENST00000622328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.28■■□□□ 1
LINC01138-206ENST00000622328 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
LINC01138-206ENST00000622328 PHLDB1Q86UU1 1377 aa21.27■■□□□ 1
LINC01138-206ENST00000622328 MAPKBP1O60336 1514 aa21.26■□□□□ 0.99
LINC01138-206ENST00000622328 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
LINC01138-206ENST00000622328 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
LINC01138-206ENST00000622328 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
LINC01138-206ENST00000622328 CTTNBP2Q8WZ74 1663 aa21.23■□□□□ 0.99
LINC01138-206ENST00000622328 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
LINC01138-206ENST00000622328 ITGAEP38570 1179 aa21.19■□□□□ 0.98
LINC01138-206ENST00000622328 FHOD3Q2V2M9 1422 aa21.18■□□□□ 0.98
LINC01138-206ENST00000622328 FMN1Q68DA7 1419 aa21.18■□□□□ 0.98
LINC01138-206ENST00000622328 TIMELESSQ9UNS1 1208 aa21.18■□□□□ 0.98
LINC01138-206ENST00000622328 NESP48681 1621 aa21.15■□□□□ 0.98
LINC01138-206ENST00000622328 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
LINC01138-206ENST00000622328 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
LINC01138-206ENST00000622328 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
LINC01138-206ENST00000622328 FAM50AQ14320 339 aaKnown RBP21.1■□□□□ 0.97
LINC01138-206ENST00000622328 P3H3Q8IVL6 736 aa21.1■□□□□ 0.97
LINC01138-206ENST00000622328 SAMD9Q5K651 1589 aa21.09■□□□□ 0.97
LINC01138-206ENST00000622328 THOC2Q8NI27 1593 aaKnown RBP21.07■□□□□ 0.96
LINC01138-206ENST00000622328 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
LINC01138-206ENST00000622328 FGD6Q6ZV73 1430 aa21.05■□□□□ 0.96
LINC01138-206ENST00000622328 GAPVD1Q14C86 1478 aa21.04■□□□□ 0.96
LINC01138-206ENST00000622328 ATP1B4Q9UN42 357 aaPredicted RBP21.02■□□□□ 0.96
LINC01138-206ENST00000622328 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
LINC01138-206ENST00000622328 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
LINC01138-206ENST00000622328 KIF21AQ7Z4S6 1674 aa20.98■□□□□ 0.95
LINC01138-206ENST00000622328 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
LINC01138-206ENST00000622328 HFM1A2PYH4 1435 aa20.96■□□□□ 0.95
LINC01138-206ENST00000622328 SIN3AQ96ST3 1273 aa20.94■□□□□ 0.94
LINC01138-206ENST00000622328 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
LINC01138-206ENST00000622328 MYOM3Q5VTT5 1437 aa20.93■□□□□ 0.94
LINC01138-206ENST00000622328 PPP1R15AO75807 674 aaPredicted RBP20.93■□□□□ 0.94
LINC01138-206ENST00000622328 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
LINC01138-206ENST00000622328 UACAQ9BZF9 1416 aa20.92■□□□□ 0.94
LINC01138-206ENST00000622328 NCOA2Q15596 1464 aa20.92■□□□□ 0.94
LINC01138-206ENST00000622328 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
LINC01138-206ENST00000622328 SUPT6HQ7KZ85 1726 aaKnown RBP20.91■□□□□ 0.94
LINC01138-206ENST00000622328 CCDC18Q5T9S5 1454 aa20.9■□□□□ 0.94
LINC01138-206ENST00000622328 ARHGEF11O15085 1522 aa20.9■□□□□ 0.94
LINC01138-206ENST00000622328 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.93
LINC01138-206ENST00000622328 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
LINC01138-206ENST00000622328 UGGT2Q9NYU1 1516 aa20.86■□□□□ 0.93
LINC01138-206ENST00000622328 NAIPQ13075 1403 aa20.85■□□□□ 0.93
LINC01138-206ENST00000622328 TCOF1Q13428 1488 aaKnown RBP20.82■□□□□ 0.92
LINC01138-206ENST00000622328 HECW1Q76N89 1606 aa20.81■□□□□ 0.92
LINC01138-206ENST00000622328 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
LINC01138-206ENST00000622328 TONSLQ96HA7 1378 aa20.8■□□□□ 0.92
LINC01138-206ENST00000622328 AKNAQ7Z591 1439 aa20.8■□□□□ 0.92
LINC01138-206ENST00000622328 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
LINC01138-206ENST00000622328 DDX10Q13206 875 aaKnown RBP20.78■□□□□ 0.92
LINC01138-206ENST00000622328 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
LINC01138-206ENST00000622328 CCER2I3L3R5 266 aa20.77■□□□□ 0.91
LINC01138-206ENST00000622328 MAGI3Q5TCQ9 1506 aa20.76■□□□□ 0.91
LINC01138-206ENST00000622328 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
LINC01138-206ENST00000622328 MYT1Q01538 1121 aa20.76■□□□□ 0.91
LINC01138-206ENST00000622328 MIA2Q96PC5 1412 aa20.75■□□□□ 0.91
LINC01138-206ENST00000622328 GCC2Q8IWJ2 1684 aa20.73■□□□□ 0.91
LINC01138-206ENST00000622328 EPRSP07814 1512 aaKnown RBP20.73■□□□□ 0.91
LINC01138-206ENST00000622328 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
LINC01138-206ENST00000622328 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
LINC01138-206ENST00000622328 WDR62O43379 1518 aa20.69■□□□□ 0.9
LINC01138-206ENST00000622328 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
LINC01138-206ENST00000622328 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
LINC01138-206ENST00000622328 ANP32CO43423 234 aa20.66■□□□□ 0.9
LINC01138-206ENST00000622328 IFT140Q96RY7 1462 aa20.63■□□□□ 0.89
LINC01138-206ENST00000622328 KIAA0586Q9BVV6 1533 aa20.6■□□□□ 0.89
LINC01138-206ENST00000622328 DENND4BO75064 1496 aaPredicted RBP20.6■□□□□ 0.89
LINC01138-206ENST00000622328 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
LINC01138-206ENST00000622328 CDK13Q14004 1512 aaKnown RBP20.59■□□□□ 0.89
LINC01138-206ENST00000622328 HIRIP3Q9BW71 556 aaPredicted RBP20.57■□□□□ 0.88
LINC01138-206ENST00000622328 RRP7BPQ9NSQ0 103 aa20.57■□□□□ 0.88
LINC01138-206ENST00000622328 KIAA0556O60303 1618 aa20.55■□□□□ 0.88
LINC01138-206ENST00000622328 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
LINC01138-206ENST00000622328 KDM6BO15054 1643 aa20.52■□□□□ 0.87
LINC01138-206ENST00000622328 MPHOSPH9Q99550 1183 aa20.51■□□□□ 0.87
LINC01138-206ENST00000622328 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
LINC01138-206ENST00000622328 CHIC2Q9UKJ5 165 aa20.51■□□□□ 0.87
LINC01138-206ENST00000622328 DAPK1P53355 1430 aa20.51■□□□□ 0.87
LINC01138-206ENST00000622328 TRIM52Q96A61 297 aa20.49■□□□□ 0.87
LINC01138-206ENST00000622328 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
LINC01138-206ENST00000622328 ZNF608Q9ULD9 1512 aaPredicted RBP20.49■□□□□ 0.87
LINC01138-206ENST00000622328 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
LINC01138-206ENST00000622328 GRIN2AQ12879 1464 aa20.48■□□□□ 0.87
LINC01138-206ENST00000622328 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
LINC01138-206ENST00000622328 ABCC5O15440 1437 aa20.47■□□□□ 0.87
LINC01138-206ENST00000622328 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
LINC01138-206ENST00000622328 RPRD2Q5VT52 1461 aaKnown RBP20.44■□□□□ 0.86
LINC01138-206ENST00000622328 ANKRD30BQ9BXX2 1392 aa20.44■□□□□ 0.86
LINC01138-206ENST00000622328 HSPA5P11021 654 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms