RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.71
TRIM49B-202ENST00000622138 KIF27Q86VH2 1401 aa10.63□□□□□ -0.71
TRIM49B-202ENST00000622138 CFTRP13569 1480 aa10.63□□□□□ -0.71
TRIM49B-202ENST00000622138 ARHGAP35Q9NRY4 1499 aa10.62□□□□□ -0.71
TRIM49B-202ENST00000622138 RRBP1Q9P2E9 1410 aaKnown RBP10.62□□□□□ -0.71
TRIM49B-202ENST00000622138 CUX2O14529 1486 aa10.57□□□□□ -0.72
TRIM49B-202ENST00000622138 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
TRIM49B-202ENST00000622138 PRDM2Q13029 1718 aa10.57□□□□□ -0.72
TRIM49B-202ENST00000622138 NEFLP07196 543 aa10.55□□□□□ -0.72
TRIM49B-202ENST00000622138 FKBP8Q14318 412 aa10.55□□□□□ -0.72
TRIM49B-202ENST00000622138 CCNB3Q8WWL7 1395 aa10.55□□□□□ -0.72
TRIM49B-202ENST00000622138 BCANQ96GW7 911 aa10.55□□□□□ -0.72
TRIM49B-202ENST00000622138 IGF1RP08069 1367 aa10.53□□□□□ -0.72
TRIM49B-202ENST00000622138 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.72
TRIM49B-202ENST00000622138 TIAM1Q13009 1591 aa10.52□□□□□ -0.73
TRIM49B-202ENST00000622138 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
TRIM49B-202ENST00000622138 ITGAEP38570 1179 aa10.51□□□□□ -0.73
TRIM49B-202ENST00000622138 FGD5Q6ZNL6 1462 aa10.51□□□□□ -0.73
TRIM49B-202ENST00000622138 MAPKBP1O60336 1514 aa10.51□□□□□ -0.73
TRIM49B-202ENST00000622138 RAB3GAP2Q9H2M9 1393 aa10.49□□□□□ -0.73
TRIM49B-202ENST00000622138 CARMIL1Q5VZK9 1371 aa10.47□□□□□ -0.73
TRIM49B-202ENST00000622138 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
TRIM49B-202ENST00000622138 PCF11O94913 1555 aaKnown RBP10.46□□□□□ -0.73
TRIM49B-202ENST00000622138 MAP3K1Q13233 1512 aa10.46□□□□□ -0.73
TRIM49B-202ENST00000622138 PHLDB1Q86UU1 1377 aa10.46□□□□□ -0.73
TRIM49B-202ENST00000622138 LRRC9Q6ZRR7 1453 aa10.46□□□□□ -0.74
TRIM49B-202ENST00000622138 CFAP43Q8NDM7 1665 aa10.45□□□□□ -0.74
TRIM49B-202ENST00000622138 CDK11AQ9UQ88 783 aaPredicted RBP10.45□□□□□ -0.74
TRIM49B-202ENST00000622138 SETD5Q9C0A6 1442 aa10.41□□□□□ -0.74
TRIM49B-202ENST00000622138 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
TRIM49B-202ENST00000622138 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
TRIM49B-202ENST00000622138 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
TRIM49B-202ENST00000622138 NOP58Q9Y2X3 529 aaKnown RBP10.41□□□□□ -0.74
TRIM49B-202ENST00000622138 RAD54L2Q9Y4B4 1467 aa10.4□□□□□ -0.74
TRIM49B-202ENST00000622138 WDR97A6NE52 1622 aa10.4□□□□□ -0.74
TRIM49B-202ENST00000622138 FANCD2Q9BXW9 1451 aa10.4□□□□□ -0.74
TRIM49B-202ENST00000622138 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
TRIM49B-202ENST00000622138 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
TRIM49B-202ENST00000622138 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
TRIM49B-202ENST00000622138 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
TRIM49B-202ENST00000622138 FHAD1B1AJZ9 1412 aa10.38□□□□□ -0.75
TRIM49B-202ENST00000622138 FAM50AQ14320 339 aaKnown RBP10.38□□□□□ -0.75
TRIM49B-202ENST00000622138 SIN3AQ96ST3 1273 aa10.38□□□□□ -0.75
TRIM49B-202ENST00000622138 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
TRIM49B-202ENST00000622138 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
TRIM49B-202ENST00000622138 C11orf95C9JLR9 678 aaPredicted RBP10.36□□□□□ -0.75
TRIM49B-202ENST00000622138 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
TRIM49B-202ENST00000622138 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
TRIM49B-202ENST00000622138 TOPBP1Q92547 1522 aa10.36□□□□□ -0.75
TRIM49B-202ENST00000622138 NESP48681 1621 aa10.35□□□□□ -0.75
TRIM49B-202ENST00000622138 ATP1B4Q9UN42 357 aaPredicted RBP10.34□□□□□ -0.75
TRIM49B-202ENST00000622138 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
TRIM49B-202ENST00000622138 EFCAB5A4FU69 1503 aa10.34□□□□□ -0.75
TRIM49B-202ENST00000622138 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.76
TRIM49B-202ENST00000622138 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
TRIM49B-202ENST00000622138 NBR1Q14596 966 aa10.33□□□□□ -0.76
TRIM49B-202ENST00000622138 GLIPR1L2Q4G1C9 344 aa10.33□□□□□ -0.76
TRIM49B-202ENST00000622138 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM49B-202ENST00000622138 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
TRIM49B-202ENST00000622138 CUL7Q14999 1698 aa10.32□□□□□ -0.76
TRIM49B-202ENST00000622138 LRRIQ1Q96JM4 1722 aa10.31□□□□□ -0.76
TRIM49B-202ENST00000622138 WASHC2AQ641Q2 1341 aa10.31□□□□□ -0.76
TRIM49B-202ENST00000622138 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
TRIM49B-202ENST00000622138 DDX10Q13206 875 aaKnown RBP10.29□□□□□ -0.76
TRIM49B-202ENST00000622138 PTPRKQ15262 1439 aa10.29□□□□□ -0.76
TRIM49B-202ENST00000622138 FGD6Q6ZV73 1430 aa10.29□□□□□ -0.76
TRIM49B-202ENST00000622138 HIRIP3Q9BW71 556 aaPredicted RBP10.29□□□□□ -0.76
TRIM49B-202ENST00000622138 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
TRIM49B-202ENST00000622138 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
TRIM49B-202ENST00000622138 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
TRIM49B-202ENST00000622138 WASHC2CQ9Y4E1 1318 aa10.28□□□□□ -0.76
TRIM49B-202ENST00000622138 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
TRIM49B-202ENST00000622138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.27□□□□□ -0.76
TRIM49B-202ENST00000622138 SAMD9Q5K651 1589 aa10.27□□□□□ -0.77
TRIM49B-202ENST00000622138 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
TRIM49B-202ENST00000622138 ABCA5Q8WWZ7 1642 aa10.26□□□□□ -0.77
TRIM49B-202ENST00000622138 CCDC18Q5T9S5 1454 aa10.26□□□□□ -0.77
TRIM49B-202ENST00000622138 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
TRIM49B-202ENST00000622138 PTPN23Q9H3S7 1636 aa10.26□□□□□ -0.77
TRIM49B-202ENST00000622138 SENP3Q9H4L4 574 aaPredicted RBP10.25□□□□□ -0.77
TRIM49B-202ENST00000622138 FMN1Q68DA7 1419 aa10.25□□□□□ -0.77
TRIM49B-202ENST00000622138 PAK3O75914 559 aaPredicted RBP10.25□□□□□ -0.77
TRIM49B-202ENST00000622138 GRIN2BQ13224 1484 aa10.24□□□□□ -0.77
TRIM49B-202ENST00000622138 TDRD9Q8NDG6 1382 aaKnown RBP10.24□□□□□ -0.77
TRIM49B-202ENST00000622138 PPP4R2Q9NY27 417 aa10.24□□□□□ -0.77
TRIM49B-202ENST00000622138 HFM1A2PYH4 1435 aa10.23□□□□□ -0.77
TRIM49B-202ENST00000622138 NCOA2Q15596 1464 aa10.23□□□□□ -0.77
TRIM49B-202ENST00000622138 MTUS2Q5JR59 1369 aa10.23□□□□□ -0.77
TRIM49B-202ENST00000622138 KDM5BQ9UGL1 1544 aa10.23□□□□□ -0.77
TRIM49B-202ENST00000622138 MAGI3Q5TCQ9 1506 aa10.22□□□□□ -0.77
TRIM49B-202ENST00000622138 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
TRIM49B-202ENST00000622138 NAIPQ13075 1403 aa10.21□□□□□ -0.77
TRIM49B-202ENST00000622138 ANP32AP39687 249 aaKnown RBP10.21□□□□□ -0.77
TRIM49B-202ENST00000622138 IPO9Q96P70 1041 aaKnown RBP10.21□□□□□ -0.77
TRIM49B-202ENST00000622138 MYOM3Q5VTT5 1437 aa10.21□□□□□ -0.78
TRIM49B-202ENST00000622138 UACAQ9BZF9 1416 aa10.21□□□□□ -0.78
TRIM49B-202ENST00000622138 GAPVD1Q14C86 1478 aa10.2□□□□□ -0.78
TRIM49B-202ENST00000622138 LAMC3Q9Y6N6 1575 aa10.19□□□□□ -0.78
TRIM49B-202ENST00000622138 TONSLQ96HA7 1378 aa10.19□□□□□ -0.78
TRIM49B-202ENST00000622138 SUPT6HQ7KZ85 1726 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms