RNA–Protein interactions for RNA: ENST00000622062.1

WHAMMP3-204, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3, humanhuman

TSL 1 (best)

Gene WHAMMP3, Length 2,944 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMMP3-204ENST00000622062 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
WHAMMP3-204ENST00000622062 DNAJC5Q9H3Z4 198 aa12.48□□□□□ -0.41
WHAMMP3-204ENST00000622062 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
WHAMMP3-204ENST00000622062 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
WHAMMP3-204ENST00000622062 FHOD3Q2V2M9 1422 aa12.45□□□□□ -0.42
WHAMMP3-204ENST00000622062 LAMC3Q9Y6N6 1575 aa12.44□□□□□ -0.42
WHAMMP3-204ENST00000622062 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
WHAMMP3-204ENST00000622062 NEUROD1Q13562 356 aa12.4□□□□□ -0.42
WHAMMP3-204ENST00000622062 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
WHAMMP3-204ENST00000622062 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
WHAMMP3-204ENST00000622062 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
WHAMMP3-204ENST00000622062 PRDM2Q13029 1718 aa12.38□□□□□ -0.43
WHAMMP3-204ENST00000622062 DNMBPQ6XZF7 1577 aa12.38□□□□□ -0.43
WHAMMP3-204ENST00000622062 MIER1Q8N108 512 aa12.38□□□□□ -0.43
WHAMMP3-204ENST00000622062 DHX57Q6P158 1386 aaKnown RBP12.36□□□□□ -0.43
WHAMMP3-204ENST00000622062 FBLN2P98095 1184 aa12.36□□□□□ -0.43
WHAMMP3-204ENST00000622062 PHLDB1Q86UU1 1377 aa12.36□□□□□ -0.43
WHAMMP3-204ENST00000622062 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
WHAMMP3-204ENST00000622062 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
WHAMMP3-204ENST00000622062 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.43
WHAMMP3-204ENST00000622062 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
WHAMMP3-204ENST00000622062 SIN3AQ96ST3 1273 aa12.33□□□□□ -0.44
WHAMMP3-204ENST00000622062 GAPVD1Q14C86 1478 aa12.33□□□□□ -0.44
WHAMMP3-204ENST00000622062 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
WHAMMP3-204ENST00000622062 FHAD1B1AJZ9 1412 aa12.31□□□□□ -0.44
WHAMMP3-204ENST00000622062 RRBP1Q9P2E9 1410 aaKnown RBP12.31□□□□□ -0.44
WHAMMP3-204ENST00000622062 DAXXQ9UER7 740 aaPredicted RBP12.31□□□□□ -0.44
WHAMMP3-204ENST00000622062 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
WHAMMP3-204ENST00000622062 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
WHAMMP3-204ENST00000622062 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
WHAMMP3-204ENST00000622062 ACIN1Q9UKV3 1341 aaKnown RBP12.29□□□□□ -0.44
WHAMMP3-204ENST00000622062 HIRIP3Q9BW71 556 aaPredicted RBP12.29□□□□□ -0.44
WHAMMP3-204ENST00000622062 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
WHAMMP3-204ENST00000622062 ERCC6Q03468 1493 aa12.28□□□□□ -0.44
WHAMMP3-204ENST00000622062 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
WHAMMP3-204ENST00000622062 TIAM1Q13009 1591 aa12.28□□□□□ -0.44
WHAMMP3-204ENST00000622062 GTF3C3Q9Y5Q9 886 aa12.27□□□□□ -0.45
WHAMMP3-204ENST00000622062 PCF11O94913 1555 aaKnown RBP12.26□□□□□ -0.45
WHAMMP3-204ENST00000622062 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
WHAMMP3-204ENST00000622062 RRP7BPQ9NSQ0 103 aa12.23□□□□□ -0.45
WHAMMP3-204ENST00000622062 SETD5Q9C0A6 1442 aa12.22□□□□□ -0.45
WHAMMP3-204ENST00000622062 FMN1Q68DA7 1419 aa12.21□□□□□ -0.45
WHAMMP3-204ENST00000622062 WDR62O43379 1518 aa12.21□□□□□ -0.46
WHAMMP3-204ENST00000622062 ZNF608Q9ULD9 1512 aaPredicted RBP12.2□□□□□ -0.46
WHAMMP3-204ENST00000622062 CASKIN1Q8WXD9 1431 aa12.2□□□□□ -0.46
WHAMMP3-204ENST00000622062 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
WHAMMP3-204ENST00000622062 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
WHAMMP3-204ENST00000622062 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
WHAMMP3-204ENST00000622062 CUL7Q14999 1698 aa12.17□□□□□ -0.46
WHAMMP3-204ENST00000622062 FYCO1Q9BQS8 1478 aa12.16□□□□□ -0.46
WHAMMP3-204ENST00000622062 MRC2Q9UBG0 1479 aa12.16□□□□□ -0.46
WHAMMP3-204ENST00000622062 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
WHAMMP3-204ENST00000622062 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
WHAMMP3-204ENST00000622062 ZNF777Q9ULD5 760 aaPredicted RBP12.14□□□□□ -0.47
WHAMMP3-204ENST00000622062 EFCAB5A4FU69 1503 aa12.13□□□□□ -0.47
WHAMMP3-204ENST00000622062 FGD6Q6ZV73 1430 aa12.13□□□□□ -0.47
WHAMMP3-204ENST00000622062 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
WHAMMP3-204ENST00000622062 FOXD1Q16676 465 aa12.12□□□□□ -0.47
WHAMMP3-204ENST00000622062 KCNH8Q96L42 1107 aa12.12□□□□□ -0.47
WHAMMP3-204ENST00000622062 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
WHAMMP3-204ENST00000622062 SNAPC4Q5SXM2 1469 aa12.11□□□□□ -0.47
WHAMMP3-204ENST00000622062 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
WHAMMP3-204ENST00000622062 PTPRKQ15262 1439 aa12.11□□□□□ -0.47
WHAMMP3-204ENST00000622062 NCOA2Q15596 1464 aa12.11□□□□□ -0.47
WHAMMP3-204ENST00000622062 ZNF644Q9H582 1327 aaPredicted RBP12.1□□□□□ -0.47
WHAMMP3-204ENST00000622062 WDR97A6NE52 1622 aa12.09□□□□□ -0.47
WHAMMP3-204ENST00000622062 MAPKBP1O60336 1514 aa12.09□□□□□ -0.47
WHAMMP3-204ENST00000622062 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
WHAMMP3-204ENST00000622062 CDK13Q14004 1512 aaKnown RBP12.08□□□□□ -0.47
WHAMMP3-204ENST00000622062 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
WHAMMP3-204ENST00000622062 PRKCSHP14314 528 aaPredicted RBP12.06□□□□□ -0.48
WHAMMP3-204ENST00000622062 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
WHAMMP3-204ENST00000622062 ADRA2BP18089 450 aa12.06□□□□□ -0.48
WHAMMP3-204ENST00000622062 MYOM3Q5VTT5 1437 aa12.06□□□□□ -0.48
WHAMMP3-204ENST00000622062 PPP1R15AO75807 674 aaPredicted RBP12.04□□□□□ -0.48
WHAMMP3-204ENST00000622062 IQGAP2Q13576 1575 aa12.04□□□□□ -0.48
WHAMMP3-204ENST00000622062 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
WHAMMP3-204ENST00000622062 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
WHAMMP3-204ENST00000622062 MAGI3Q5TCQ9 1506 aa12.03□□□□□ -0.48
WHAMMP3-204ENST00000622062 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
WHAMMP3-204ENST00000622062 SAMD9Q5K651 1589 aa12.02□□□□□ -0.48
WHAMMP3-204ENST00000622062 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.49
WHAMMP3-204ENST00000622062 PBRM1Q86U86 1689 aa12.01□□□□□ -0.49
WHAMMP3-204ENST00000622062 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
WHAMMP3-204ENST00000622062 LRRIQ1Q96JM4 1722 aa12.01□□□□□ -0.49
WHAMMP3-204ENST00000622062 CNGB1Q14028 1251 aaPredicted RBP12.01□□□□□ -0.49
WHAMMP3-204ENST00000622062 NAIPQ13075 1403 aa12□□□□□ -0.49
WHAMMP3-204ENST00000622062 CFDP1Q9UEE9 299 aaPredicted RBP12□□□□□ -0.49
WHAMMP3-204ENST00000622062 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
WHAMMP3-204ENST00000622062 MPHOSPH9Q99550 1183 aa11.97□□□□□ -0.49
WHAMMP3-204ENST00000622062 ZNF326Q5BKZ1 582 aaKnown RBP11.97□□□□□ -0.49
WHAMMP3-204ENST00000622062 HFM1A2PYH4 1435 aa11.97□□□□□ -0.49
WHAMMP3-204ENST00000622062 PRG4Q92954 1404 aaPredicted RBP11.97□□□□□ -0.49
WHAMMP3-204ENST00000622062 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
WHAMMP3-204ENST00000622062 PLB1Q6P1J6 1458 aa11.97□□□□□ -0.49
WHAMMP3-204ENST00000622062 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
WHAMMP3-204ENST00000622062 KIAA0586Q9BVV6 1533 aa11.96□□□□□ -0.5
WHAMMP3-204ENST00000622062 EHBP1L1Q8N3D4 1523 aa11.95□□□□□ -0.5
WHAMMP3-204ENST00000622062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.95□□□□□ -0.5
WHAMMP3-204ENST00000622062 EIF4G3O43432 1585 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms