RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 KIF21BO75037 1637 aa15.85■□□□□ 0.13
PCDHGA11-203ENST00000622044 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
PCDHGA11-203ENST00000622044 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
PCDHGA11-203ENST00000622044 ARID3CA6NKF2 412 aa15.82■□□□□ 0.12
PCDHGA11-203ENST00000622044 NBR1Q14596 966 aa15.8■□□□□ 0.12
PCDHGA11-203ENST00000622044 CHIC2Q9UKJ5 165 aa15.79■□□□□ 0.12
PCDHGA11-203ENST00000622044 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
PCDHGA11-203ENST00000622044 ZNF326Q5BKZ1 582 aaKnown RBP15.75■□□□□ 0.11
PCDHGA11-203ENST00000622044 SETD5Q9C0A6 1442 aa15.74■□□□□ 0.11
PCDHGA11-203ENST00000622044 B4GALNT3Q6L9W6 998 aa15.72■□□□□ 0.11
PCDHGA11-203ENST00000622044 ARAP1Q96P48 1450 aa15.72■□□□□ 0.11
PCDHGA11-203ENST00000622044 MRS2Q9HD23 443 aa15.7■□□□□ 0.1
PCDHGA11-203ENST00000622044 RRP7BPQ9NSQ0 103 aa15.7■□□□□ 0.1
PCDHGA11-203ENST00000622044 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
PCDHGA11-203ENST00000622044 CCER2I3L3R5 266 aa15.68■□□□□ 0.1
PCDHGA11-203ENST00000622044 RTL5Q5HYW3 569 aaPredicted RBP15.68■□□□□ 0.1
PCDHGA11-203ENST00000622044 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
PCDHGA11-203ENST00000622044 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
PCDHGA11-203ENST00000622044 NESP48681 1621 aa15.63■□□□□ 0.09
PCDHGA11-203ENST00000622044 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
PCDHGA11-203ENST00000622044 RRBP1Q9P2E9 1410 aaKnown RBP15.62■□□□□ 0.09
PCDHGA11-203ENST00000622044 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
PCDHGA11-203ENST00000622044 CUX2O14529 1486 aa15.62■□□□□ 0.09
PCDHGA11-203ENST00000622044 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
PCDHGA11-203ENST00000622044 WDR97A6NE52 1622 aa15.6■□□□□ 0.09
PCDHGA11-203ENST00000622044 PHLDB1Q86UU1 1377 aa15.59■□□□□ 0.09
PCDHGA11-203ENST00000622044 MSH5O43196 834 aa15.59■□□□□ 0.09
PCDHGA11-203ENST00000622044 CADPSQ9ULU8 1353 aa15.59■□□□□ 0.09
PCDHGA11-203ENST00000622044 EIF4G2P78344 907 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDHGA11-203ENST00000622044 FBLN2P98095 1184 aa15.58■□□□□ 0.08
PCDHGA11-203ENST00000622044 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
PCDHGA11-203ENST00000622044 CARMIL1Q5VZK9 1371 aa15.57■□□□□ 0.08
PCDHGA11-203ENST00000622044 HSPA5P11021 654 aaKnown RBP15.57■□□□□ 0.08
PCDHGA11-203ENST00000622044 ANP32AP39687 249 aaKnown RBP15.57■□□□□ 0.08
PCDHGA11-203ENST00000622044 FOXD1Q16676 465 aa15.57■□□□□ 0.08
PCDHGA11-203ENST00000622044 PPP4R2Q9NY27 417 aa15.57■□□□□ 0.08
PCDHGA11-203ENST00000622044 DEKP35659 375 aaKnown RBP15.55■□□□□ 0.08
PCDHGA11-203ENST00000622044 ARHGAP35Q9NRY4 1499 aa15.55■□□□□ 0.08
PCDHGA11-203ENST00000622044 TIMELESSQ9UNS1 1208 aa15.53■□□□□ 0.08
PCDHGA11-203ENST00000622044 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
PCDHGA11-203ENST00000622044 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
PCDHGA11-203ENST00000622044 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
PCDHGA11-203ENST00000622044 TDRD9Q8NDG6 1382 aaKnown RBP15.5■□□□□ 0.07
PCDHGA11-203ENST00000622044 NOP58Q9Y2X3 529 aaKnown RBP15.48■□□□□ 0.07
PCDHGA11-203ENST00000622044 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
PCDHGA11-203ENST00000622044 CCDC184Q52MB2 194 aa15.48■□□□□ 0.07
PCDHGA11-203ENST00000622044 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
PCDHGA11-203ENST00000622044 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
PCDHGA11-203ENST00000622044 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
PCDHGA11-203ENST00000622044 CFTRP13569 1480 aa15.46■□□□□ 0.06
PCDHGA11-203ENST00000622044 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.06
PCDHGA11-203ENST00000622044 MAPKBP1O60336 1514 aa15.45■□□□□ 0.06
PCDHGA11-203ENST00000622044 CUX1P39880 1505 aa15.45■□□□□ 0.06
PCDHGA11-203ENST00000622044 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
PCDHGA11-203ENST00000622044 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
PCDHGA11-203ENST00000622044 LRRC9Q6ZRR7 1453 aa15.44■□□□□ 0.06
PCDHGA11-203ENST00000622044 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
PCDHGA11-203ENST00000622044 ZNF777Q9ULD5 760 aaPredicted RBP15.43■□□□□ 0.06
PCDHGA11-203ENST00000622044 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
PCDHGA11-203ENST00000622044 IGF1RP08069 1367 aa15.43■□□□□ 0.06
PCDHGA11-203ENST00000622044 TMC1Q8TDI8 760 aa15.43■□□□□ 0.06
PCDHGA11-203ENST00000622044 DAXXQ9UER7 740 aaPredicted RBP15.42■□□□□ 0.06
PCDHGA11-203ENST00000622044 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
PCDHGA11-203ENST00000622044 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
PCDHGA11-203ENST00000622044 LAS1LQ9Y4W2 734 aaKnown RBP15.41■□□□□ 0.06
PCDHGA11-203ENST00000622044 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
PCDHGA11-203ENST00000622044 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
PCDHGA11-203ENST00000622044 CCDC18Q5T9S5 1454 aa15.38■□□□□ 0.05
PCDHGA11-203ENST00000622044 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
PCDHGA11-203ENST00000622044 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
PCDHGA11-203ENST00000622044 PRKRIP1Q9H875 184 aaPredicted RBP15.37■□□□□ 0.05
PCDHGA11-203ENST00000622044 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
PCDHGA11-203ENST00000622044 TIAM1Q13009 1591 aa15.34■□□□□ 0.05
PCDHGA11-203ENST00000622044 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.04
PCDHGA11-203ENST00000622044 FGD6Q6ZV73 1430 aa15.29■□□□□ 0.04
PCDHGA11-203ENST00000622044 FMN1Q68DA7 1419 aa15.29■□□□□ 0.04
PCDHGA11-203ENST00000622044 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
PCDHGA11-203ENST00000622044 C11orf95C9JLR9 678 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA11-203ENST00000622044 NEFMP07197 916 aa15.28■□□□□ 0.04
PCDHGA11-203ENST00000622044 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
PCDHGA11-203ENST00000622044 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
PCDHGA11-203ENST00000622044 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
PCDHGA11-203ENST00000622044 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
PCDHGA11-203ENST00000622044 EIF5BO60841 1220 aaKnown RBP15.25■□□□□ 0.03
PCDHGA11-203ENST00000622044 IPO9Q96P70 1041 aaKnown RBP15.24■□□□□ 0.03
PCDHGA11-203ENST00000622044 AKNAQ7Z591 1439 aa15.24■□□□□ 0.03
PCDHGA11-203ENST00000622044 NUDCQ9Y266 331 aa15.23■□□□□ 0.03
PCDHGA11-203ENST00000622044 KIF7Q2M1P5 1343 aa15.21■□□□□ 0.03
PCDHGA11-203ENST00000622044 CCDC7Q96M83 1385 aa15.21■□□□□ 0.03
PCDHGA11-203ENST00000622044 CARD11Q9BXL7 1154 aa15.21■□□□□ 0.02
PCDHGA11-203ENST00000622044 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCDHGA11-203ENST00000622044 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA11-203ENST00000622044 CNTLNQ9NXG0 1405 aa15.2■□□□□ 0.02
PCDHGA11-203ENST00000622044 PCF11O94913 1555 aaKnown RBP15.2■□□□□ 0.02
PCDHGA11-203ENST00000622044 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA11-203ENST00000622044 TOPBP1Q92547 1522 aa15.2■□□□□ 0.02
PCDHGA11-203ENST00000622044 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA11-203ENST00000622044 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
PCDHGA11-203ENST00000622044 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
PCDHGA11-203ENST00000622044 RGL3Q3MIN7 710 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms