RNA–Protein interactions for RNA: ENST00000621961.1

PCDH7-208, Transcript of protocadherin 7, humanhuman

TSL 5

Gene PCDH7, Length 2,029 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-208ENST00000621961 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
PCDH7-208ENST00000621961 PPP6R1Q9UPN7 881 aa12.61□□□□□ -0.39
PCDH7-208ENST00000621961 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
PCDH7-208ENST00000621961 TRIM52Q96A61 297 aa12.58□□□□□ -0.4
PCDH7-208ENST00000621961 ANP32CO43423 234 aa12.57□□□□□ -0.4
PCDH7-208ENST00000621961 NOP58Q9Y2X3 529 aaKnown RBP12.54□□□□□ -0.4
PCDH7-208ENST00000621961 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
PCDH7-208ENST00000621961 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
PCDH7-208ENST00000621961 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
PCDH7-208ENST00000621961 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.4
PCDH7-208ENST00000621961 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
PCDH7-208ENST00000621961 RAPGEF2Q9Y4G8 1499 aa12.5□□□□□ -0.41
PCDH7-208ENST00000621961 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
PCDH7-208ENST00000621961 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
PCDH7-208ENST00000621961 KANK4Q5T7N3 995 aaPredicted RBP12.47□□□□□ -0.41
PCDH7-208ENST00000621961 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
PCDH7-208ENST00000621961 ARAP1Q96P48 1450 aa12.45□□□□□ -0.42
PCDH7-208ENST00000621961 NBR1Q14596 966 aa12.44□□□□□ -0.42
PCDH7-208ENST00000621961 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
PCDH7-208ENST00000621961 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
PCDH7-208ENST00000621961 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
PCDH7-208ENST00000621961 IRX6P78412 446 aaPredicted RBP12.42□□□□□ -0.42
PCDH7-208ENST00000621961 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
PCDH7-208ENST00000621961 ATAD2BQ9ULI0 1458 aa12.41□□□□□ -0.42
PCDH7-208ENST00000621961 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
PCDH7-208ENST00000621961 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
PCDH7-208ENST00000621961 IPO9Q96P70 1041 aaKnown RBP12.4□□□□□ -0.42
PCDH7-208ENST00000621961 WASHC2AQ641Q2 1341 aa12.38□□□□□ -0.43
PCDH7-208ENST00000621961 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
PCDH7-208ENST00000621961 SIN3AQ96ST3 1273 aa12.37□□□□□ -0.43
PCDH7-208ENST00000621961 ERCC6Q03468 1493 aa12.37□□□□□ -0.43
PCDH7-208ENST00000621961 C11orf95C9JLR9 678 aaPredicted RBP12.36□□□□□ -0.43
PCDH7-208ENST00000621961 ANP32AP39687 249 aaKnown RBP12.36□□□□□ -0.43
PCDH7-208ENST00000621961 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
PCDH7-208ENST00000621961 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
PCDH7-208ENST00000621961 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
PCDH7-208ENST00000621961 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
PCDH7-208ENST00000621961 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
PCDH7-208ENST00000621961 USP35Q9P2H5 1018 aa12.33□□□□□ -0.44
PCDH7-208ENST00000621961 WASHC2CQ9Y4E1 1318 aa12.31□□□□□ -0.44
PCDH7-208ENST00000621961 HIRIP3Q9BW71 556 aaPredicted RBP12.31□□□□□ -0.44
PCDH7-208ENST00000621961 MAP3K1Q13233 1512 aa12.31□□□□□ -0.44
PCDH7-208ENST00000621961 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
PCDH7-208ENST00000621961 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
PCDH7-208ENST00000621961 KCNA4P22459 653 aa12.28□□□□□ -0.44
PCDH7-208ENST00000621961 NCAPD3P42695 1498 aa12.27□□□□□ -0.44
PCDH7-208ENST00000621961 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.44
PCDH7-208ENST00000621961 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
PCDH7-208ENST00000621961 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
PCDH7-208ENST00000621961 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
PCDH7-208ENST00000621961 FHAD1B1AJZ9 1412 aa12.26□□□□□ -0.45
PCDH7-208ENST00000621961 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
PCDH7-208ENST00000621961 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
PCDH7-208ENST00000621961 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
PCDH7-208ENST00000621961 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
PCDH7-208ENST00000621961 RNF123Q5XPI4 1314 aa12.21□□□□□ -0.45
PCDH7-208ENST00000621961 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
PCDH7-208ENST00000621961 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
PCDH7-208ENST00000621961 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
PCDH7-208ENST00000621961 NEFMP07197 916 aa12.19□□□□□ -0.46
PCDH7-208ENST00000621961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDH7-208ENST00000621961 LRRC9Q6ZRR7 1453 aa12.18□□□□□ -0.46
PCDH7-208ENST00000621961 CNTLNQ9NXG0 1405 aa12.17□□□□□ -0.46
PCDH7-208ENST00000621961 PHLDB1Q86UU1 1377 aa12.17□□□□□ -0.46
PCDH7-208ENST00000621961 NESP48681 1621 aa12.16□□□□□ -0.46
PCDH7-208ENST00000621961 CCDC184Q52MB2 194 aa12.15□□□□□ -0.46
PCDH7-208ENST00000621961 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
PCDH7-208ENST00000621961 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.47
PCDH7-208ENST00000621961 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
PCDH7-208ENST00000621961 KDM5BQ9UGL1 1544 aa12.14□□□□□ -0.47
PCDH7-208ENST00000621961 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
PCDH7-208ENST00000621961 GSE1Q14687 1217 aa12.13□□□□□ -0.47
PCDH7-208ENST00000621961 FAM9BQ8IZU0 186 aa12.13□□□□□ -0.47
PCDH7-208ENST00000621961 MRS2Q9HD23 443 aa12.12□□□□□ -0.47
PCDH7-208ENST00000621961 BRPF3Q9ULD4 1205 aa12.12□□□□□ -0.47
PCDH7-208ENST00000621961 NUDCQ9Y266 331 aa12.12□□□□□ -0.47
PCDH7-208ENST00000621961 CUX1P39880 1505 aa12.12□□□□□ -0.47
PCDH7-208ENST00000621961 EIF5BO60841 1220 aaKnown RBP12.11□□□□□ -0.47
PCDH7-208ENST00000621961 HSPA5P11021 654 aaKnown RBP12.11□□□□□ -0.47
PCDH7-208ENST00000621961 UACAQ9BZF9 1416 aa12.11□□□□□ -0.47
PCDH7-208ENST00000621961 LAS1LQ9Y4W2 734 aaKnown RBP12.11□□□□□ -0.47
PCDH7-208ENST00000621961 KIF27Q86VH2 1401 aa12.1□□□□□ -0.47
PCDH7-208ENST00000621961 MS4A1P11836 297 aa12.1□□□□□ -0.47
PCDH7-208ENST00000621961 PKNOX2Q96KN3 472 aa12.1□□□□□ -0.47
PCDH7-208ENST00000621961 AKNAQ7Z591 1439 aa12.09□□□□□ -0.47
PCDH7-208ENST00000621961 CFTRP13569 1480 aa12.09□□□□□ -0.47
PCDH7-208ENST00000621961 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
PCDH7-208ENST00000621961 CFAP43Q8NDM7 1665 aa12.08□□□□□ -0.48
PCDH7-208ENST00000621961 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
PCDH7-208ENST00000621961 FAM43AQ8N2R8 423 aa12.08□□□□□ -0.48
PCDH7-208ENST00000621961 PDE4AP27815 886 aa12.07□□□□□ -0.48
PCDH7-208ENST00000621961 DDRGK1Q96HY6 314 aa12.07□□□□□ -0.48
PCDH7-208ENST00000621961 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
PCDH7-208ENST00000621961 NCOA1Q15788 1441 aa12.07□□□□□ -0.48
PCDH7-208ENST00000621961 CCDC18Q5T9S5 1454 aa12.07□□□□□ -0.48
PCDH7-208ENST00000621961 CCDC7Q96M83 1385 aa12.06□□□□□ -0.48
PCDH7-208ENST00000621961 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
PCDH7-208ENST00000621961 HFM1A2PYH4 1435 aa12.05□□□□□ -0.48
PCDH7-208ENST00000621961 GLIPR1L2Q4G1C9 344 aa12.03□□□□□ -0.48
PCDH7-208ENST00000621961 FRAT1Q92837 279 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms