RNA–Protein interactions for RNA: ENST00000621961.1

PCDH7-208, Transcript of protocadherin 7, humanhuman

TSL 5

Gene PCDH7, Length 2,029 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-208ENST00000621961 NISCHQ9Y2I1 1504 aa16.77■□□□□ 0.27
PCDH7-208ENST00000621961 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
PCDH7-208ENST00000621961 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
PCDH7-208ENST00000621961 HRCP23327 699 aa15.36■□□□□ 0.05
PCDH7-208ENST00000621961 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
PCDH7-208ENST00000621961 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
PCDH7-208ENST00000621961 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
PCDH7-208ENST00000621961 MYT1Q01538 1121 aa14.78□□□□□ -0.04
PCDH7-208ENST00000621961 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
PCDH7-208ENST00000621961 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
PCDH7-208ENST00000621961 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
PCDH7-208ENST00000621961 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
PCDH7-208ENST00000621961 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
PCDH7-208ENST00000621961 ZEB1P37275 1124 aaPredicted RBP14.48□□□□□ -0.09
PCDH7-208ENST00000621961 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
PCDH7-208ENST00000621961 CCDC180Q9P1Z9 1646 aa14.45□□□□□ -0.1
PCDH7-208ENST00000621961 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
PCDH7-208ENST00000621961 ABCC9O60706 1549 aa14.29□□□□□ -0.12
PCDH7-208ENST00000621961 ACIN1Q9UKV3 1341 aaKnown RBP14.21□□□□□ -0.13
PCDH7-208ENST00000621961 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.14
PCDH7-208ENST00000621961 LOC105371045A0A1W2PR82 267 aa14.17□□□□□ -0.14
PCDH7-208ENST00000621961 NEUROD1Q13562 356 aa14.08□□□□□ -0.15
PCDH7-208ENST00000621961 CENPBP07199 599 aaPredicted RBP14.03□□□□□ -0.16
PCDH7-208ENST00000621961 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.16
PCDH7-208ENST00000621961 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
PCDH7-208ENST00000621961 DIEXFQ68CQ4 756 aaKnown RBP13.83□□□□□ -0.2
PCDH7-208ENST00000621961 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
PCDH7-208ENST00000621961 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
PCDH7-208ENST00000621961 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
PCDH7-208ENST00000621961 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
PCDH7-208ENST00000621961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
PCDH7-208ENST00000621961 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
PCDH7-208ENST00000621961 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
PCDH7-208ENST00000621961 BCL11AQ9H165 835 aa13.56□□□□□ -0.24
PCDH7-208ENST00000621961 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
PCDH7-208ENST00000621961 ANP32EQ9BTT0 268 aa13.52□□□□□ -0.25
PCDH7-208ENST00000621961 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
PCDH7-208ENST00000621961 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.25
PCDH7-208ENST00000621961 PLPPR3Q6T4P5 718 aa13.44□□□□□ -0.26
PCDH7-208ENST00000621961 RB1CC1Q8TDY2 1594 aa13.43□□□□□ -0.26
PCDH7-208ENST00000621961 MIER1Q8N108 512 aa13.42□□□□□ -0.26
PCDH7-208ENST00000621961 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
PCDH7-208ENST00000621961 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
PCDH7-208ENST00000621961 SCRIBQ14160 1630 aa13.36□□□□□ -0.27
PCDH7-208ENST00000621961 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
PCDH7-208ENST00000621961 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
PCDH7-208ENST00000621961 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
PCDH7-208ENST00000621961 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
PCDH7-208ENST00000621961 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
PCDH7-208ENST00000621961 NACADO15069 1562 aa13.25□□□□□ -0.29
PCDH7-208ENST00000621961 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
PCDH7-208ENST00000621961 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
PCDH7-208ENST00000621961 PRKCSHP14314 528 aaPredicted RBP13.11□□□□□ -0.31
PCDH7-208ENST00000621961 TNIKQ9UKE5 1360 aa13.1□□□□□ -0.31
PCDH7-208ENST00000621961 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
PCDH7-208ENST00000621961 RBM19Q9Y4C8 960 aaKnown RBP13.01□□□□□ -0.33
PCDH7-208ENST00000621961 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
PCDH7-208ENST00000621961 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
PCDH7-208ENST00000621961 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
PCDH7-208ENST00000621961 CECR2Q9BXF3 1484 aa13□□□□□ -0.33
PCDH7-208ENST00000621961 WIZO95785 1651 aa12.97□□□□□ -0.33
PCDH7-208ENST00000621961 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
PCDH7-208ENST00000621961 MYT1LQ9UL68 1186 aa12.96□□□□□ -0.34
PCDH7-208ENST00000621961 EEA1Q15075 1411 aa12.96□□□□□ -0.34
PCDH7-208ENST00000621961 BAZ1AQ9NRL2 1556 aaPredicted RBP12.95□□□□□ -0.34
PCDH7-208ENST00000621961 FKBP8Q14318 412 aa12.91□□□□□ -0.34
PCDH7-208ENST00000621961 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.34
PCDH7-208ENST00000621961 MSH5O43196 834 aa12.89□□□□□ -0.35
PCDH7-208ENST00000621961 BCANQ96GW7 911 aa12.89□□□□□ -0.35
PCDH7-208ENST00000621961 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
PCDH7-208ENST00000621961 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
PCDH7-208ENST00000621961 GOLGA3Q08378 1498 aa12.87□□□□□ -0.35
PCDH7-208ENST00000621961 DNAJC5Q9H3Z4 198 aa12.86□□□□□ -0.35
PCDH7-208ENST00000621961 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
PCDH7-208ENST00000621961 NEFLP07196 543 aa12.86□□□□□ -0.35
PCDH7-208ENST00000621961 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
PCDH7-208ENST00000621961 SOGA1O94964 1423 aa12.84□□□□□ -0.35
PCDH7-208ENST00000621961 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
PCDH7-208ENST00000621961 SMARCA4P51532 1647 aa12.81□□□□□ -0.36
PCDH7-208ENST00000621961 APLP2Q06481 763 aa12.81□□□□□ -0.36
PCDH7-208ENST00000621961 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
PCDH7-208ENST00000621961 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
PCDH7-208ENST00000621961 KCNH8Q96L42 1107 aa12.78□□□□□ -0.36
PCDH7-208ENST00000621961 CLIP1P30622 1438 aa12.75□□□□□ -0.37
PCDH7-208ENST00000621961 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
PCDH7-208ENST00000621961 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
PCDH7-208ENST00000621961 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
PCDH7-208ENST00000621961 ERICH6BQ5W0A0 696 aa12.72□□□□□ -0.37
PCDH7-208ENST00000621961 KIF21BO75037 1637 aa12.72□□□□□ -0.37
PCDH7-208ENST00000621961 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
PCDH7-208ENST00000621961 ITGAEP38570 1179 aa12.71□□□□□ -0.37
PCDH7-208ENST00000621961 CDK11AQ9UQ88 783 aaPredicted RBP12.71□□□□□ -0.37
PCDH7-208ENST00000621961 SMARCA2P51531 1590 aa12.71□□□□□ -0.37
PCDH7-208ENST00000621961 CUX2O14529 1486 aa12.7□□□□□ -0.38
PCDH7-208ENST00000621961 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
PCDH7-208ENST00000621961 ADRA2BP18089 450 aa12.67□□□□□ -0.38
PCDH7-208ENST00000621961 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
PCDH7-208ENST00000621961 PPP1R15AO75807 674 aaPredicted RBP12.63□□□□□ -0.39
PCDH7-208ENST00000621961 FOXD1Q16676 465 aa12.63□□□□□ -0.39
PCDH7-208ENST00000621961 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms