RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CEP170Q5SW79 1584 aa4.49□□□□□ -1.69
CPNE3-211ENST00000621526 FHAD1B1AJZ9 1412 aa4.49□□□□□ -1.69
CPNE3-211ENST00000621526 COL17A1Q9UMD9 1497 aaPredicted RBP4.49□□□□□ -1.69
CPNE3-211ENST00000621526 DMRT2Q9Y5R5 561 aa4.47□□□□□ -1.69
CPNE3-211ENST00000621526 PLB1Q6P1J6 1458 aa4.47□□□□□ -1.69
CPNE3-211ENST00000621526 PTPRGP23470 1445 aa4.46□□□□□ -1.69
CPNE3-211ENST00000621526 ABCA10Q8WWZ4 1543 aa4.46□□□□□ -1.69
CPNE3-211ENST00000621526 KIF13AQ9H1H9 1805 aa4.46□□□□□ -1.69
CPNE3-211ENST00000621526 DIP2BQ9P265 1576 aa4.46□□□□□ -1.7
CPNE3-211ENST00000621526 TOP2BQ02880 1626 aa4.44□□□□□ -1.7
CPNE3-211ENST00000621526 SHROOM2Q13796 1616 aa4.44□□□□□ -1.7
CPNE3-211ENST00000621526 WRNQ14191 1432 aaPredicted RBP eCLIP4.44□□□□□ -1.7
CPNE3-211ENST00000621526 ASXL2Q76L83 1435 aa4.43□□□□□ -1.7
CPNE3-211ENST00000621526 GLI2P10070 1586 aa4.43□□□□□ -1.7
CPNE3-211ENST00000621526 TEX14Q8IWB6 1497 aa4.43□□□□□ -1.7
CPNE3-211ENST00000621526 CUX1P39880 1505 aa4.42□□□□□ -1.7
CPNE3-211ENST00000621526 PHLDB1Q86UU1 1377 aa4.41□□□□□ -1.7
CPNE3-211ENST00000621526 TNIKQ9UKE5 1360 aa4.41□□□□□ -1.7
CPNE3-211ENST00000621526 HSPA2P54652 639 aa4.41□□□□□ -1.7
CPNE3-211ENST00000621526 PTPRMP28827 1452 aa4.41□□□□□ -1.7
CPNE3-211ENST00000621526 ABCC2Q92887 1545 aa4.41□□□□□ -1.7
CPNE3-211ENST00000621526 KIAA0586Q9BVV6 1533 aa4.41□□□□□ -1.7
CPNE3-211ENST00000621526 PRDM2Q13029 1718 aa4.41□□□□□ -1.7
CPNE3-211ENST00000621526 UHRF1BP1LA0JNW5 1464 aa4.4□□□□□ -1.71
CPNE3-211ENST00000621526 EPRSP07814 1512 aaKnown RBP4.39□□□□□ -1.71
CPNE3-211ENST00000621526 ERICH3Q5RHP9 1530 aa4.39□□□□□ -1.71
CPNE3-211ENST00000621526 ADCY10Q96PN6 1610 aa4.39□□□□□ -1.71
CPNE3-211ENST00000621526 CARMIL2Q6F5E8 1435 aa4.38□□□□□ -1.71
CPNE3-211ENST00000621526 CD109Q6YHK3 1445 aa4.38□□□□□ -1.71
CPNE3-211ENST00000621526 UACAQ9BZF9 1416 aa4.38□□□□□ -1.71
CPNE3-211ENST00000621526 KCNH8Q96L42 1107 aa4.38□□□□□ -1.71
CPNE3-211ENST00000621526 ARID4BQ4LE39 1312 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-211ENST00000621526 IGF1RP08069 1367 aa4.38□□□□□ -1.71
CPNE3-211ENST00000621526 MAGI3Q5TCQ9 1506 aa4.37□□□□□ -1.71
CPNE3-211ENST00000621526 ABCA5Q8WWZ7 1642 aa4.37□□□□□ -1.71
CPNE3-211ENST00000621526 TTBK1Q5TCY1 1321 aaPredicted RBP4.37□□□□□ -1.71
CPNE3-211ENST00000621526 YEATS2Q9ULM3 1422 aa4.37□□□□□ -1.71
CPNE3-211ENST00000621526 KDM5BQ9UGL1 1544 aa4.36□□□□□ -1.71
CPNE3-211ENST00000621526 ARAP3Q8WWN8 1544 aa4.36□□□□□ -1.71
CPNE3-211ENST00000621526 PCF11O94913 1555 aaKnown RBP4.36□□□□□ -1.71
CPNE3-211ENST00000621526 ADAMTS12P58397 1594 aa4.36□□□□□ -1.71
CPNE3-211ENST00000621526 RAPGEF3O95398 923 aa4.35□□□□□ -1.71
CPNE3-211ENST00000621526 FAM9AQ8IZU1 332 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-211ENST00000621526 TSPOAP1O95153 1857 aa4.34□□□□□ -1.71
CPNE3-211ENST00000621526 PBRM1Q86U86 1689 aa4.33□□□□□ -1.72
CPNE3-211ENST00000621526 PTPRTO14522 1441 aa4.33□□□□□ -1.72
CPNE3-211ENST00000621526 PPRC1Q5VV67 1664 aaKnown RBP4.32□□□□□ -1.72
CPNE3-211ENST00000621526 IQSEC2Q5JU85 1478 aa4.32□□□□□ -1.72
CPNE3-211ENST00000621526 UBAP1LF5GYI3 381 aa4.32□□□□□ -1.72
CPNE3-211ENST00000621526 SPATA31D1Q6ZQQ2 1576 aa4.31□□□□□ -1.72
CPNE3-211ENST00000621526 WDR7Q9Y4E6 1490 aa4.31□□□□□ -1.72
CPNE3-211ENST00000621526 POGZQ7Z3K3 1410 aa4.31□□□□□ -1.72
CPNE3-211ENST00000621526 CARMIL1Q5VZK9 1371 aa4.31□□□□□ -1.72
CPNE3-211ENST00000621526 ADAMTSL3P82987 1691 aa4.31□□□□□ -1.72
CPNE3-211ENST00000621526 MAP3K4Q9Y6R4 1608 aa4.31□□□□□ -1.72
CPNE3-211ENST00000621526 TOM1O60784 492 aa4.3□□□□□ -1.72
CPNE3-211ENST00000621526 HSPA1LP34931 641 aa4.29□□□□□ -1.72
CPNE3-211ENST00000621526 CEBPAP49715 358 aaPredicted RBP4.29□□□□□ -1.72
CPNE3-211ENST00000621526 PLPPR3Q6T4P5 718 aa4.29□□□□□ -1.72
CPNE3-211ENST00000621526 RUSC2Q8N2Y8 1516 aa4.29□□□□□ -1.72
CPNE3-211ENST00000621526 PHF23Q9BUL5 403 aaPredicted RBP4.28□□□□□ -1.72
CPNE3-211ENST00000621526 NEO1Q92859 1461 aa4.28□□□□□ -1.72
CPNE3-211ENST00000621526 KIF27Q86VH2 1401 aa4.28□□□□□ -1.72
CPNE3-211ENST00000621526 DISP1Q96F81 1524 aa4.27□□□□□ -1.73
CPNE3-211ENST00000621526 PKD2Q13563 968 aa4.27□□□□□ -1.73
CPNE3-211ENST00000621526 MLECQ14165 292 aa4.27□□□□□ -1.73
CPNE3-211ENST00000621526 FHOD3Q2V2M9 1422 aa4.26□□□□□ -1.73
CPNE3-211ENST00000621526 AKNAQ7Z591 1439 aa4.26□□□□□ -1.73
CPNE3-211ENST00000621526 MAGI2Q86UL8 1455 aa4.25□□□□□ -1.73
CPNE3-211ENST00000621526 LTBP4Q8N2S1 1624 aa4.25□□□□□ -1.73
CPNE3-211ENST00000621526 PLEKHD1A6NEE1 506 aa4.25□□□□□ -1.73
CPNE3-211ENST00000621526 RGS17Q9UGC6 210 aaPredicted RBP4.25□□□□□ -1.73
CPNE3-211ENST00000621526 DENND4BO75064 1496 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-211ENST00000621526 UHRF1BP1Q6BDS2 1440 aa4.24□□□□□ -1.73
CPNE3-211ENST00000621526 TRAPPC8Q9Y2L5 1435 aa4.24□□□□□ -1.73
CPNE3-211ENST00000621526 FANCAO15360 1455 aa4.24□□□□□ -1.73
CPNE3-211ENST00000621526 BCORL1Q5H9F3 1711 aa4.24□□□□□ -1.73
CPNE3-211ENST00000621526 ZNF335Q9H4Z2 1342 aaPredicted RBP4.23□□□□□ -1.73
CPNE3-211ENST00000621526 PIP4K2BP78356 416 aa4.23□□□□□ -1.73
CPNE3-211ENST00000621526 ESF1Q9H501 851 aaKnown RBP4.23□□□□□ -1.73
CPNE3-211ENST00000621526 KIF21BO75037 1637 aa4.23□□□□□ -1.73
CPNE3-211ENST00000621526 ATP10BO94823 1461 aa4.23□□□□□ -1.73
CPNE3-211ENST00000621526 UGGT2Q9NYU1 1516 aa4.22□□□□□ -1.73
CPNE3-211ENST00000621526 MADDQ8WXG6 1647 aa4.22□□□□□ -1.73
CPNE3-211ENST00000621526 CFAP43Q8NDM7 1665 aa4.22□□□□□ -1.73
CPNE3-211ENST00000621526 NCKAP5LQ9HCH0 1330 aa4.21□□□□□ -1.73
CPNE3-211ENST00000621526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.21□□□□□ -1.74
CPNE3-211ENST00000621526 HNRNPUL2Q1KMD3 747 aaKnown RBP4.21□□□□□ -1.74
CPNE3-211ENST00000621526 ATP10AO60312 1499 aa4.21□□□□□ -1.74
CPNE3-211ENST00000621526 ZCCHC11Q5TAX3 1644 aaKnown RBP4.21□□□□□ -1.74
CPNE3-211ENST00000621526 BIVM-ERCC5R4GMW8 1640 aa4.21□□□□□ -1.74
CPNE3-211ENST00000621526 NCOA1Q15788 1441 aa4.21□□□□□ -1.74
CPNE3-211ENST00000621526 SCAF1Q9H7N4 1312 aaKnown RBP4.21□□□□□ -1.74
CPNE3-211ENST00000621526 CUL7Q14999 1698 aa4.2□□□□□ -1.74
CPNE3-211ENST00000621526 IQGAP2Q13576 1575 aa4.2□□□□□ -1.74
CPNE3-211ENST00000621526 GOLGA3Q08378 1498 aa4.2□□□□□ -1.74
CPNE3-211ENST00000621526 EFCAB2Q5VUJ9 269 aa4.2□□□□□ -1.74
CPNE3-211ENST00000621526 POTEAQ6S8J7 498 aa4.2□□□□□ -1.74
CPNE3-211ENST00000621526 PPP6R1Q9UPN7 881 aa4.2□□□□□ -1.74
CPNE3-211ENST00000621526 PTPRKQ15262 1439 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms