RNA–Protein interactions for RNA: ENST00000621128.4

NCAM1-228, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 4,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-228ENST00000621128 BCANQ96GW7 911 aa12.72□□□□□ -0.37
NCAM1-228ENST00000621128 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.37
NCAM1-228ENST00000621128 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
NCAM1-228ENST00000621128 FMN1Q68DA7 1419 aa12.7□□□□□ -0.38
NCAM1-228ENST00000621128 KANK4Q5T7N3 995 aaPredicted RBP12.69□□□□□ -0.38
NCAM1-228ENST00000621128 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
NCAM1-228ENST00000621128 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
NCAM1-228ENST00000621128 CFDP1Q9UEE9 299 aaPredicted RBP12.67□□□□□ -0.38
NCAM1-228ENST00000621128 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
NCAM1-228ENST00000621128 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
NCAM1-228ENST00000621128 ERCC6Q03468 1493 aa12.66□□□□□ -0.38
NCAM1-228ENST00000621128 HNRNPUQ00839 825 aaKnown RBP eCLIP12.65□□□□□ -0.38
NCAM1-228ENST00000621128 EIF4G1Q04637 1599 aaKnown RBP12.62□□□□□ -0.39
NCAM1-228ENST00000621128 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
NCAM1-228ENST00000621128 FKBP8Q14318 412 aa12.62□□□□□ -0.39
NCAM1-228ENST00000621128 FANCD2Q9BXW9 1451 aa12.61□□□□□ -0.39
NCAM1-228ENST00000621128 SIN3AQ96ST3 1273 aa12.6□□□□□ -0.39
NCAM1-228ENST00000621128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.39
NCAM1-228ENST00000621128 KIF21BO75037 1637 aa12.58□□□□□ -0.4
NCAM1-228ENST00000621128 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
NCAM1-228ENST00000621128 MRS2Q9HD23 443 aa12.58□□□□□ -0.4
NCAM1-228ENST00000621128 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
NCAM1-228ENST00000621128 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
NCAM1-228ENST00000621128 TMC1Q8TDI8 760 aa12.56□□□□□ -0.4
NCAM1-228ENST00000621128 IGF1RP08069 1367 aa12.56□□□□□ -0.4
NCAM1-228ENST00000621128 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
NCAM1-228ENST00000621128 CFTRP13569 1480 aa12.55□□□□□ -0.4
NCAM1-228ENST00000621128 KDM2AQ9Y2K7 1162 aa12.55□□□□□ -0.4
NCAM1-228ENST00000621128 CARMIL2Q6F5E8 1435 aa12.55□□□□□ -0.4
NCAM1-228ENST00000621128 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
NCAM1-228ENST00000621128 ERICH3Q5RHP9 1530 aa12.54□□□□□ -0.4
NCAM1-228ENST00000621128 FHOD3Q2V2M9 1422 aa12.54□□□□□ -0.4
NCAM1-228ENST00000621128 FGD5Q6ZNL6 1462 aa12.54□□□□□ -0.4
NCAM1-228ENST00000621128 SYNJ1O43426 1573 aa12.52□□□□□ -0.41
NCAM1-228ENST00000621128 NEFMP07197 916 aa12.5□□□□□ -0.41
NCAM1-228ENST00000621128 KCNH8Q96L42 1107 aa12.5□□□□□ -0.41
NCAM1-228ENST00000621128 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
NCAM1-228ENST00000621128 DHX57Q6P158 1386 aaKnown RBP12.49□□□□□ -0.41
NCAM1-228ENST00000621128 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
NCAM1-228ENST00000621128 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
NCAM1-228ENST00000621128 CCER2I3L3R5 266 aa12.47□□□□□ -0.41
NCAM1-228ENST00000621128 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
NCAM1-228ENST00000621128 PRXQ9BXM0 1461 aa12.46□□□□□ -0.41
NCAM1-228ENST00000621128 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
NCAM1-228ENST00000621128 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
NCAM1-228ENST00000621128 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
NCAM1-228ENST00000621128 PPP1R15AO75807 674 aaPredicted RBP12.45□□□□□ -0.42
NCAM1-228ENST00000621128 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
NCAM1-228ENST00000621128 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
NCAM1-228ENST00000621128 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
NCAM1-228ENST00000621128 GAPVD1Q14C86 1478 aa12.44□□□□□ -0.42
NCAM1-228ENST00000621128 WDR43Q15061 677 aaKnown RBP eCLIP12.42□□□□□ -0.42
NCAM1-228ENST00000621128 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
NCAM1-228ENST00000621128 MPHOSPH9Q99550 1183 aa12.41□□□□□ -0.42
NCAM1-228ENST00000621128 RGL3Q3MIN7 710 aa12.41□□□□□ -0.42
NCAM1-228ENST00000621128 ANKRD30AQ9BXX3 1397 aa12.4□□□□□ -0.42
NCAM1-228ENST00000621128 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.4□□□□□ -0.42
NCAM1-228ENST00000621128 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.42
NCAM1-228ENST00000621128 CCDC136Q96JN2 1154 aa12.4□□□□□ -0.42
NCAM1-228ENST00000621128 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
NCAM1-228ENST00000621128 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
NCAM1-228ENST00000621128 CUX1P39880 1505 aa12.38□□□□□ -0.43
NCAM1-228ENST00000621128 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
NCAM1-228ENST00000621128 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
NCAM1-228ENST00000621128 HSPA5P11021 654 aaKnown RBP12.37□□□□□ -0.43
NCAM1-228ENST00000621128 LRRC9Q6ZRR7 1453 aa12.37□□□□□ -0.43
NCAM1-228ENST00000621128 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
NCAM1-228ENST00000621128 CASKIN1Q8WXD9 1431 aa12.36□□□□□ -0.43
NCAM1-228ENST00000621128 PKD2Q13563 968 aa12.36□□□□□ -0.43
NCAM1-228ENST00000621128 RRBP1Q9P2E9 1410 aaKnown RBP12.35□□□□□ -0.43
NCAM1-228ENST00000621128 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
NCAM1-228ENST00000621128 KNSTRNQ9Y448 316 aa12.33□□□□□ -0.44
NCAM1-228ENST00000621128 FGD6Q6ZV73 1430 aa12.33□□□□□ -0.44
NCAM1-228ENST00000621128 DCAF11Q8TEB1 546 aa12.33□□□□□ -0.44
NCAM1-228ENST00000621128 EFCAB5A4FU69 1503 aa12.33□□□□□ -0.44
NCAM1-228ENST00000621128 KANK1Q14678 1352 aa12.32□□□□□ -0.44
NCAM1-228ENST00000621128 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
NCAM1-228ENST00000621128 NUP155O75694 1391 aa12.32□□□□□ -0.44
NCAM1-228ENST00000621128 EFCAB2Q5VUJ9 269 aa12.32□□□□□ -0.44
NCAM1-228ENST00000621128 MYOM3Q5VTT5 1437 aa12.31□□□□□ -0.44
NCAM1-228ENST00000621128 PHLDB1Q86UU1 1377 aa12.31□□□□□ -0.44
NCAM1-228ENST00000621128 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
NCAM1-228ENST00000621128 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
NCAM1-228ENST00000621128 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
NCAM1-228ENST00000621128 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
NCAM1-228ENST00000621128 TMF1P82094 1093 aa12.29□□□□□ -0.44
NCAM1-228ENST00000621128 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
NCAM1-228ENST00000621128 FOXD1Q16676 465 aa12.28□□□□□ -0.44
NCAM1-228ENST00000621128 DNMBPQ6XZF7 1577 aa12.28□□□□□ -0.44
NCAM1-228ENST00000621128 POLA1P09884 1462 aaPredicted RBP12.28□□□□□ -0.44
NCAM1-228ENST00000621128 GRIN2BQ13224 1484 aa12.27□□□□□ -0.44
NCAM1-228ENST00000621128 PPP4R2Q9NY27 417 aa12.27□□□□□ -0.44
NCAM1-228ENST00000621128 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.44
NCAM1-228ENST00000621128 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
NCAM1-228ENST00000621128 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
NCAM1-228ENST00000621128 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
NCAM1-228ENST00000621128 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
NCAM1-228ENST00000621128 PTPRGP23470 1445 aa12.24□□□□□ -0.45
NCAM1-228ENST00000621128 ABCA10Q8WWZ4 1543 aa12.23□□□□□ -0.45
NCAM1-228ENST00000621128 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms