RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
GDNF-208ENST00000620847 FHAD1B1AJZ9 1412 aa11.82□□□□□ -0.52
GDNF-208ENST00000620847 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
GDNF-208ENST00000620847 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
GDNF-208ENST00000620847 CUL7Q14999 1698 aa11.8□□□□□ -0.52
GDNF-208ENST00000620847 POLA1P09884 1462 aaPredicted RBP11.8□□□□□ -0.52
GDNF-208ENST00000620847 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
GDNF-208ENST00000620847 RAB3GAP2Q9H2M9 1393 aa11.8□□□□□ -0.52
GDNF-208ENST00000620847 MAPKBP1O60336 1514 aa11.79□□□□□ -0.52
GDNF-208ENST00000620847 CTTNBP2Q8WZ74 1663 aa11.79□□□□□ -0.52
GDNF-208ENST00000620847 EFCAB5A4FU69 1503 aa11.79□□□□□ -0.52
GDNF-208ENST00000620847 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
GDNF-208ENST00000620847 WDR97A6NE52 1622 aa11.77□□□□□ -0.52
GDNF-208ENST00000620847 ITGAEP38570 1179 aa11.77□□□□□ -0.52
GDNF-208ENST00000620847 FYCO1Q9BQS8 1478 aa11.77□□□□□ -0.53
GDNF-208ENST00000620847 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
GDNF-208ENST00000620847 NESP48681 1621 aa11.76□□□□□ -0.53
GDNF-208ENST00000620847 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
GDNF-208ENST00000620847 FHOD3Q2V2M9 1422 aa11.74□□□□□ -0.53
GDNF-208ENST00000620847 CASKIN1Q8WXD9 1431 aa11.74□□□□□ -0.53
GDNF-208ENST00000620847 LAMC3Q9Y6N6 1575 aa11.73□□□□□ -0.53
GDNF-208ENST00000620847 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
GDNF-208ENST00000620847 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
GDNF-208ENST00000620847 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.53
GDNF-208ENST00000620847 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.54
GDNF-208ENST00000620847 SNAPC4Q5SXM2 1469 aa11.69□□□□□ -0.54
GDNF-208ENST00000620847 SAMD9Q5K651 1589 aa11.69□□□□□ -0.54
GDNF-208ENST00000620847 FAM50AQ14320 339 aaKnown RBP11.69□□□□□ -0.54
GDNF-208ENST00000620847 FMN1Q68DA7 1419 aa11.68□□□□□ -0.54
GDNF-208ENST00000620847 LRRIQ1Q96JM4 1722 aa11.68□□□□□ -0.54
GDNF-208ENST00000620847 ATP1B4Q9UN42 357 aaPredicted RBP11.66□□□□□ -0.54
GDNF-208ENST00000620847 FGD6Q6ZV73 1430 aa11.64□□□□□ -0.55
GDNF-208ENST00000620847 GAPVD1Q14C86 1478 aa11.64□□□□□ -0.55
GDNF-208ENST00000620847 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
GDNF-208ENST00000620847 THOC2Q8NI27 1593 aaKnown RBP11.63□□□□□ -0.55
GDNF-208ENST00000620847 SIN3AQ96ST3 1273 aa11.62□□□□□ -0.55
GDNF-208ENST00000620847 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
GDNF-208ENST00000620847 GRIN2BQ13224 1484 aa11.62□□□□□ -0.55
GDNF-208ENST00000620847 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
GDNF-208ENST00000620847 PDS5BQ9NTI5 1447 aa11.61□□□□□ -0.55
GDNF-208ENST00000620847 TARBP1Q13395 1621 aaKnown RBP11.6□□□□□ -0.55
GDNF-208ENST00000620847 SUPT6HQ7KZ85 1726 aaKnown RBP11.59□□□□□ -0.55
GDNF-208ENST00000620847 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
GDNF-208ENST00000620847 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
GDNF-208ENST00000620847 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
GDNF-208ENST00000620847 HFM1A2PYH4 1435 aa11.58□□□□□ -0.56
GDNF-208ENST00000620847 PTPRKQ15262 1439 aa11.58□□□□□ -0.56
GDNF-208ENST00000620847 NCOA2Q15596 1464 aa11.58□□□□□ -0.56
GDNF-208ENST00000620847 EHBP1L1Q8N3D4 1523 aa11.58□□□□□ -0.56
GDNF-208ENST00000620847 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
GDNF-208ENST00000620847 MYOM3Q5VTT5 1437 aa11.57□□□□□ -0.56
GDNF-208ENST00000620847 ANP32EQ9BTT0 268 aa11.56□□□□□ -0.56
GDNF-208ENST00000620847 PBRM1Q86U86 1689 aa11.56□□□□□ -0.56
GDNF-208ENST00000620847 ARHGEF11O15085 1522 aa11.56□□□□□ -0.56
GDNF-208ENST00000620847 PPP1R15AO75807 674 aaPredicted RBP11.56□□□□□ -0.56
GDNF-208ENST00000620847 UACAQ9BZF9 1416 aa11.55□□□□□ -0.56
GDNF-208ENST00000620847 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
GDNF-208ENST00000620847 NAIPQ13075 1403 aa11.54□□□□□ -0.56
GDNF-208ENST00000620847 MAGI3Q5TCQ9 1506 aa11.54□□□□□ -0.56
GDNF-208ENST00000620847 KCNH8Q96L42 1107 aa11.52□□□□□ -0.56
GDNF-208ENST00000620847 DNAJC5BQ9UF47 199 aa11.52□□□□□ -0.57
GDNF-208ENST00000620847 HECW1Q76N89 1606 aa11.52□□□□□ -0.57
GDNF-208ENST00000620847 DDX10Q13206 875 aaKnown RBP11.52□□□□□ -0.57
GDNF-208ENST00000620847 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
GDNF-208ENST00000620847 ADAMTS12P58397 1594 aa11.51□□□□□ -0.57
GDNF-208ENST00000620847 IQGAP2Q13576 1575 aa11.51□□□□□ -0.57
GDNF-208ENST00000620847 TCOF1Q13428 1488 aaKnown RBP11.5□□□□□ -0.57
GDNF-208ENST00000620847 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
GDNF-208ENST00000620847 TONSLQ96HA7 1378 aa11.49□□□□□ -0.57
GDNF-208ENST00000620847 KDM5BQ9UGL1 1544 aa11.48□□□□□ -0.57
GDNF-208ENST00000620847 EPRSP07814 1512 aaKnown RBP11.47□□□□□ -0.57
GDNF-208ENST00000620847 BCL11AQ9H165 835 aa11.47□□□□□ -0.57
GDNF-208ENST00000620847 WDR62O43379 1518 aa11.46□□□□□ -0.57
GDNF-208ENST00000620847 AKNAQ7Z591 1439 aa11.46□□□□□ -0.58
GDNF-208ENST00000620847 HIRIP3Q9BW71 556 aaPredicted RBP11.46□□□□□ -0.58
GDNF-208ENST00000620847 MRC2Q9UBG0 1479 aa11.45□□□□□ -0.58
GDNF-208ENST00000620847 CCER2I3L3R5 266 aa11.44□□□□□ -0.58
GDNF-208ENST00000620847 MIA2Q96PC5 1412 aa11.44□□□□□ -0.58
GDNF-208ENST00000620847 DENND4BO75064 1496 aaPredicted RBP11.44□□□□□ -0.58
GDNF-208ENST00000620847 CDK13Q14004 1512 aaKnown RBP11.43□□□□□ -0.58
GDNF-208ENST00000620847 KDM6BO15054 1643 aa11.43□□□□□ -0.58
GDNF-208ENST00000620847 ANP32CO43423 234 aa11.41□□□□□ -0.58
GDNF-208ENST00000620847 RRP7BPQ9NSQ0 103 aa11.4□□□□□ -0.58
GDNF-208ENST00000620847 KIAA0556O60303 1618 aa11.39□□□□□ -0.59
GDNF-208ENST00000620847 IFT140Q96RY7 1462 aa11.39□□□□□ -0.59
GDNF-208ENST00000620847 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
GDNF-208ENST00000620847 DISP1Q96F81 1524 aa11.37□□□□□ -0.59
GDNF-208ENST00000620847 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
GDNF-208ENST00000620847 KIAA0586Q9BVV6 1533 aa11.37□□□□□ -0.59
GDNF-208ENST00000620847 DNMT1P26358 1616 aaKnown RBP11.36□□□□□ -0.59
GDNF-208ENST00000620847 RAPGEF6Q8TEU7 1601 aa11.36□□□□□ -0.59
GDNF-208ENST00000620847 AEBP2Q6ZN18 517 aaPredicted RBP11.35□□□□□ -0.59
GDNF-208ENST00000620847 ROCK1Q13464 1354 aa11.35□□□□□ -0.59
GDNF-208ENST00000620847 DAPK1P53355 1430 aa11.35□□□□□ -0.59
GDNF-208ENST00000620847 NUP153P49790 1475 aaKnown RBP11.35□□□□□ -0.59
GDNF-208ENST00000620847 MPHOSPH9Q99550 1183 aa11.34□□□□□ -0.59
GDNF-208ENST00000620847 TRIM52Q96A61 297 aa11.34□□□□□ -0.59
GDNF-208ENST00000620847 BCANQ96GW7 911 aa11.34□□□□□ -0.59
GDNF-208ENST00000620847 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
GDNF-208ENST00000620847 GRIN2AQ12879 1464 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms