RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.654e-6■■■■□ 24.8
SKP2-209ENST00000620197 CADPSQ9ULU8 1353 aa19.1■□□□□ 0.65
SKP2-209ENST00000620197 EFCAB5A4FU69 1503 aa19.09■□□□□ 0.65
SKP2-209ENST00000620197 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
SKP2-209ENST00000620197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.08■□□□□ 0.65
SKP2-209ENST00000620197 PHLDB1Q86UU1 1377 aa19.08■□□□□ 0.64
SKP2-209ENST00000620197 CUL7Q14999 1698 aa19.08■□□□□ 0.64
SKP2-209ENST00000620197 SETD5Q9C0A6 1442 aa19.06■□□□□ 0.64
SKP2-209ENST00000620197 LRRIQ1Q96JM4 1722 aa19.06■□□□□ 0.64
SKP2-209ENST00000620197 FYCO1Q9BQS8 1478 aa19.06■□□□□ 0.64
SKP2-209ENST00000620197 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
SKP2-209ENST00000620197 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
SKP2-209ENST00000620197 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
SKP2-209ENST00000620197 FHAD1B1AJZ9 1412 aa19.05■□□□□ 0.64
SKP2-209ENST00000620197 SUPT16HQ9Y5B9 1047 aaKnown RBP19.01■□□□□ 0.63
SKP2-209ENST00000620197 SAMD9Q5K651 1589 aa18.99■□□□□ 0.63
SKP2-209ENST00000620197 CASKIN1Q8WXD9 1431 aa18.98■□□□□ 0.63
SKP2-209ENST00000620197 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
SKP2-209ENST00000620197 FANCD2Q9BXW9 1451 aa18.93■□□□□ 0.62
SKP2-209ENST00000620197 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
SKP2-209ENST00000620197 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
SKP2-209ENST00000620197 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
SKP2-209ENST00000620197 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
SKP2-209ENST00000620197 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
SKP2-209ENST00000620197 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
SKP2-209ENST00000620197 KDM5BQ9UGL1 1544 aa18.91■□□□□ 0.62
SKP2-209ENST00000620197 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
SKP2-209ENST00000620197 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
SKP2-209ENST00000620197 ARHGEF11O15085 1522 aa18.87■□□□□ 0.61
SKP2-209ENST00000620197 FHOD3Q2V2M9 1422 aa18.85■□□□□ 0.61
SKP2-209ENST00000620197 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
SKP2-209ENST00000620197 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.61
SKP2-209ENST00000620197 GRIN2BQ13224 1484 aa18.83■□□□□ 0.6
SKP2-209ENST00000620197 HFM1A2PYH4 1435 aa18.82■□□□□ 0.6
SKP2-209ENST00000620197 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
SKP2-209ENST00000620197 GCC2Q8IWJ2 1684 aa18.81■□□□□ 0.6
SKP2-209ENST00000620197 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
SKP2-209ENST00000620197 FMN1Q68DA7 1419 aa18.79■□□□□ 0.6
SKP2-209ENST00000620197 SUPT6HQ7KZ85 1726 aaKnown RBP18.78■□□□□ 0.6
SKP2-209ENST00000620197 TSHZ2Q9NRE2 1034 aa18.77■□□□□ 0.6
SKP2-209ENST00000620197 LAMC3Q9Y6N6 1575 aa18.77■□□□□ 0.59
SKP2-209ENST00000620197 HECW1Q76N89 1606 aa18.76■□□□□ 0.59
SKP2-209ENST00000620197 CCDC18Q5T9S5 1454 aa18.76■□□□□ 0.59
SKP2-209ENST00000620197 UACAQ9BZF9 1416 aa18.76■□□□□ 0.59
SKP2-209ENST00000620197 URB2Q14146 1524 aaKnown RBP18.75■□□□□ 0.59
SKP2-209ENST00000620197 SIN3AQ96ST3 1273 aa18.75■□□□□ 0.59
SKP2-209ENST00000620197 UGGT2Q9NYU1 1516 aa18.75■□□□□ 0.59
SKP2-209ENST00000620197 ITGAEP38570 1179 aa18.74■□□□□ 0.59
SKP2-209ENST00000620197 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
SKP2-209ENST00000620197 TCOF1Q13428 1488 aaKnown RBP18.72■□□□□ 0.59
SKP2-209ENST00000620197 DENND4BO75064 1496 aaPredicted RBP18.72■□□□□ 0.59
SKP2-209ENST00000620197 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
SKP2-209ENST00000620197 NAIPQ13075 1403 aa18.72■□□□□ 0.59
SKP2-209ENST00000620197 MAGI3Q5TCQ9 1506 aa18.71■□□□□ 0.59
SKP2-209ENST00000620197 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
SKP2-209ENST00000620197 NESP48681 1621 aa18.69■□□□□ 0.58
SKP2-209ENST00000620197 TARBP1Q13395 1621 aaKnown RBP18.69■□□□□ 0.58
SKP2-209ENST00000620197 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
SKP2-209ENST00000620197 AKNAQ7Z591 1439 aa18.67■□□□□ 0.58
SKP2-209ENST00000620197 FAM50AQ14320 339 aaKnown RBP18.64■□□□□ 0.58
SKP2-209ENST00000620197 POLR1AO95602 1720 aaPredicted RBP18.64■□□□□ 0.58
SKP2-209ENST00000620197 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
SKP2-209ENST00000620197 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
SKP2-209ENST00000620197 KDM6BO15054 1643 aa18.61■□□□□ 0.57
SKP2-209ENST00000620197 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
SKP2-209ENST00000620197 P3H3Q8IVL6 736 aa18.58■□□□□ 0.56
SKP2-209ENST00000620197 WDR62O43379 1518 aa18.54■□□□□ 0.56
SKP2-209ENST00000620197 MTUS2Q5JR59 1369 aa18.53■□□□□ 0.56
SKP2-209ENST00000620197 ADAMTS12P58397 1594 aa18.53■□□□□ 0.56
SKP2-209ENST00000620197 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
SKP2-209ENST00000620197 TONSLQ96HA7 1378 aa18.52■□□□□ 0.55
SKP2-209ENST00000620197 IQGAP2Q13576 1575 aa18.5■□□□□ 0.55
SKP2-209ENST00000620197 MIA2Q96PC5 1412 aa18.49■□□□□ 0.55
SKP2-209ENST00000620197 EPRSP07814 1512 aaKnown RBP18.48■□□□□ 0.55
SKP2-209ENST00000620197 DNMT1P26358 1616 aaKnown RBP18.47■□□□□ 0.55
SKP2-209ENST00000620197 FKBP8Q14318 412 aa18.46■□□□□ 0.55
SKP2-209ENST00000620197 ANP32CO43423 234 aa18.46■□□□□ 0.55
SKP2-209ENST00000620197 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
SKP2-209ENST00000620197 TEX14Q8IWB6 1497 aa18.43■□□□□ 0.54
SKP2-209ENST00000620197 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
SKP2-209ENST00000620197 NCOA1Q15788 1441 aa18.41■□□□□ 0.54
SKP2-209ENST00000620197 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
SKP2-209ENST00000620197 WASHC2AQ641Q2 1341 aa18.4■□□□□ 0.54
SKP2-209ENST00000620197 ROCK1Q13464 1354 aa18.4■□□□□ 0.54
SKP2-209ENST00000620197 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.53
SKP2-209ENST00000620197 CNTLNQ9NXG0 1405 aa18.39■□□□□ 0.53
SKP2-209ENST00000620197 CDK13Q14004 1512 aaKnown RBP18.38■□□□□ 0.53
SKP2-209ENST00000620197 RPRD2Q5VT52 1461 aaKnown RBP18.38■□□□□ 0.53
SKP2-209ENST00000620197 CROCC2H7BZ55 1655 aa18.38■□□□□ 0.53
SKP2-209ENST00000620197 ADGBQ8N7X0 1667 aa18.36■□□□□ 0.53
SKP2-209ENST00000620197 KIAA0556O60303 1618 aa18.36■□□□□ 0.53
SKP2-209ENST00000620197 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
SKP2-209ENST00000620197 ADCY10Q96PN6 1610 aa18.35■□□□□ 0.53
SKP2-209ENST00000620197 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
SKP2-209ENST00000620197 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
SKP2-209ENST00000620197 BCANQ96GW7 911 aa18.34■□□□□ 0.53
SKP2-209ENST00000620197 RBM19Q9Y4C8 960 aaKnown RBP18.33■□□□□ 0.52
SKP2-209ENST00000620197 ANKRD30BQ9BXX2 1392 aa18.33■□□□□ 0.52
SKP2-209ENST00000620197 DAPK1P53355 1430 aa18.33■□□□□ 0.52
SKP2-209ENST00000620197 DISP1Q96F81 1524 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms