RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 SOGA1O94964 1423 aa10.87□□□□□ -0.67
SSX4B-202ENST00000619890 FBXO41Q8TF61 875 aa10.86□□□□□ -0.67
SSX4B-202ENST00000619890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.86□□□□□ -0.67
SSX4B-202ENST00000619890 MAGI1Q96QZ7 1491 aaPredicted RBP10.86□□□□□ -0.67
SSX4B-202ENST00000619890 FAM69CQ0P6D2 419 aa10.85□□□□□ -0.67
SSX4B-202ENST00000619890 SYNJ2O15056 1496 aa10.85□□□□□ -0.67
SSX4B-202ENST00000619890 KIF13AQ9H1H9 1805 aa10.83□□□□□ -0.68
SSX4B-202ENST00000619890 ERCC6L2Q5T890 1561 aa10.82□□□□□ -0.68
SSX4B-202ENST00000619890 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
SSX4B-202ENST00000619890 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
SSX4B-202ENST00000619890 ABCC10Q5T3U5 1492 aa10.78□□□□□ -0.68
SSX4B-202ENST00000619890 WDR97A6NE52 1622 aa10.76□□□□□ -0.69
SSX4B-202ENST00000619890 HECW2Q9P2P5 1572 aa10.75□□□□□ -0.69
SSX4B-202ENST00000619890 KDM6BO15054 1643 aa10.73□□□□□ -0.69
SSX4B-202ENST00000619890 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
SSX4B-202ENST00000619890 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
SSX4B-202ENST00000619890 ADGRL1O94910 1474 aa10.72□□□□□ -0.69
SSX4B-202ENST00000619890 FGD5Q6ZNL6 1462 aa10.72□□□□□ -0.69
SSX4B-202ENST00000619890 LMTK3Q96Q04 1460 aa10.72□□□□□ -0.69
SSX4B-202ENST00000619890 CUX1P39880 1505 aa10.71□□□□□ -0.69
SSX4B-202ENST00000619890 SOCS7O14512 581 aa10.7□□□□□ -0.7
SSX4B-202ENST00000619890 KCNA4P22459 653 aa10.68□□□□□ -0.7
SSX4B-202ENST00000619890 BIVM-ERCC5R4GMW8 1640 aa10.68□□□□□ -0.7
SSX4B-202ENST00000619890 ILDR2Q71H61 639 aa10.67□□□□□ -0.7
SSX4B-202ENST00000619890 DIP2BQ9P265 1576 aa10.67□□□□□ -0.7
SSX4B-202ENST00000619890 GRIN2AQ12879 1464 aa10.67□□□□□ -0.7
SSX4B-202ENST00000619890 NUP160Q12769 1436 aa10.67□□□□□ -0.7
SSX4B-202ENST00000619890 TOP2BQ02880 1626 aa10.66□□□□□ -0.7
SSX4B-202ENST00000619890 MAPKBP1O60336 1514 aa10.65□□□□□ -0.7
SSX4B-202ENST00000619890 PRG4Q92954 1404 aaPredicted RBP10.65□□□□□ -0.7
SSX4B-202ENST00000619890 JPH4Q96JJ6 628 aa10.64□□□□□ -0.71
SSX4B-202ENST00000619890 SHROOM2Q13796 1616 aa10.64□□□□□ -0.71
SSX4B-202ENST00000619890 WRNQ14191 1432 aaPredicted RBP eCLIP10.62□□□□□ -0.71
SSX4B-202ENST00000619890 U3KPZ7 1027 aaPredicted RBP10.62□□□□□ -0.71
SSX4B-202ENST00000619890 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
SSX4B-202ENST00000619890 ABCA5Q8WWZ7 1642 aa10.6□□□□□ -0.71
SSX4B-202ENST00000619890 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
SSX4B-202ENST00000619890 TSPOAP1O95153 1857 aa10.59□□□□□ -0.71
SSX4B-202ENST00000619890 COL17A1Q9UMD9 1497 aaPredicted RBP10.56□□□□□ -0.72
SSX4B-202ENST00000619890 DISP3Q9P2K9 1392 aa10.55□□□□□ -0.72
SSX4B-202ENST00000619890 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
SSX4B-202ENST00000619890 FHAD1B1AJZ9 1412 aa10.54□□□□□ -0.72
SSX4B-202ENST00000619890 ADCY10Q96PN6 1610 aa10.54□□□□□ -0.72
SSX4B-202ENST00000619890 ADAMTS12P58397 1594 aa10.51□□□□□ -0.73
SSX4B-202ENST00000619890 ERICH3Q5RHP9 1530 aa10.5□□□□□ -0.73
SSX4B-202ENST00000619890 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
SSX4B-202ENST00000619890 PPRC1Q5VV67 1664 aaKnown RBP10.47□□□□□ -0.73
SSX4B-202ENST00000619890 CAPN15O75808 1086 aa10.45□□□□□ -0.74
SSX4B-202ENST00000619890 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
SSX4B-202ENST00000619890 GLI2P10070 1586 aa10.44□□□□□ -0.74
SSX4B-202ENST00000619890 ASXL2Q76L83 1435 aa10.44□□□□□ -0.74
SSX4B-202ENST00000619890 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
SSX4B-202ENST00000619890 CUL7Q14999 1698 aa10.44□□□□□ -0.74
SSX4B-202ENST00000619890 DSG3P32926 999 aa10.43□□□□□ -0.74
SSX4B-202ENST00000619890 PLB1Q6P1J6 1458 aa10.42□□□□□ -0.74
SSX4B-202ENST00000619890 APLP2Q06481 763 aa10.42□□□□□ -0.74
SSX4B-202ENST00000619890 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
SSX4B-202ENST00000619890 PTPRGP23470 1445 aa10.41□□□□□ -0.74
SSX4B-202ENST00000619890 TTBK1Q5TCY1 1321 aaPredicted RBP10.39□□□□□ -0.75
SSX4B-202ENST00000619890 ABCC2Q92887 1545 aa10.39□□□□□ -0.75
SSX4B-202ENST00000619890 TEX14Q8IWB6 1497 aa10.38□□□□□ -0.75
SSX4B-202ENST00000619890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
SSX4B-202ENST00000619890 HNRNPUL2Q1KMD3 747 aaKnown RBP10.38□□□□□ -0.75
SSX4B-202ENST00000619890 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
SSX4B-202ENST00000619890 PTPRMP28827 1452 aa10.36□□□□□ -0.75
SSX4B-202ENST00000619890 EPRSP07814 1512 aaKnown RBP10.36□□□□□ -0.75
SSX4B-202ENST00000619890 KIAA0586Q9BVV6 1533 aa10.35□□□□□ -0.75
SSX4B-202ENST00000619890 MAP3K4Q9Y6R4 1608 aa10.33□□□□□ -0.76
SSX4B-202ENST00000619890 HSPA2P54652 639 aa10.33□□□□□ -0.76
SSX4B-202ENST00000619890 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
SSX4B-202ENST00000619890 PCF11O94913 1555 aaKnown RBP10.32□□□□□ -0.76
SSX4B-202ENST00000619890 TNIKQ9UKE5 1360 aa10.31□□□□□ -0.76
SSX4B-202ENST00000619890 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
SSX4B-202ENST00000619890 UHRF1BP1LA0JNW5 1464 aa10.3□□□□□ -0.76
SSX4B-202ENST00000619890 IGF1RP08069 1367 aa10.29□□□□□ -0.76
SSX4B-202ENST00000619890 SPATA31D1Q6ZQQ2 1576 aa10.29□□□□□ -0.76
SSX4B-202ENST00000619890 UACAQ9BZF9 1416 aa10.28□□□□□ -0.76
SSX4B-202ENST00000619890 KIF21BO75037 1637 aa10.27□□□□□ -0.77
SSX4B-202ENST00000619890 KDM5BQ9UGL1 1544 aa10.27□□□□□ -0.77
SSX4B-202ENST00000619890 CARMIL2Q6F5E8 1435 aa10.26□□□□□ -0.77
SSX4B-202ENST00000619890 ADAMTSL3P82987 1691 aa10.26□□□□□ -0.77
SSX4B-202ENST00000619890 CARMIL1Q5VZK9 1371 aa10.26□□□□□ -0.77
SSX4B-202ENST00000619890 CD109Q6YHK3 1445 aa10.25□□□□□ -0.77
SSX4B-202ENST00000619890 IQGAP2Q13576 1575 aa10.25□□□□□ -0.77
SSX4B-202ENST00000619890 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
SSX4B-202ENST00000619890 RAPGEF2Q9Y4G8 1499 aa10.24□□□□□ -0.77
SSX4B-202ENST00000619890 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
SSX4B-202ENST00000619890 KCNH8Q96L42 1107 aa10.23□□□□□ -0.77
SSX4B-202ENST00000619890 EEA1Q15075 1411 aa10.23□□□□□ -0.77
SSX4B-202ENST00000619890 ARID4BQ4LE39 1312 aaPredicted RBP10.21□□□□□ -0.78
SSX4B-202ENST00000619890 WDR7Q9Y4E6 1490 aa10.2□□□□□ -0.78
SSX4B-202ENST00000619890 ARAP3Q8WWN8 1544 aa10.19□□□□□ -0.78
SSX4B-202ENST00000619890 PRXQ9BXM0 1461 aa10.19□□□□□ -0.78
SSX4B-202ENST00000619890 MYCNP04198 464 aaPredicted RBP10.19□□□□□ -0.78
SSX4B-202ENST00000619890 RAPGEF3O95398 923 aa10.18□□□□□ -0.78
SSX4B-202ENST00000619890 UGGT2Q9NYU1 1516 aa10.17□□□□□ -0.78
SSX4B-202ENST00000619890 ABCB7O75027 752 aa10.17□□□□□ -0.78
SSX4B-202ENST00000619890 ZCCHC11Q5TAX3 1644 aaKnown RBP10.17□□□□□ -0.78
SSX4B-202ENST00000619890 MADDQ8WXG6 1647 aa10.17□□□□□ -0.78
SSX4B-202ENST00000619890 BCORL1Q5H9F3 1711 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms