RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 GRIN2BQ13224 1484 aa9.13□□□□□ -0.95
GTDC1-220ENST00000618778 RIMBP3CA6NJZ7 1639 aa9.12□□□□□ -0.95
GTDC1-220ENST00000618778 RIMBP3BA6NNM3 1639 aa9.12□□□□□ -0.95
GTDC1-220ENST00000618778 RIMBP3Q9UFD9 1639 aa9.12□□□□□ -0.95
GTDC1-220ENST00000618778 MAGI1Q96QZ7 1491 aaPredicted RBP9.12□□□□□ -0.95
GTDC1-220ENST00000618778 FBLN2P98095 1184 aa9.1□□□□□ -0.95
GTDC1-220ENST00000618778 CLASP1Q7Z460 1538 aa9.1□□□□□ -0.95
GTDC1-220ENST00000618778 SYNJ2O15056 1496 aa9.09□□□□□ -0.95
GTDC1-220ENST00000618778 OSCARQ8IYS5 282 aa9.09□□□□□ -0.95
GTDC1-220ENST00000618778 CEP170Q5SW79 1584 aa9.08□□□□□ -0.96
GTDC1-220ENST00000618778 ARHGEF11O15085 1522 aa9.08□□□□□ -0.96
GTDC1-220ENST00000618778 SLC4A2P04920 1241 aa9.07□□□□□ -0.96
GTDC1-220ENST00000618778 ERICH3Q5RHP9 1530 aa9.06□□□□□ -0.96
GTDC1-220ENST00000618778 GRIN2AQ12879 1464 aa9.05□□□□□ -0.96
GTDC1-220ENST00000618778 U3KPZ7 1027 aaPredicted RBP9.05□□□□□ -0.96
GTDC1-220ENST00000618778 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
GTDC1-220ENST00000618778 ERCC6L2Q5T890 1561 aa9.04□□□□□ -0.96
GTDC1-220ENST00000618778 CHMP7Q8WUX9 453 aaPredicted RBP9.03□□□□□ -0.96
GTDC1-220ENST00000618778 ARAP1Q96P48 1450 aa9.02□□□□□ -0.97
GTDC1-220ENST00000618778 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
GTDC1-220ENST00000618778 FHAD1B1AJZ9 1412 aa9.01□□□□□ -0.97
GTDC1-220ENST00000618778 CUL7Q14999 1698 aa9.01□□□□□ -0.97
GTDC1-220ENST00000618778 NUP160Q12769 1436 aa9□□□□□ -0.97
GTDC1-220ENST00000618778 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
GTDC1-220ENST00000618778 SHROOM2Q13796 1616 aa8.99□□□□□ -0.97
GTDC1-220ENST00000618778 IGF1RP08069 1367 aa8.99□□□□□ -0.97
GTDC1-220ENST00000618778 SLC4A1APQ9BWU0 796 aaKnown RBP8.96□□□□□ -0.97
GTDC1-220ENST00000618778 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
GTDC1-220ENST00000618778 CARMIL1Q5VZK9 1371 aa8.92□□□□□ -0.98
GTDC1-220ENST00000618778 CTTNBP2Q8WZ74 1663 aa8.91□□□□□ -0.98
GTDC1-220ENST00000618778 PRG4Q92954 1404 aaPredicted RBP8.89□□□□□ -0.99
GTDC1-220ENST00000618778 IQGAP2Q13576 1575 aa8.88□□□□□ -0.99
GTDC1-220ENST00000618778 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
GTDC1-220ENST00000618778 EHMT2Q96KQ7 1210 aa8.88□□□□□ -0.99
GTDC1-220ENST00000618778 KIAA0586Q9BVV6 1533 aa8.88□□□□□ -0.99
GTDC1-220ENST00000618778 SPINK5Q9NQ38 1064 aaPredicted RBP8.87□□□□□ -0.99
GTDC1-220ENST00000618778 PRXQ9BXM0 1461 aa8.86□□□□□ -0.99
GTDC1-220ENST00000618778 ADCY10Q96PN6 1610 aa8.85□□□□□ -0.99
GTDC1-220ENST00000618778 JPH4Q96JJ6 628 aa8.84□□□□□ -0.99
GTDC1-220ENST00000618778 DISP1Q96F81 1524 aa8.84□□□□□ -1
GTDC1-220ENST00000618778 FAM9AQ8IZU1 332 aaPredicted RBP8.83□□□□□ -1
GTDC1-220ENST00000618778 KIAA0556O60303 1618 aa8.83□□□□□ -1
GTDC1-220ENST00000618778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.82□□□□□ -1
GTDC1-220ENST00000618778 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
GTDC1-220ENST00000618778 CAPN15O75808 1086 aa8.82□□□□□ -1
GTDC1-220ENST00000618778 UGGT2Q9NYU1 1516 aa8.81□□□□□ -1
GTDC1-220ENST00000618778 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
GTDC1-220ENST00000618778 KIF13AQ9H1H9 1805 aa8.8□□□□□ -1
GTDC1-220ENST00000618778 MYCNP04198 464 aaPredicted RBP8.8□□□□□ -1
GTDC1-220ENST00000618778 KIF21BO75037 1637 aa8.79□□□□□ -1
GTDC1-220ENST00000618778 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
GTDC1-220ENST00000618778 FOXD4L1Q9NU39 408 aa8.79□□□□□ -1
GTDC1-220ENST00000618778 APLP2Q06481 763 aa8.78□□□□□ -1
GTDC1-220ENST00000618778 DSG3P32926 999 aa8.77□□□□□ -1.01
GTDC1-220ENST00000618778 CSRNP3Q8WYN3 585 aa8.77□□□□□ -1.01
GTDC1-220ENST00000618778 EEA1Q15075 1411 aa8.76□□□□□ -1.01
GTDC1-220ENST00000618778 SAMD9Q5K651 1589 aa8.76□□□□□ -1.01
GTDC1-220ENST00000618778 ABCC2Q92887 1545 aa8.74□□□□□ -1.01
GTDC1-220ENST00000618778 TNIKQ9UKE5 1360 aa8.74□□□□□ -1.01
GTDC1-220ENST00000618778 ZBTB22O15209 634 aa8.74□□□□□ -1.01
GTDC1-220ENST00000618778 TRHP20396 242 aaPredicted RBP8.74□□□□□ -1.01
GTDC1-220ENST00000618778 ZCCHC11Q5TAX3 1644 aaKnown RBP8.73□□□□□ -1.01
GTDC1-220ENST00000618778 PTPRGP23470 1445 aa8.73□□□□□ -1.01
GTDC1-220ENST00000618778 CARMIL2Q6F5E8 1435 aa8.73□□□□□ -1.01
GTDC1-220ENST00000618778 PLB1Q6P1J6 1458 aa8.73□□□□□ -1.01
GTDC1-220ENST00000618778 DIP2BQ9P265 1576 aa8.73□□□□□ -1.01
GTDC1-220ENST00000618778 RANGAP1P46060 587 aaPredicted RBP8.72□□□□□ -1.01
GTDC1-220ENST00000618778 ZNF219Q9P2Y4 722 aaPredicted RBP8.72□□□□□ -1.01
GTDC1-220ENST00000618778 TSPOAP1O95153 1857 aa8.72□□□□□ -1.01
GTDC1-220ENST00000618778 MAPKBP1O60336 1514 aa8.72□□□□□ -1.01
GTDC1-220ENST00000618778 ABCA8O94911 1581 aa8.71□□□□□ -1.01
GTDC1-220ENST00000618778 P3H3Q8IVL6 736 aa8.71□□□□□ -1.02
GTDC1-220ENST00000618778 FHOD3Q2V2M9 1422 aa8.7□□□□□ -1.02
GTDC1-220ENST00000618778 UACAQ9BZF9 1416 aa8.69□□□□□ -1.02
GTDC1-220ENST00000618778 GOLGA3Q08378 1498 aa8.69□□□□□ -1.02
GTDC1-220ENST00000618778 UHRF1BP1LA0JNW5 1464 aa8.68□□□□□ -1.02
GTDC1-220ENST00000618778 PPRC1Q5VV67 1664 aaKnown RBP8.68□□□□□ -1.02
GTDC1-220ENST00000618778 RAPGEF6Q8TEU7 1601 aa8.67□□□□□ -1.02
GTDC1-220ENST00000618778 KDM5BQ9UGL1 1544 aa8.67□□□□□ -1.02
GTDC1-220ENST00000618778 LRRIQ1Q96JM4 1722 aa8.67□□□□□ -1.02
GTDC1-220ENST00000618778 ABCC10Q5T3U5 1492 aa8.67□□□□□ -1.02
GTDC1-220ENST00000618778 ARID3CA6NKF2 412 aa8.66□□□□□ -1.02
GTDC1-220ENST00000618778 ASXL2Q76L83 1435 aa8.66□□□□□ -1.02
GTDC1-220ENST00000618778 ARHGAP35Q9NRY4 1499 aa8.65□□□□□ -1.02
GTDC1-220ENST00000618778 EFCAB5A4FU69 1503 aa8.65□□□□□ -1.03
GTDC1-220ENST00000618778 NUP153P49790 1475 aaKnown RBP8.63□□□□□ -1.03
GTDC1-220ENST00000618778 ABCB7O75027 752 aa8.63□□□□□ -1.03
GTDC1-220ENST00000618778 MAP3K4Q9Y6R4 1608 aa8.63□□□□□ -1.03
GTDC1-220ENST00000618778 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
GTDC1-220ENST00000618778 EPRSP07814 1512 aaKnown RBP8.62□□□□□ -1.03
GTDC1-220ENST00000618778 FAM69CQ0P6D2 419 aa8.62□□□□□ -1.03
GTDC1-220ENST00000618778 CDK13Q14004 1512 aaKnown RBP8.61□□□□□ -1.03
GTDC1-220ENST00000618778 ATP10BO94823 1461 aa8.61□□□□□ -1.03
GTDC1-220ENST00000618778 WDR7Q9Y4E6 1490 aa8.61□□□□□ -1.03
GTDC1-220ENST00000618778 PCF11O94913 1555 aaKnown RBP8.61□□□□□ -1.03
GTDC1-220ENST00000618778 NPM1P06748 294 aaKnown RBP eCLIP8.6□□□□□ -1.03
GTDC1-220ENST00000618778 GLI2P10070 1586 aa8.6□□□□□ -1.03
GTDC1-220ENST00000618778 LOC105371045A0A1W2PR82 267 aa8.6□□□□□ -1.03
GTDC1-220ENST00000618778 ATF5Q9Y2D1 282 aaPredicted RBP8.6□□□□□ -1.03
GTDC1-220ENST00000618778 CFAP43Q8NDM7 1665 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms