RNA–Protein interactions for RNA: ENST00000617633.4

DDX52-213, Transcript of DExD-box helicase 52, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX52, Length 6,362 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-213ENST00000617633 PPARGC1BQ86YN6 1023 aaKnown RBP13.46□□□□□ -0.26
DDX52-213ENST00000617633 NEFLP07196 543 aa13.45□□□□□ -0.26
DDX52-213ENST00000617633 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
DDX52-213ENST00000617633 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
DDX52-213ENST00000617633 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
DDX52-213ENST00000617633 NPM2Q86SE8 214 aaKnown RBP13.43□□□□□ -0.26
DDX52-213ENST00000617633 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
DDX52-213ENST00000617633 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
DDX52-213ENST00000617633 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
DDX52-213ENST00000617633 LAMC3Q9Y6N6 1575 aa13.38□□□□□ -0.27
DDX52-213ENST00000617633 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
DDX52-213ENST00000617633 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
DDX52-213ENST00000617633 MLECQ14165 292 aa13.35□□□□□ -0.27
DDX52-213ENST00000617633 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
DDX52-213ENST00000617633 NEUROD1Q13562 356 aa13.33□□□□□ -0.28
DDX52-213ENST00000617633 PTPRGP23470 1445 aa13.33□□□□□ -0.28
DDX52-213ENST00000617633 JPH4Q96JJ6 628 aa13.33□□□□□ -0.28
DDX52-213ENST00000617633 FMN1Q68DA7 1419 aa13.32□□□□□ -0.28
DDX52-213ENST00000617633 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
DDX52-213ENST00000617633 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
DDX52-213ENST00000617633 CENPBP07199 599 aaPredicted RBP13.31□□□□□ -0.28
DDX52-213ENST00000617633 GRIN2BQ13224 1484 aa13.31□□□□□ -0.28
DDX52-213ENST00000617633 WIZO95785 1651 aa13.3□□□□□ -0.28
DDX52-213ENST00000617633 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
DDX52-213ENST00000617633 GAPVD1Q14C86 1478 aa13.3□□□□□ -0.28
DDX52-213ENST00000617633 A0A0G2JS52 829 aa13.29□□□□□ -0.28
DDX52-213ENST00000617633 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
DDX52-213ENST00000617633 MYT1Q01538 1121 aa13.28□□□□□ -0.28
DDX52-213ENST00000617633 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.29
DDX52-213ENST00000617633 POGZQ7Z3K3 1410 aa13.25□□□□□ -0.29
DDX52-213ENST00000617633 CDCA8Q53HL2 280 aa13.25□□□□□ -0.29
DDX52-213ENST00000617633 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
DDX52-213ENST00000617633 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
DDX52-213ENST00000617633 TONSLQ96HA7 1378 aa13.22□□□□□ -0.29
DDX52-213ENST00000617633 POGKQ9P215 609 aa13.22□□□□□ -0.29
DDX52-213ENST00000617633 CCDC18Q5T9S5 1454 aa13.21□□□□□ -0.29
DDX52-213ENST00000617633 TNIKQ9UKE5 1360 aa13.2□□□□□ -0.3
DDX52-213ENST00000617633 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
DDX52-213ENST00000617633 SYNJ1O43426 1573 aa13.17□□□□□ -0.3
DDX52-213ENST00000617633 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
DDX52-213ENST00000617633 SPAG9O60271 1321 aaKnown RBP13.16□□□□□ -0.3
DDX52-213ENST00000617633 GGT6Q6P531 493 aa13.15□□□□□ -0.3
DDX52-213ENST00000617633 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
DDX52-213ENST00000617633 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX52-213ENST00000617633 LMOD2Q6P5Q4 547 aa13.14□□□□□ -0.31
DDX52-213ENST00000617633 DNMBPQ6XZF7 1577 aa13.13□□□□□ -0.31
DDX52-213ENST00000617633 CFTRP13569 1480 aa13.13□□□□□ -0.31
DDX52-213ENST00000617633 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
DDX52-213ENST00000617633 DAXXQ9UER7 740 aaPredicted RBP13.11□□□□□ -0.31
DDX52-213ENST00000617633 ERICH6Q7L0X2 663 aa13.11□□□□□ -0.31
DDX52-213ENST00000617633 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
DDX52-213ENST00000617633 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
DDX52-213ENST00000617633 NPHP1O15259 732 aa13.09□□□□□ -0.31
DDX52-213ENST00000617633 ANP32CO43423 234 aa13.09□□□□□ -0.31
DDX52-213ENST00000617633 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.31
DDX52-213ENST00000617633 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDX52-213ENST00000617633 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
DDX52-213ENST00000617633 ARHGAP35Q9NRY4 1499 aa13.08□□□□□ -0.32
DDX52-213ENST00000617633 BICRAQ9NZM4 1560 aa13.06□□□□□ -0.32
DDX52-213ENST00000617633 SYNJ2O15056 1496 aa13.06□□□□□ -0.32
DDX52-213ENST00000617633 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.321e-8■■■■■ 28.7
DDX52-213ENST00000617633 PRG4Q92954 1404 aaPredicted RBP13.06□□□□□ -0.32
DDX52-213ENST00000617633 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
DDX52-213ENST00000617633 RRP7BPQ9NSQ0 103 aa13.05□□□□□ -0.32
DDX52-213ENST00000617633 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
DDX52-213ENST00000617633 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
DDX52-213ENST00000617633 SNAPC4Q5SXM2 1469 aa13.05□□□□□ -0.32
DDX52-213ENST00000617633 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
DDX52-213ENST00000617633 KDM2AQ9Y2K7 1162 aa13.04□□□□□ -0.32
DDX52-213ENST00000617633 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
DDX52-213ENST00000617633 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
DDX52-213ENST00000617633 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
DDX52-213ENST00000617633 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
DDX52-213ENST00000617633 UACAQ9BZF9 1416 aa13.03□□□□□ -0.32
DDX52-213ENST00000617633 NESP48681 1621 aa13.02□□□□□ -0.33
DDX52-213ENST00000617633 PRDM2Q13029 1718 aa13□□□□□ -0.33
DDX52-213ENST00000617633 CLSPNQ9HAW4 1339 aa13□□□□□ -0.33
DDX52-213ENST00000617633 KIF3BO15066 747 aa13□□□□□ -0.33
DDX52-213ENST00000617633 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
DDX52-213ENST00000617633 TMC1Q8TDI8 760 aa12.99□□□□□ -0.33
DDX52-213ENST00000617633 PLEKHH2Q8IVE3 1493 aa12.99□□□□□ -0.33
DDX52-213ENST00000617633 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
DDX52-213ENST00000617633 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
DDX52-213ENST00000617633 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDX52-213ENST00000617633 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
DDX52-213ENST00000617633 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.34
DDX52-213ENST00000617633 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
DDX52-213ENST00000617633 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
DDX52-213ENST00000617633 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
DDX52-213ENST00000617633 ATF3P18847 181 aa12.94□□□□□ -0.34
DDX52-213ENST00000617633 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
DDX52-213ENST00000617633 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
DDX52-213ENST00000617633 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
DDX52-213ENST00000617633 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
DDX52-213ENST00000617633 ARHGAP5Q13017 1502 aa12.89□□□□□ -0.35
DDX52-213ENST00000617633 CUL7Q14999 1698 aa12.89□□□□□ -0.35
DDX52-213ENST00000617633 THEMISQ8N1K5 641 aaPredicted RBP12.88□□□□□ -0.35
DDX52-213ENST00000617633 SRPK2P78362 688 aaKnown RBP12.88□□□□□ -0.35
DDX52-213ENST00000617633 PLB1Q6P1J6 1458 aa12.87□□□□□ -0.35
DDX52-213ENST00000617633 ARXQ96QS3 562 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms