RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 WDR97A6NE52 1622 aa13.37□□□□□ -0.27
MCM3-207ENST00000616552 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
MCM3-207ENST00000616552 CCNB3Q8WWL7 1395 aa13.35□□□□□ -0.27
MCM3-207ENST00000616552 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
MCM3-207ENST00000616552 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
MCM3-207ENST00000616552 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
MCM3-207ENST00000616552 ERICH6Q7L0X2 663 aa13.34□□□□□ -0.27
MCM3-207ENST00000616552 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.27
MCM3-207ENST00000616552 ANP32CO43423 234 aa13.33□□□□□ -0.28
MCM3-207ENST00000616552 MAPKBP1O60336 1514 aa13.32□□□□□ -0.28
MCM3-207ENST00000616552 NBR1Q14596 966 aa13.31□□□□□ -0.28
MCM3-207ENST00000616552 CCDC184Q52MB2 194 aa13.28□□□□□ -0.28
MCM3-207ENST00000616552 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
MCM3-207ENST00000616552 RRBP1Q9P2E9 1410 aaKnown RBP13.28□□□□□ -0.28
MCM3-207ENST00000616552 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.28
MCM3-207ENST00000616552 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
MCM3-207ENST00000616552 DEKP35659 375 aaKnown RBP13.25□□□□□ -0.29
MCM3-207ENST00000616552 TOP2BQ02880 1626 aa13.23□□□□□ -0.29
MCM3-207ENST00000616552 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
MCM3-207ENST00000616552 MAP3K1Q13233 1512 aa13.21□□□□□ -0.29
MCM3-207ENST00000616552 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.29
MCM3-207ENST00000616552 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
MCM3-207ENST00000616552 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
MCM3-207ENST00000616552 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
MCM3-207ENST00000616552 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
MCM3-207ENST00000616552 CCER2I3L3R5 266 aa13.18□□□□□ -0.3
MCM3-207ENST00000616552 ARHGAP35Q9NRY4 1499 aa13.17□□□□□ -0.3
MCM3-207ENST00000616552 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
MCM3-207ENST00000616552 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
MCM3-207ENST00000616552 RTN4Q9NQC3 1192 aaKnown RBP13.16□□□□□ -0.3
MCM3-207ENST00000616552 NESP48681 1621 aa13.14□□□□□ -0.31
MCM3-207ENST00000616552 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
MCM3-207ENST00000616552 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
MCM3-207ENST00000616552 ARID3CA6NKF2 412 aa13.1□□□□□ -0.31
MCM3-207ENST00000616552 WASHC2AQ641Q2 1341 aa13.08□□□□□ -0.32
MCM3-207ENST00000616552 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
MCM3-207ENST00000616552 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.32
MCM3-207ENST00000616552 FOXD1Q16676 465 aa13.07□□□□□ -0.32
MCM3-207ENST00000616552 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
MCM3-207ENST00000616552 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
MCM3-207ENST00000616552 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
MCM3-207ENST00000616552 HSPA5P11021 654 aaKnown RBP13.06□□□□□ -0.32
MCM3-207ENST00000616552 TIMELESSQ9UNS1 1208 aa13.06□□□□□ -0.32
MCM3-207ENST00000616552 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
MCM3-207ENST00000616552 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
MCM3-207ENST00000616552 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
MCM3-207ENST00000616552 MRS2Q9HD23 443 aa13.03□□□□□ -0.32
MCM3-207ENST00000616552 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.03□□□□□ -0.32
MCM3-207ENST00000616552 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.32
MCM3-207ENST00000616552 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
MCM3-207ENST00000616552 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
MCM3-207ENST00000616552 RRP7BPQ9NSQ0 103 aa13.01□□□□□ -0.33
MCM3-207ENST00000616552 CFTRP13569 1480 aa13.01□□□□□ -0.33
MCM3-207ENST00000616552 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
MCM3-207ENST00000616552 CUX1P39880 1505 aa13.01□□□□□ -0.33
MCM3-207ENST00000616552 PRDM2Q13029 1718 aa13□□□□□ -0.33
MCM3-207ENST00000616552 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.339e-8■■■■■ 47.8
MCM3-207ENST00000616552 AKNAQ7Z591 1439 aa12.99□□□□□ -0.33
MCM3-207ENST00000616552 TIAM1Q13009 1591 aa12.99□□□□□ -0.33
MCM3-207ENST00000616552 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
MCM3-207ENST00000616552 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
MCM3-207ENST00000616552 ERCC6Q03468 1493 aa12.98□□□□□ -0.33
MCM3-207ENST00000616552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.98□□□□□ -0.33
MCM3-207ENST00000616552 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
MCM3-207ENST00000616552 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
MCM3-207ENST00000616552 SKAP1Q86WV1 359 aa12.96□□□□□ -0.33
MCM3-207ENST00000616552 IGF1RP08069 1367 aa12.96□□□□□ -0.33
MCM3-207ENST00000616552 PDS5BQ9NTI5 1447 aa12.95□□□□□ -0.34
MCM3-207ENST00000616552 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
MCM3-207ENST00000616552 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
MCM3-207ENST00000616552 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
MCM3-207ENST00000616552 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
MCM3-207ENST00000616552 CARMIL1Q5VZK9 1371 aa12.91□□□□□ -0.34
MCM3-207ENST00000616552 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
MCM3-207ENST00000616552 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
MCM3-207ENST00000616552 EIF4G2P78344 907 aaKnown RBP eCLIP12.9□□□□□ -0.34
MCM3-207ENST00000616552 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
MCM3-207ENST00000616552 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
MCM3-207ENST00000616552 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
MCM3-207ENST00000616552 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
MCM3-207ENST00000616552 ZNF326Q5BKZ1 582 aaKnown RBP12.88□□□□□ -0.35
MCM3-207ENST00000616552 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
MCM3-207ENST00000616552 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
MCM3-207ENST00000616552 PCF11O94913 1555 aaKnown RBP12.87□□□□□ -0.35
MCM3-207ENST00000616552 ZBED9Q6R2W3 1325 aa12.85□□□□□ -0.35
MCM3-207ENST00000616552 KDM5BQ9UGL1 1544 aa12.85□□□□□ -0.35
MCM3-207ENST00000616552 SLC4A3P48751 1232 aa12.83□□□□□ -0.36
MCM3-207ENST00000616552 FGD6Q6ZV73 1430 aa12.83□□□□□ -0.36
MCM3-207ENST00000616552 NEFMP07197 916 aa12.83□□□□□ -0.36
MCM3-207ENST00000616552 KIF7Q2M1P5 1343 aa12.82□□□□□ -0.36
MCM3-207ENST00000616552 MTUS2Q5JR59 1369 aa12.82□□□□□ -0.36
MCM3-207ENST00000616552 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
MCM3-207ENST00000616552 CNTLNQ9NXG0 1405 aa12.82□□□□□ -0.36
MCM3-207ENST00000616552 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
MCM3-207ENST00000616552 NAIPQ13075 1403 aa12.82□□□□□ -0.36
MCM3-207ENST00000616552 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
MCM3-207ENST00000616552 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
MCM3-207ENST00000616552 BRPF3Q9ULD4 1205 aa12.81□□□□□ -0.36
MCM3-207ENST00000616552 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
MCM3-207ENST00000616552 EXOC6Q8TAG9 804 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms