RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 CENPBP07199 599 aaPredicted RBP20.41■□□□□ 0.86
CACNA1C-231ENST00000616390 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
CACNA1C-231ENST00000616390 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
CACNA1C-231ENST00000616390 TOPBP1Q92547 1522 aa20.39■□□□□ 0.85
CACNA1C-231ENST00000616390 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
CACNA1C-231ENST00000616390 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
CACNA1C-231ENST00000616390 BCL11AQ9H165 835 aa20.35■□□□□ 0.85
CACNA1C-231ENST00000616390 DAXXQ9UER7 740 aaPredicted RBP20.34■□□□□ 0.85
CACNA1C-231ENST00000616390 GTF3C3Q9Y5Q9 886 aa20.34■□□□□ 0.85
CACNA1C-231ENST00000616390 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
CACNA1C-231ENST00000616390 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
CACNA1C-231ENST00000616390 TIAM1Q13009 1591 aa20.32■□□□□ 0.84
CACNA1C-231ENST00000616390 ABCA10Q8WWZ4 1543 aa20.29■□□□□ 0.84
CACNA1C-231ENST00000616390 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
CACNA1C-231ENST00000616390 LRRC9Q6ZRR7 1453 aa20.27■□□□□ 0.84
CACNA1C-231ENST00000616390 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
CACNA1C-231ENST00000616390 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
CACNA1C-231ENST00000616390 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
CACNA1C-231ENST00000616390 RAB3GAP2Q9H2M9 1393 aa20.25■□□□□ 0.83
CACNA1C-231ENST00000616390 CLSPNQ9HAW4 1339 aa20.25■□□□□ 0.83
CACNA1C-231ENST00000616390 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
CACNA1C-231ENST00000616390 MAP3K1Q13233 1512 aa20.15■□□□□ 0.82
CACNA1C-231ENST00000616390 CUL7Q14999 1698 aa20.15■□□□□ 0.82
CACNA1C-231ENST00000616390 SIN3AQ96ST3 1273 aa20.15■□□□□ 0.82
CACNA1C-231ENST00000616390 PDS5BQ9NTI5 1447 aa20.15■□□□□ 0.82
CACNA1C-231ENST00000616390 CTTNBP2Q8WZ74 1663 aa20.14■□□□□ 0.81
CACNA1C-231ENST00000616390 SETD5Q9C0A6 1442 aa20.14■□□□□ 0.81
CACNA1C-231ENST00000616390 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
CACNA1C-231ENST00000616390 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
CACNA1C-231ENST00000616390 CFAP43Q8NDM7 1665 aa20.11■□□□□ 0.81
CACNA1C-231ENST00000616390 ARID3CA6NKF2 412 aa20.09■□□□□ 0.81
CACNA1C-231ENST00000616390 CASKIN1Q8WXD9 1431 aa20.09■□□□□ 0.81
CACNA1C-231ENST00000616390 FYCO1Q9BQS8 1478 aa20.08■□□□□ 0.81
CACNA1C-231ENST00000616390 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.8
CACNA1C-231ENST00000616390 EFCAB5A4FU69 1503 aa20.08■□□□□ 0.8
CACNA1C-231ENST00000616390 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
CACNA1C-231ENST00000616390 FMN1Q68DA7 1419 aa20.05■□□□□ 0.8
CACNA1C-231ENST00000616390 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
CACNA1C-231ENST00000616390 ABCA5Q8WWZ7 1642 aa20.04■□□□□ 0.8
CACNA1C-231ENST00000616390 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.79
CACNA1C-231ENST00000616390 HIRIP3Q9BW71 556 aaPredicted RBP20■□□□□ 0.79
CACNA1C-231ENST00000616390 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
CACNA1C-231ENST00000616390 FGD6Q6ZV73 1430 aa19.96■□□□□ 0.79
CACNA1C-231ENST00000616390 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
CACNA1C-231ENST00000616390 CHIC2Q9UKJ5 165 aa19.94■□□□□ 0.78
CACNA1C-231ENST00000616390 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
CACNA1C-231ENST00000616390 SAMD9Q5K651 1589 aa19.91■□□□□ 0.78
CACNA1C-231ENST00000616390 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
CACNA1C-231ENST00000616390 NCOA2Q15596 1464 aa19.89■□□□□ 0.78
CACNA1C-231ENST00000616390 PTPRKQ15262 1439 aa19.89■□□□□ 0.77
CACNA1C-231ENST00000616390 RRP7BPQ9NSQ0 103 aa19.89■□□□□ 0.77
CACNA1C-231ENST00000616390 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
CACNA1C-231ENST00000616390 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
CACNA1C-231ENST00000616390 PBRM1Q86U86 1689 aa19.86■□□□□ 0.77
CACNA1C-231ENST00000616390 CCDC18Q5T9S5 1454 aa19.84■□□□□ 0.77
CACNA1C-231ENST00000616390 MYOM3Q5VTT5 1437 aa19.83■□□□□ 0.77
CACNA1C-231ENST00000616390 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
CACNA1C-231ENST00000616390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.82■□□□□ 0.76
CACNA1C-231ENST00000616390 SUPT6HQ7KZ85 1726 aaKnown RBP19.82■□□□□ 0.76
CACNA1C-231ENST00000616390 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
CACNA1C-231ENST00000616390 PPP1R15AO75807 674 aaPredicted RBP19.81■□□□□ 0.76
CACNA1C-231ENST00000616390 MAGI3Q5TCQ9 1506 aa19.81■□□□□ 0.76
CACNA1C-231ENST00000616390 TRIM52Q96A61 297 aa19.8■□□□□ 0.76
CACNA1C-231ENST00000616390 TONSLQ96HA7 1378 aa19.8■□□□□ 0.76
CACNA1C-231ENST00000616390 IQGAP2Q13576 1575 aa19.79■□□□□ 0.76
CACNA1C-231ENST00000616390 FBLN2P98095 1184 aa19.79■□□□□ 0.76
CACNA1C-231ENST00000616390 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
CACNA1C-231ENST00000616390 EHBP1L1Q8N3D4 1523 aa19.77■□□□□ 0.75
CACNA1C-231ENST00000616390 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
CACNA1C-231ENST00000616390 HFM1A2PYH4 1435 aa19.75■□□□□ 0.75
CACNA1C-231ENST00000616390 ADAMTS12P58397 1594 aa19.75■□□□□ 0.75
CACNA1C-231ENST00000616390 NAIPQ13075 1403 aa19.75■□□□□ 0.75
CACNA1C-231ENST00000616390 EPRSP07814 1512 aaKnown RBP19.73■□□□□ 0.75
CACNA1C-231ENST00000616390 UACAQ9BZF9 1416 aa19.72■□□□□ 0.75
CACNA1C-231ENST00000616390 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
CACNA1C-231ENST00000616390 TIMELESSQ9UNS1 1208 aa19.71■□□□□ 0.75
CACNA1C-231ENST00000616390 HECW1Q76N89 1606 aa19.71■□□□□ 0.75
CACNA1C-231ENST00000616390 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
CACNA1C-231ENST00000616390 FOXD1Q16676 465 aa19.69■□□□□ 0.74
CACNA1C-231ENST00000616390 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
CACNA1C-231ENST00000616390 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
CACNA1C-231ENST00000616390 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
CACNA1C-231ENST00000616390 IFT140Q96RY7 1462 aa19.66■□□□□ 0.74
CACNA1C-231ENST00000616390 ZNF644Q9H582 1327 aaPredicted RBP19.65■□□□□ 0.74
CACNA1C-231ENST00000616390 WDR62O43379 1518 aa19.62■□□□□ 0.73
CACNA1C-231ENST00000616390 ARHGEF11O15085 1522 aa19.62■□□□□ 0.73
CACNA1C-231ENST00000616390 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
CACNA1C-231ENST00000616390 KDM6BO15054 1643 aa19.6■□□□□ 0.73
CACNA1C-231ENST00000616390 ANP32CO43423 234 aa19.6■□□□□ 0.73
CACNA1C-231ENST00000616390 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
CACNA1C-231ENST00000616390 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
CACNA1C-231ENST00000616390 KIAA0586Q9BVV6 1533 aa19.58■□□□□ 0.73
CACNA1C-231ENST00000616390 SUPT16HQ9Y5B9 1047 aaKnown RBP19.58■□□□□ 0.72
CACNA1C-231ENST00000616390 DISP1Q96F81 1524 aa19.58■□□□□ 0.72
CACNA1C-231ENST00000616390 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
CACNA1C-231ENST00000616390 TCOF1Q13428 1488 aaKnown RBP19.56■□□□□ 0.72
CACNA1C-231ENST00000616390 KIAA0556O60303 1618 aa19.55■□□□□ 0.72
CACNA1C-231ENST00000616390 CDK11AQ9UQ88 783 aaPredicted RBP19.55■□□□□ 0.72
CACNA1C-231ENST00000616390 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
CACNA1C-231ENST00000616390 MIA2Q96PC5 1412 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms