RNA–Protein interactions for RNA: ENST00000616255.1

UHRF1-204, Transcript of ubiquitin like with PHD and ring finger domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UHRF1, Length 2,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UHRF1-204ENST00000616255 RRBP1Q9P2E9 1410 aaKnown RBP20.59■□□□□ 0.89
UHRF1-204ENST00000616255 BIVM-ERCC5R4GMW8 1640 aa20.58■□□□□ 0.89
UHRF1-204ENST00000616255 MAPKBP1O60336 1514 aa20.53■□□□□ 0.88
UHRF1-204ENST00000616255 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
UHRF1-204ENST00000616255 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
UHRF1-204ENST00000616255 NOP58Q9Y2X3 529 aaKnown RBP20.51■□□□□ 0.87
UHRF1-204ENST00000616255 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
UHRF1-204ENST00000616255 IRX6P78412 446 aaPredicted RBP20.5■□□□□ 0.87
UHRF1-204ENST00000616255 NBR1Q14596 966 aa20.49■□□□□ 0.87
UHRF1-204ENST00000616255 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
UHRF1-204ENST00000616255 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
UHRF1-204ENST00000616255 PPP4R2Q9NY27 417 aa20.46■□□□□ 0.87
UHRF1-204ENST00000616255 CFTRP13569 1480 aa20.46■□□□□ 0.87
UHRF1-204ENST00000616255 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
UHRF1-204ENST00000616255 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
UHRF1-204ENST00000616255 HNRNPUQ00839 825 aaKnown RBP eCLIP20.4■□□□□ 0.86
UHRF1-204ENST00000616255 PRDM2Q13029 1718 aa20.39■□□□□ 0.85
UHRF1-204ENST00000616255 ERICH3Q5RHP9 1530 aa20.38■□□□□ 0.85
UHRF1-204ENST00000616255 RTL5Q5HYW3 569 aaPredicted RBP20.38■□□□□ 0.85
UHRF1-204ENST00000616255 PAK3O75914 559 aaPredicted RBP20.37■□□□□ 0.85
UHRF1-204ENST00000616255 CUX1P39880 1505 aa20.37■□□□□ 0.85
UHRF1-204ENST00000616255 HIRIP3Q9BW71 556 aaPredicted RBP20.36■□□□□ 0.85
UHRF1-204ENST00000616255 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
UHRF1-204ENST00000616255 CCDC136Q96JN2 1154 aa20.34■□□□□ 0.85
UHRF1-204ENST00000616255 SIN3AQ96ST3 1273 aa20.34■□□□□ 0.85
UHRF1-204ENST00000616255 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
UHRF1-204ENST00000616255 IL27Q8NEV9 243 aa20.31■□□□□ 0.84
UHRF1-204ENST00000616255 SETD5Q9C0A6 1442 aa20.3■□□□□ 0.84
UHRF1-204ENST00000616255 UBE2Q2Q8WVN8 375 aa20.3■□□□□ 0.84
UHRF1-204ENST00000616255 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
UHRF1-204ENST00000616255 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
UHRF1-204ENST00000616255 ANP32AP39687 249 aaKnown RBP20.24■□□□□ 0.83
UHRF1-204ENST00000616255 IPO9Q96P70 1041 aaKnown RBP20.23■□□□□ 0.83
UHRF1-204ENST00000616255 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
UHRF1-204ENST00000616255 RTN4Q9NQC3 1192 aaKnown RBP20.23■□□□□ 0.83
UHRF1-204ENST00000616255 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.2■□□□□ 0.82
UHRF1-204ENST00000616255 ZBTB47Q9UFB7 747 aaPredicted RBP20.2■□□□□ 0.82
UHRF1-204ENST00000616255 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
UHRF1-204ENST00000616255 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
UHRF1-204ENST00000616255 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
UHRF1-204ENST00000616255 C11orf95C9JLR9 678 aaPredicted RBP20.05■□□□□ 0.8
UHRF1-204ENST00000616255 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
UHRF1-204ENST00000616255 ZBED9Q6R2W3 1325 aa20.04■□□□□ 0.8
UHRF1-204ENST00000616255 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
UHRF1-204ENST00000616255 USP35Q9P2H5 1018 aa20.03■□□□□ 0.8
UHRF1-204ENST00000616255 FGD5Q6ZNL6 1462 aa20.03■□□□□ 0.8
UHRF1-204ENST00000616255 MAP3K1Q13233 1512 aa20.02■□□□□ 0.8
UHRF1-204ENST00000616255 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
UHRF1-204ENST00000616255 IGF1RP08069 1367 aa20.01■□□□□ 0.79
UHRF1-204ENST00000616255 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
UHRF1-204ENST00000616255 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
UHRF1-204ENST00000616255 WASHC2CQ9Y4E1 1318 aa20.01■□□□□ 0.79
UHRF1-204ENST00000616255 NEFMP07197 916 aa19.99■□□□□ 0.79
UHRF1-204ENST00000616255 PHLDB1Q86UU1 1377 aa19.98■□□□□ 0.79
UHRF1-204ENST00000616255 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
UHRF1-204ENST00000616255 CCDC184Q52MB2 194 aa19.97■□□□□ 0.79
UHRF1-204ENST00000616255 FAM9BQ8IZU0 186 aa19.97■□□□□ 0.79
UHRF1-204ENST00000616255 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
UHRF1-204ENST00000616255 CNTLNQ9NXG0 1405 aa19.92■□□□□ 0.78
UHRF1-204ENST00000616255 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
UHRF1-204ENST00000616255 LAS1LQ9Y4W2 734 aaKnown RBP19.92■□□□□ 0.78
UHRF1-204ENST00000616255 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
UHRF1-204ENST00000616255 MRS2Q9HD23 443 aa19.91■□□□□ 0.78
UHRF1-204ENST00000616255 NCOA2Q15596 1464 aa19.91■□□□□ 0.78
UHRF1-204ENST00000616255 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
UHRF1-204ENST00000616255 ABCA10Q8WWZ4 1543 aa19.89■□□□□ 0.77
UHRF1-204ENST00000616255 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
UHRF1-204ENST00000616255 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.77
UHRF1-204ENST00000616255 SLC24A1O60721 1099 aa19.89■□□□□ 0.77
UHRF1-204ENST00000616255 AKNAQ7Z591 1439 aa19.88■□□□□ 0.77
UHRF1-204ENST00000616255 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
UHRF1-204ENST00000616255 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
UHRF1-204ENST00000616255 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
UHRF1-204ENST00000616255 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
UHRF1-204ENST00000616255 NPM2Q86SE8 214 aaKnown RBP19.87■□□□□ 0.77
UHRF1-204ENST00000616255 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
UHRF1-204ENST00000616255 ATP1B4Q9UN42 357 aaPredicted RBP19.86■□□□□ 0.77
UHRF1-204ENST00000616255 RNF123Q5XPI4 1314 aa19.85■□□□□ 0.77
UHRF1-204ENST00000616255 KDM5BQ9UGL1 1544 aa19.83■□□□□ 0.77
UHRF1-204ENST00000616255 POLA1P09884 1462 aaPredicted RBP19.83■□□□□ 0.76
UHRF1-204ENST00000616255 NUDCQ9Y266 331 aa19.81■□□□□ 0.76
UHRF1-204ENST00000616255 CFAP43Q8NDM7 1665 aa19.81■□□□□ 0.76
UHRF1-204ENST00000616255 CCDC18Q5T9S5 1454 aa19.81■□□□□ 0.76
UHRF1-204ENST00000616255 UACAQ9BZF9 1416 aa19.81■□□□□ 0.76
UHRF1-204ENST00000616255 GSE1Q14687 1217 aa19.8■□□□□ 0.76
UHRF1-204ENST00000616255 CUL7Q14999 1698 aa19.8■□□□□ 0.76
UHRF1-204ENST00000616255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.8■□□□□ 0.76
UHRF1-204ENST00000616255 NESP48681 1621 aa19.79■□□□□ 0.76
UHRF1-204ENST00000616255 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
UHRF1-204ENST00000616255 TCERG1O14776 1098 aaKnown RBP19.77■□□□□ 0.76
UHRF1-204ENST00000616255 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
UHRF1-204ENST00000616255 RSPH6AQ9H0K4 717 aa19.76■□□□□ 0.75
UHRF1-204ENST00000616255 PKNOX2Q96KN3 472 aa19.75■□□□□ 0.75
UHRF1-204ENST00000616255 PDE4AP27815 886 aa19.73■□□□□ 0.75
UHRF1-204ENST00000616255 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
UHRF1-204ENST00000616255 CCDC7Q96M83 1385 aa19.73■□□□□ 0.75
UHRF1-204ENST00000616255 NCOA1Q15788 1441 aa19.72■□□□□ 0.75
UHRF1-204ENST00000616255 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
UHRF1-204ENST00000616255 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
UHRF1-204ENST00000616255 BACH2Q9BYV9 841 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms