RNA–Protein interactions for RNA: ENST00000615329.4

RPS6KC1-209, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-209ENST00000615329 TOP2BQ02880 1626 aa17.83■□□□□ 0.44
RPS6KC1-209ENST00000615329 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
RPS6KC1-209ENST00000615329 CUX1P39880 1505 aa17.81■□□□□ 0.44
RPS6KC1-209ENST00000615329 KIF21BO75037 1637 aa17.8■□□□□ 0.44
RPS6KC1-209ENST00000615329 CFTRP13569 1480 aa17.79■□□□□ 0.44
RPS6KC1-209ENST00000615329 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
RPS6KC1-209ENST00000615329 KIF27Q86VH2 1401 aa17.78■□□□□ 0.44
RPS6KC1-209ENST00000615329 BCL11AQ9H165 835 aa17.77■□□□□ 0.44
RPS6KC1-209ENST00000615329 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
RPS6KC1-209ENST00000615329 HNRNPUQ00839 825 aaKnown RBP eCLIP17.74■□□□□ 0.43
RPS6KC1-209ENST00000615329 RBM19Q9Y4C8 960 aaKnown RBP17.71■□□□□ 0.43
RPS6KC1-209ENST00000615329 CUX2O14529 1486 aa17.71■□□□□ 0.42
RPS6KC1-209ENST00000615329 PRXQ9BXM0 1461 aa17.7■□□□□ 0.42
RPS6KC1-209ENST00000615329 CCNB3Q8WWL7 1395 aa17.69■□□□□ 0.42
RPS6KC1-209ENST00000615329 SENP3-EIF4A1A0A087X0R7 540 aa17.69■□□□□ 0.42
RPS6KC1-209ENST00000615329 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
RPS6KC1-209ENST00000615329 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
RPS6KC1-209ENST00000615329 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
RPS6KC1-209ENST00000615329 RAB3GAP2Q9H2M9 1393 aa17.64■□□□□ 0.42
RPS6KC1-209ENST00000615329 IGF1RP08069 1367 aa17.64■□□□□ 0.41
RPS6KC1-209ENST00000615329 ANP32AP39687 249 aaKnown RBP17.64■□□□□ 0.41
RPS6KC1-209ENST00000615329 FAM9BQ8IZU0 186 aa17.64■□□□□ 0.41
RPS6KC1-209ENST00000615329 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
RPS6KC1-209ENST00000615329 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
RPS6KC1-209ENST00000615329 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
RPS6KC1-209ENST00000615329 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
RPS6KC1-209ENST00000615329 NESP48681 1621 aa17.59■□□□□ 0.41
RPS6KC1-209ENST00000615329 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
RPS6KC1-209ENST00000615329 ARID3CA6NKF2 412 aa17.57■□□□□ 0.4
RPS6KC1-209ENST00000615329 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
RPS6KC1-209ENST00000615329 ERICH3Q5RHP9 1530 aa17.56■□□□□ 0.4
RPS6KC1-209ENST00000615329 TONSLQ96HA7 1378 aa17.55■□□□□ 0.4
RPS6KC1-209ENST00000615329 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
RPS6KC1-209ENST00000615329 ARXQ96QS3 562 aa17.52■□□□□ 0.4
RPS6KC1-209ENST00000615329 RTN4Q9NQC3 1192 aaKnown RBP17.52■□□□□ 0.4
RPS6KC1-209ENST00000615329 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
RPS6KC1-209ENST00000615329 MYT1LQ9UL68 1186 aa17.51■□□□□ 0.39
RPS6KC1-209ENST00000615329 SETD5Q9C0A6 1442 aa17.48■□□□□ 0.39
RPS6KC1-209ENST00000615329 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
RPS6KC1-209ENST00000615329 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
RPS6KC1-209ENST00000615329 CHIC2Q9UKJ5 165 aa17.43■□□□□ 0.38
RPS6KC1-209ENST00000615329 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
RPS6KC1-209ENST00000615329 PPP1R15AO75807 674 aaPredicted RBP17.42■□□□□ 0.38
RPS6KC1-209ENST00000615329 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
RPS6KC1-209ENST00000615329 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
RPS6KC1-209ENST00000615329 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.38
RPS6KC1-209ENST00000615329 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
RPS6KC1-209ENST00000615329 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
RPS6KC1-209ENST00000615329 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
RPS6KC1-209ENST00000615329 FHOD3Q2V2M9 1422 aa17.36■□□□□ 0.37
RPS6KC1-209ENST00000615329 MSH5O43196 834 aa17.36■□□□□ 0.37
RPS6KC1-209ENST00000615329 RRP7BPQ9NSQ0 103 aa17.35■□□□□ 0.37
RPS6KC1-209ENST00000615329 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
RPS6KC1-209ENST00000615329 PHLDB1Q86UU1 1377 aa17.34■□□□□ 0.37
RPS6KC1-209ENST00000615329 PRDM2Q13029 1718 aa17.29■□□□□ 0.36
RPS6KC1-209ENST00000615329 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
RPS6KC1-209ENST00000615329 CANXP27824 592 aaKnown RBP17.27■□□□□ 0.36
RPS6KC1-209ENST00000615329 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
RPS6KC1-209ENST00000615329 URB2Q14146 1524 aaKnown RBP17.27■□□□□ 0.35
RPS6KC1-209ENST00000615329 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
RPS6KC1-209ENST00000615329 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
RPS6KC1-209ENST00000615329 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
RPS6KC1-209ENST00000615329 MAPKBP1O60336 1514 aa17.25■□□□□ 0.35
RPS6KC1-209ENST00000615329 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
RPS6KC1-209ENST00000615329 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
RPS6KC1-209ENST00000615329 FHAD1B1AJZ9 1412 aa17.24■□□□□ 0.35
RPS6KC1-209ENST00000615329 EIF4G2P78344 907 aaKnown RBP eCLIP17.24■□□□□ 0.35
RPS6KC1-209ENST00000615329 FOXD1Q16676 465 aa17.23■□□□□ 0.35
RPS6KC1-209ENST00000615329 TIMELESSQ9UNS1 1208 aa17.23■□□□□ 0.35
RPS6KC1-209ENST00000615329 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
RPS6KC1-209ENST00000615329 LRRC9Q6ZRR7 1453 aa17.22■□□□□ 0.35
RPS6KC1-209ENST00000615329 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
RPS6KC1-209ENST00000615329 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
RPS6KC1-209ENST00000615329 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
RPS6KC1-209ENST00000615329 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
RPS6KC1-209ENST00000615329 ZNF777Q9ULD5 760 aaPredicted RBP17.18■□□□□ 0.34
RPS6KC1-209ENST00000615329 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
RPS6KC1-209ENST00000615329 AQRO60306 1485 aaKnown RBP eCLIP17.14■□□□□ 0.332e-14■■■□□ 18.8
RPS6KC1-209ENST00000615329 FANCIQ9NVI1 1328 aa17.14■□□□□ 0.33
RPS6KC1-209ENST00000615329 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.33
RPS6KC1-209ENST00000615329 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
RPS6KC1-209ENST00000615329 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
RPS6KC1-209ENST00000615329 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.11■□□□□ 0.33
RPS6KC1-209ENST00000615329 FBLN2P98095 1184 aa17.1■□□□□ 0.33
RPS6KC1-209ENST00000615329 CCDC18Q5T9S5 1454 aa17.09■□□□□ 0.33
RPS6KC1-209ENST00000615329 FMN1Q68DA7 1419 aa17.08■□□□□ 0.33
RPS6KC1-209ENST00000615329 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.33
RPS6KC1-209ENST00000615329 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
RPS6KC1-209ENST00000615329 NEFMP07197 916 aa17.07■□□□□ 0.32
RPS6KC1-209ENST00000615329 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
RPS6KC1-209ENST00000615329 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
RPS6KC1-209ENST00000615329 MAP3K1Q13233 1512 aa17.04■□□□□ 0.32
RPS6KC1-209ENST00000615329 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
RPS6KC1-209ENST00000615329 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
RPS6KC1-209ENST00000615329 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-209ENST00000615329 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
RPS6KC1-209ENST00000615329 CUL7Q14999 1698 aa17.02■□□□□ 0.32
RPS6KC1-209ENST00000615329 EFCAB5A4FU69 1503 aa17■□□□□ 0.31
RPS6KC1-209ENST00000615329 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
RPS6KC1-209ENST00000615329 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms