RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 KANK4Q5T7N3 995 aaPredicted RBP14.37□□□□□ -0.11
RDM1-218ENST00000615288 SETD5Q9C0A6 1442 aa14.37□□□□□ -0.11
RDM1-218ENST00000615288 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
RDM1-218ENST00000615288 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
RDM1-218ENST00000615288 PCF11O94913 1555 aaKnown RBP14.35□□□□□ -0.11
RDM1-218ENST00000615288 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
RDM1-218ENST00000615288 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
RDM1-218ENST00000615288 RAB3GAP2Q9H2M9 1393 aa14.34□□□□□ -0.11
RDM1-218ENST00000615288 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
RDM1-218ENST00000615288 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.11
RDM1-218ENST00000615288 CTTNBP2Q8WZ74 1663 aa14.33□□□□□ -0.11
RDM1-218ENST00000615288 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
RDM1-218ENST00000615288 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
RDM1-218ENST00000615288 CASKIN1Q8WXD9 1431 aa14.32□□□□□ -0.12
RDM1-218ENST00000615288 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
RDM1-218ENST00000615288 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
RDM1-218ENST00000615288 SUPT16HQ9Y5B9 1047 aaKnown RBP14.25□□□□□ -0.13
RDM1-218ENST00000615288 PHLDB1Q86UU1 1377 aa14.24□□□□□ -0.13
RDM1-218ENST00000615288 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
RDM1-218ENST00000615288 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
RDM1-218ENST00000615288 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
RDM1-218ENST00000615288 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
RDM1-218ENST00000615288 HFM1A2PYH4 1435 aa14.19□□□□□ -0.14
RDM1-218ENST00000615288 AKNAQ7Z591 1439 aa14.19□□□□□ -0.14
RDM1-218ENST00000615288 EHBP1L1Q8N3D4 1523 aa14.19□□□□□ -0.14
RDM1-218ENST00000615288 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
RDM1-218ENST00000615288 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
RDM1-218ENST00000615288 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
RDM1-218ENST00000615288 UACAQ9BZF9 1416 aa14.16□□□□□ -0.14
RDM1-218ENST00000615288 PTPN23Q9H3S7 1636 aa14.16□□□□□ -0.14
RDM1-218ENST00000615288 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
RDM1-218ENST00000615288 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
RDM1-218ENST00000615288 RANGAP1P46060 587 aaPredicted RBP14.15□□□□□ -0.14
RDM1-218ENST00000615288 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
RDM1-218ENST00000615288 ARHGEF11O15085 1522 aa14.14□□□□□ -0.15
RDM1-218ENST00000615288 GCC2Q8IWJ2 1684 aa14.14□□□□□ -0.15
RDM1-218ENST00000615288 CCDC18Q5T9S5 1454 aa14.13□□□□□ -0.15
RDM1-218ENST00000615288 HECW1Q76N89 1606 aa14.13□□□□□ -0.15
RDM1-218ENST00000615288 GRIN2BQ13224 1484 aa14.12□□□□□ -0.15
RDM1-218ENST00000615288 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
RDM1-218ENST00000615288 TCOF1Q13428 1488 aaKnown RBP14.11□□□□□ -0.15
RDM1-218ENST00000615288 FHOD3Q2V2M9 1422 aa14.09□□□□□ -0.15
RDM1-218ENST00000615288 MYOM3Q5VTT5 1437 aa14.09□□□□□ -0.15
RDM1-218ENST00000615288 UGGT2Q9NYU1 1516 aa14.09□□□□□ -0.15
RDM1-218ENST00000615288 TSHZ2Q9NRE2 1034 aa14.04□□□□□ -0.16
RDM1-218ENST00000615288 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
RDM1-218ENST00000615288 NAIPQ13075 1403 aa14.04□□□□□ -0.16
RDM1-218ENST00000615288 NCOA2Q15596 1464 aa14.04□□□□□ -0.16
RDM1-218ENST00000615288 KDM5BQ9UGL1 1544 aa14.04□□□□□ -0.16
RDM1-218ENST00000615288 LRRIQ1Q96JM4 1722 aa14.04□□□□□ -0.16
RDM1-218ENST00000615288 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.17
RDM1-218ENST00000615288 FAM50AQ14320 339 aaKnown RBP14.02□□□□□ -0.17
RDM1-218ENST00000615288 MIA2Q96PC5 1412 aa14.01□□□□□ -0.17
RDM1-218ENST00000615288 ANP32CO43423 234 aa14.01□□□□□ -0.17
RDM1-218ENST00000615288 NEFLP07196 543 aa14.01□□□□□ -0.17
RDM1-218ENST00000615288 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
RDM1-218ENST00000615288 ITGAEP38570 1179 aa13.99□□□□□ -0.17
RDM1-218ENST00000615288 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
RDM1-218ENST00000615288 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
RDM1-218ENST00000615288 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
RDM1-218ENST00000615288 POLR1AO95602 1720 aaPredicted RBP13.96□□□□□ -0.17
RDM1-218ENST00000615288 ANP32EQ9BTT0 268 aa13.96□□□□□ -0.17
RDM1-218ENST00000615288 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
RDM1-218ENST00000615288 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
RDM1-218ENST00000615288 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
RDM1-218ENST00000615288 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
RDM1-218ENST00000615288 IQGAP2Q13576 1575 aa13.93□□□□□ -0.18
RDM1-218ENST00000615288 NESP48681 1621 aa13.93□□□□□ -0.18
RDM1-218ENST00000615288 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
RDM1-218ENST00000615288 WDR62O43379 1518 aa13.92□□□□□ -0.18
RDM1-218ENST00000615288 SIN3AQ96ST3 1273 aa13.92□□□□□ -0.18
RDM1-218ENST00000615288 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
RDM1-218ENST00000615288 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
RDM1-218ENST00000615288 MAGI3Q5TCQ9 1506 aa13.89□□□□□ -0.19
RDM1-218ENST00000615288 CNTLNQ9NXG0 1405 aa13.89□□□□□ -0.19
RDM1-218ENST00000615288 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
RDM1-218ENST00000615288 DNMT1P26358 1616 aaKnown RBP13.87□□□□□ -0.19
RDM1-218ENST00000615288 FKBP8Q14318 412 aa13.87□□□□□ -0.19
RDM1-218ENST00000615288 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
RDM1-218ENST00000615288 KCNH8Q96L42 1107 aa13.85□□□□□ -0.19
RDM1-218ENST00000615288 DENND4BO75064 1496 aaPredicted RBP13.85□□□□□ -0.19
RDM1-218ENST00000615288 RPRD2Q5VT52 1461 aaKnown RBP13.85□□□□□ -0.19
RDM1-218ENST00000615288 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
RDM1-218ENST00000615288 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
RDM1-218ENST00000615288 TEX14Q8IWB6 1497 aa13.81□□□□□ -0.2
RDM1-218ENST00000615288 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
RDM1-218ENST00000615288 P3H3Q8IVL6 736 aa13.8□□□□□ -0.2
RDM1-218ENST00000615288 ADCY10Q96PN6 1610 aa13.79□□□□□ -0.2
RDM1-218ENST00000615288 EIF4G2P78344 907 aaKnown RBP eCLIP13.78□□□□□ -0.2
RDM1-218ENST00000615288 KIAA0556O60303 1618 aa13.78□□□□□ -0.2
RDM1-218ENST00000615288 ADGRL2O95490 1459 aa13.77□□□□□ -0.21
RDM1-218ENST00000615288 DAPK1P53355 1430 aa13.77□□□□□ -0.21
RDM1-218ENST00000615288 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
RDM1-218ENST00000615288 ATP1B4Q9UN42 357 aaPredicted RBP13.77□□□□□ -0.21
RDM1-218ENST00000615288 CROCC2H7BZ55 1655 aa13.76□□□□□ -0.21
RDM1-218ENST00000615288 MBD5Q9P267 1494 aa13.76□□□□□ -0.21
RDM1-218ENST00000615288 KDM6BO15054 1643 aa13.75□□□□□ -0.21
RDM1-218ENST00000615288 KIF14Q15058 1648 aa13.75□□□□□ -0.21
RDM1-218ENST00000615288 SPATA31E1Q6ZUB1 1445 aa13.75□□□□□ -0.21
RDM1-218ENST00000615288 TDRD9Q8NDG6 1382 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms