RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 ABCA10Q8WWZ4 1543 aa21.76■■□□□ 1.07
POLR2E-213ENST00000615234 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
POLR2E-213ENST00000615234 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
POLR2E-213ENST00000615234 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
POLR2E-213ENST00000615234 ITGAEP38570 1179 aa21.74■■□□□ 1.07
POLR2E-213ENST00000615234 FHAD1B1AJZ9 1412 aa21.73■■□□□ 1.07
POLR2E-213ENST00000615234 LAMC3Q9Y6N6 1575 aa21.73■■□□□ 1.07
POLR2E-213ENST00000615234 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
POLR2E-213ENST00000615234 PCF11O94913 1555 aaKnown RBP21.7■■□□□ 1.06
POLR2E-213ENST00000615234 CFAP43Q8NDM7 1665 aa21.7■■□□□ 1.06
POLR2E-213ENST00000615234 PHLDB1Q86UU1 1377 aa21.69■■□□□ 1.06
POLR2E-213ENST00000615234 RAB3GAP2Q9H2M9 1393 aa21.68■■□□□ 1.06
POLR2E-213ENST00000615234 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
POLR2E-213ENST00000615234 P3H3Q8IVL6 736 aa21.67■■□□□ 1.06
POLR2E-213ENST00000615234 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
POLR2E-213ENST00000615234 CUL7Q14999 1698 aa21.65■■□□□ 1.06
POLR2E-213ENST00000615234 FHOD3Q2V2M9 1422 aa21.64■■□□□ 1.05
POLR2E-213ENST00000615234 EFCAB5A4FU69 1503 aa21.63■■□□□ 1.05
POLR2E-213ENST00000615234 MAPKBP1O60336 1514 aa21.62■■□□□ 1.05
POLR2E-213ENST00000615234 SETD5Q9C0A6 1442 aa21.61■■□□□ 1.05
POLR2E-213ENST00000615234 CTTNBP2Q8WZ74 1663 aa21.6■■□□□ 1.05
POLR2E-213ENST00000615234 FYCO1Q9BQS8 1478 aa21.6■■□□□ 1.05
POLR2E-213ENST00000615234 WDR97A6NE52 1622 aa21.58■■□□□ 1.05
POLR2E-213ENST00000615234 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.05
POLR2E-213ENST00000615234 CASKIN1Q8WXD9 1431 aa21.58■■□□□ 1.04
POLR2E-213ENST00000615234 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.042e-7■■■■□ 26
POLR2E-213ENST00000615234 ATP1B4Q9UN42 357 aaPredicted RBP21.56■■□□□ 1.04
POLR2E-213ENST00000615234 FAM50AQ14320 339 aaKnown RBP21.56■■□□□ 1.04
POLR2E-213ENST00000615234 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
POLR2E-213ENST00000615234 FMN1Q68DA7 1419 aa21.48■■□□□ 1.03
POLR2E-213ENST00000615234 TDRD9Q8NDG6 1382 aaKnown RBP21.47■■□□□ 1.03
POLR2E-213ENST00000615234 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
POLR2E-213ENST00000615234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.47■■□□□ 1.031e-6■■□□□ 13.7
POLR2E-213ENST00000615234 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
POLR2E-213ENST00000615234 SAMD9Q5K651 1589 aa21.44■■□□□ 1.02
POLR2E-213ENST00000615234 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
POLR2E-213ENST00000615234 SIN3AQ96ST3 1273 aa21.41■■□□□ 1.02
POLR2E-213ENST00000615234 FGD6Q6ZV73 1430 aa21.4■■□□□ 1.02
POLR2E-213ENST00000615234 LRRIQ1Q96JM4 1722 aa21.38■■□□□ 1.01
POLR2E-213ENST00000615234 THOC2Q8NI27 1593 aaKnown RBP21.36■■□□□ 1.01
POLR2E-213ENST00000615234 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
POLR2E-213ENST00000615234 GRIN2BQ13224 1484 aa21.35■■□□□ 1.01
POLR2E-213ENST00000615234 TIMELESSQ9UNS1 1208 aa21.33■■□□□ 1.01
POLR2E-213ENST00000615234 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1
POLR2E-213ENST00000615234 PTPRKQ15262 1439 aa21.3■■□□□ 1
POLR2E-213ENST00000615234 NCOA2Q15596 1464 aa21.29■■□□□ 1
POLR2E-213ENST00000615234 MYOM3Q5VTT5 1437 aa21.27■□□□□ 0.99
POLR2E-213ENST00000615234 WDR62O43379 1518 aa21.26■□□□□ 0.99
POLR2E-213ENST00000615234 CCDC18Q5T9S5 1454 aa21.26■□□□□ 0.99
POLR2E-213ENST00000615234 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
POLR2E-213ENST00000615234 SUPT6HQ7KZ85 1726 aaKnown RBP21.25■□□□□ 0.99
POLR2E-213ENST00000615234 EHBP1L1Q8N3D4 1523 aa21.25■□□□□ 0.99
POLR2E-213ENST00000615234 PPP1R15AO75807 674 aaPredicted RBP21.24■□□□□ 0.99
POLR2E-213ENST00000615234 PTPN23Q9H3S7 1636 aa21.24■□□□□ 0.99
POLR2E-213ENST00000615234 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
POLR2E-213ENST00000615234 UACAQ9BZF9 1416 aa21.21■□□□□ 0.99
POLR2E-213ENST00000615234 MAGI3Q5TCQ9 1506 aa21.21■□□□□ 0.99
POLR2E-213ENST00000615234 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
POLR2E-213ENST00000615234 UGGT2Q9NYU1 1516 aa21.2■□□□□ 0.98
POLR2E-213ENST00000615234 NAIPQ13075 1403 aa21.2■□□□□ 0.98
POLR2E-213ENST00000615234 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
POLR2E-213ENST00000615234 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
POLR2E-213ENST00000615234 ZNF608Q9ULD9 1512 aaPredicted RBP21.15■□□□□ 0.98
POLR2E-213ENST00000615234 ADAMTS12P58397 1594 aa21.15■□□□□ 0.98
POLR2E-213ENST00000615234 IQGAP2Q13576 1575 aa21.15■□□□□ 0.98
POLR2E-213ENST00000615234 HECW1Q76N89 1606 aa21.14■□□□□ 0.97
POLR2E-213ENST00000615234 TONSLQ96HA7 1378 aa21.13■□□□□ 0.97
POLR2E-213ENST00000615234 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
POLR2E-213ENST00000615234 SUPT16HQ9Y5B9 1047 aaKnown RBP21.11■□□□□ 0.97
POLR2E-213ENST00000615234 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
POLR2E-213ENST00000615234 EPRSP07814 1512 aaKnown RBP21.1■□□□□ 0.97
POLR2E-213ENST00000615234 CDK13Q14004 1512 aaKnown RBP21.05■□□□□ 0.96
POLR2E-213ENST00000615234 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
POLR2E-213ENST00000615234 KDM5BQ9UGL1 1544 aa21.04■□□□□ 0.96
POLR2E-213ENST00000615234 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
POLR2E-213ENST00000615234 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
POLR2E-213ENST00000615234 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
POLR2E-213ENST00000615234 AKNAQ7Z591 1439 aa21.01■□□□□ 0.95
POLR2E-213ENST00000615234 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
POLR2E-213ENST00000615234 DENND4BO75064 1496 aaPredicted RBP21■□□□□ 0.95
POLR2E-213ENST00000615234 KDM6BO15054 1643 aa20.98■□□□□ 0.95
POLR2E-213ENST00000615234 FBLN2P98095 1184 aa20.98■□□□□ 0.95
POLR2E-213ENST00000615234 CCER2I3L3R5 266 aa20.97■□□□□ 0.95
POLR2E-213ENST00000615234 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
POLR2E-213ENST00000615234 ANP32CO43423 234 aa20.96■□□□□ 0.95
POLR2E-213ENST00000615234 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
POLR2E-213ENST00000615234 DISP1Q96F81 1524 aa20.94■□□□□ 0.94
POLR2E-213ENST00000615234 KIAA0586Q9BVV6 1533 aa20.94■□□□□ 0.94
POLR2E-213ENST00000615234 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
POLR2E-213ENST00000615234 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
POLR2E-213ENST00000615234 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
POLR2E-213ENST00000615234 MPHOSPH9Q99550 1183 aa20.88■□□□□ 0.93
POLR2E-213ENST00000615234 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
POLR2E-213ENST00000615234 DAPK1P53355 1430 aa20.86■□□□□ 0.93
POLR2E-213ENST00000615234 RAPGEF6Q8TEU7 1601 aa20.85■□□□□ 0.93
POLR2E-213ENST00000615234 ROCK1Q13464 1354 aa20.85■□□□□ 0.93
POLR2E-213ENST00000615234 DNMT1P26358 1616 aaKnown RBP20.84■□□□□ 0.93
POLR2E-213ENST00000615234 ABCC5O15440 1437 aa20.83■□□□□ 0.93
POLR2E-213ENST00000615234 HSPA5P11021 654 aaKnown RBP20.81■□□□□ 0.92
POLR2E-213ENST00000615234 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms