RNA–Protein interactions for RNA: ENST00000614337.4

KNL1-213, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 3,211 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-213ENST00000614337 FANCD2Q9BXW9 1451 aa9.91□□□□□ -0.82
KNL1-213ENST00000614337 SYNJ1O43426 1573 aa9.91□□□□□ -0.82
KNL1-213ENST00000614337 NCBP3Q53F19 620 aaKnown RBP9.91□□□□□ -0.82
KNL1-213ENST00000614337 RAPGEF2Q9Y4G8 1499 aa9.91□□□□□ -0.82
KNL1-213ENST00000614337 CEP162Q5TB80 1403 aa9.9□□□□□ -0.82
KNL1-213ENST00000614337 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
KNL1-213ENST00000614337 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.89□□□□□ -0.83
KNL1-213ENST00000614337 KANK4Q5T7N3 995 aaPredicted RBP9.89□□□□□ -0.83
KNL1-213ENST00000614337 FKBP8Q14318 412 aa9.88□□□□□ -0.83
KNL1-213ENST00000614337 AQRO60306 1485 aaKnown RBP eCLIP9.87□□□□□ -0.831e-6■■■■□ 22.4
KNL1-213ENST00000614337 PKNOX2Q96KN3 472 aa9.85□□□□□ -0.83
KNL1-213ENST00000614337 CLIP1P30622 1438 aa9.85□□□□□ -0.83
KNL1-213ENST00000614337 NEFLP07196 543 aa9.84□□□□□ -0.83
KNL1-213ENST00000614337 CARMIL1Q5VZK9 1371 aa9.84□□□□□ -0.83
KNL1-213ENST00000614337 FGD5Q6ZNL6 1462 aa9.84□□□□□ -0.83
KNL1-213ENST00000614337 TIMELESSQ9UNS1 1208 aa9.83□□□□□ -0.84
KNL1-213ENST00000614337 CFTRP13569 1480 aa9.83□□□□□ -0.84
KNL1-213ENST00000614337 KIF27Q86VH2 1401 aa9.83□□□□□ -0.84
KNL1-213ENST00000614337 CUX1P39880 1505 aa9.83□□□□□ -0.84
KNL1-213ENST00000614337 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
KNL1-213ENST00000614337 CHIC2Q9UKJ5 165 aa9.82□□□□□ -0.84
KNL1-213ENST00000614337 FANCIQ9NVI1 1328 aa9.82□□□□□ -0.84
KNL1-213ENST00000614337 IGF1RP08069 1367 aa9.8□□□□□ -0.84
KNL1-213ENST00000614337 PDS5BQ9NTI5 1447 aa9.79□□□□□ -0.84
KNL1-213ENST00000614337 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
KNL1-213ENST00000614337 PLEKHG5O94827 1062 aa9.78□□□□□ -0.84
KNL1-213ENST00000614337 NBR1Q14596 966 aa9.78□□□□□ -0.84
KNL1-213ENST00000614337 GOLGA3Q08378 1498 aa9.77□□□□□ -0.84
KNL1-213ENST00000614337 CNGB1Q14028 1251 aaPredicted RBP9.77□□□□□ -0.85
KNL1-213ENST00000614337 KCNH8Q96L42 1107 aa9.77□□□□□ -0.85
KNL1-213ENST00000614337 TNIKQ9UKE5 1360 aa9.77□□□□□ -0.85
KNL1-213ENST00000614337 SENP3Q9H4L4 574 aaPredicted RBP9.77□□□□□ -0.85
KNL1-213ENST00000614337 PODXL2Q9NZ53 605 aa9.76□□□□□ -0.85
KNL1-213ENST00000614337 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
KNL1-213ENST00000614337 EEA1Q15075 1411 aa9.74□□□□□ -0.85
KNL1-213ENST00000614337 FHOD3Q2V2M9 1422 aa9.74□□□□□ -0.85
KNL1-213ENST00000614337 AMER1Q5JTC6 1135 aaPredicted RBP9.74□□□□□ -0.85
KNL1-213ENST00000614337 CDK11AQ9UQ88 783 aaPredicted RBP9.74□□□□□ -0.85
KNL1-213ENST00000614337 HMGXB3Q12766 1538 aa9.74□□□□□ -0.85
KNL1-213ENST00000614337 PEG3Q9GZU2 1588 aa9.73□□□□□ -0.85
KNL1-213ENST00000614337 ZNF608Q9ULD9 1512 aaPredicted RBP9.73□□□□□ -0.85
KNL1-213ENST00000614337 POLA1P09884 1462 aaPredicted RBP9.73□□□□□ -0.85
KNL1-213ENST00000614337 RTL5Q5HYW3 569 aaPredicted RBP9.73□□□□□ -0.85
KNL1-213ENST00000614337 URB2Q14146 1524 aaKnown RBP9.71□□□□□ -0.85
KNL1-213ENST00000614337 TOPBP1Q92547 1522 aa9.71□□□□□ -0.86
KNL1-213ENST00000614337 HIRIP3Q9BW71 556 aaPredicted RBP9.69□□□□□ -0.86
KNL1-213ENST00000614337 RRP7BPQ9NSQ0 103 aa9.69□□□□□ -0.86
KNL1-213ENST00000614337 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
KNL1-213ENST00000614337 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
KNL1-213ENST00000614337 GLIPR1L2Q4G1C9 344 aa9.65□□□□□ -0.86
KNL1-213ENST00000614337 NOP58Q9Y2X3 529 aaKnown RBP9.65□□□□□ -0.87
KNL1-213ENST00000614337 GAPVD1Q14C86 1478 aa9.64□□□□□ -0.87
KNL1-213ENST00000614337 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
KNL1-213ENST00000614337 ARAP1Q96P48 1450 aa9.62□□□□□ -0.87
KNL1-213ENST00000614337 KIF21BO75037 1637 aa9.62□□□□□ -0.87
KNL1-213ENST00000614337 TOP2BQ02880 1626 aa9.62□□□□□ -0.87
KNL1-213ENST00000614337 FOXD1Q16676 465 aa9.62□□□□□ -0.87
KNL1-213ENST00000614337 MTUS2Q5JR59 1369 aa9.61□□□□□ -0.87
KNL1-213ENST00000614337 ZNF326Q5BKZ1 582 aaKnown RBP9.6□□□□□ -0.87
KNL1-213ENST00000614337 ZNF644Q9H582 1327 aaPredicted RBP9.6□□□□□ -0.87
KNL1-213ENST00000614337 SIN3AQ96ST3 1273 aa9.59□□□□□ -0.87
KNL1-213ENST00000614337 POLR3GLQ9BT43 218 aa9.59□□□□□ -0.87
KNL1-213ENST00000614337 CYB5RLQ6IPT4 315 aa9.58□□□□□ -0.88
KNL1-213ENST00000614337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.58□□□□□ -0.88
KNL1-213ENST00000614337 VPS8Q8N3P4 1428 aa9.57□□□□□ -0.88
KNL1-213ENST00000614337 PRXQ9BXM0 1461 aa9.57□□□□□ -0.88
KNL1-213ENST00000614337 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
KNL1-213ENST00000614337 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
KNL1-213ENST00000614337 KIF21AQ7Z4S6 1674 aa9.55□□□□□ -0.88
KNL1-213ENST00000614337 MRC2Q9UBG0 1479 aa9.55□□□□□ -0.88
KNL1-213ENST00000614337 ZMYND15Q9H091 742 aa9.55□□□□□ -0.88
KNL1-213ENST00000614337 ARHGAP35Q9NRY4 1499 aa9.55□□□□□ -0.88
KNL1-213ENST00000614337 SNAPC4Q5SXM2 1469 aa9.54□□□□□ -0.88
KNL1-213ENST00000614337 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
KNL1-213ENST00000614337 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
KNL1-213ENST00000614337 SENP3-EIF4A1A0A087X0R7 540 aa9.52□□□□□ -0.89
KNL1-213ENST00000614337 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
KNL1-213ENST00000614337 KLHL34Q8N239 644 aa9.51□□□□□ -0.89
KNL1-213ENST00000614337 DNMBPQ6XZF7 1577 aa9.51□□□□□ -0.89
KNL1-213ENST00000614337 IRX6P78412 446 aaPredicted RBP9.51□□□□□ -0.89
KNL1-213ENST00000614337 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
KNL1-213ENST00000614337 TPRNQ4KMQ1 711 aa9.5□□□□□ -0.89
KNL1-213ENST00000614337 PLEKHD1A6NEE1 506 aa9.5□□□□□ -0.89
KNL1-213ENST00000614337 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
KNL1-213ENST00000614337 ANP32AP39687 249 aaKnown RBP9.49□□□□□ -0.89
KNL1-213ENST00000614337 CFDP1Q9UEE9 299 aaPredicted RBP9.49□□□□□ -0.89
KNL1-213ENST00000614337 HNRNPMP52272 730 aaKnown RBP eCLIP9.49□□□□□ -0.89
KNL1-213ENST00000614337 PHLDB1Q86UU1 1377 aa9.49□□□□□ -0.89
KNL1-213ENST00000614337 ABCA10Q8WWZ4 1543 aa9.47□□□□□ -0.89
KNL1-213ENST00000614337 C11orf95C9JLR9 678 aaPredicted RBP9.46□□□□□ -0.89
KNL1-213ENST00000614337 BRPF3Q9ULD4 1205 aa9.46□□□□□ -0.89
KNL1-213ENST00000614337 NEFMP07197 916 aa9.45□□□□□ -0.9
KNL1-213ENST00000614337 IPO9Q96P70 1041 aaKnown RBP9.45□□□□□ -0.9
KNL1-213ENST00000614337 GRIN2BQ13224 1484 aa9.45□□□□□ -0.9
KNL1-213ENST00000614337 A0A0U1RQG5 324 aaPredicted RBP9.45□□□□□ -0.9
KNL1-213ENST00000614337 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
KNL1-213ENST00000614337 KDM2AQ9Y2K7 1162 aa9.44□□□□□ -0.9
KNL1-213ENST00000614337 RGL3Q3MIN7 710 aa9.43□□□□□ -0.9
KNL1-213ENST00000614337 PPP4R2Q9NY27 417 aa9.43□□□□□ -0.9
KNL1-213ENST00000614337 BIVM-ERCC5R4GMW8 1640 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms