RNA–Protein interactions for RNA: ENST00000611708.1

AL513548.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL513548.3, Length 2,865 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL513548.3-201ENST00000611708 ARID3CA6NKF2 412 aa13.7□□□□□ -0.22
AL513548.3-201ENST00000611708 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
AL513548.3-201ENST00000611708 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
AL513548.3-201ENST00000611708 PHF23Q9BUL5 403 aaPredicted RBP13.67□□□□□ -0.22
AL513548.3-201ENST00000611708 FBLN2P98095 1184 aa13.67□□□□□ -0.22
AL513548.3-201ENST00000611708 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
AL513548.3-201ENST00000611708 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
AL513548.3-201ENST00000611708 ERCC6Q03468 1493 aa13.66□□□□□ -0.22
AL513548.3-201ENST00000611708 ZNF608Q9ULD9 1512 aaPredicted RBP13.61□□□□□ -0.23
AL513548.3-201ENST00000611708 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
AL513548.3-201ENST00000611708 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
AL513548.3-201ENST00000611708 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
AL513548.3-201ENST00000611708 TARBP1Q13395 1621 aaKnown RBP13.53□□□□□ -0.24
AL513548.3-201ENST00000611708 ABCA5Q8WWZ7 1642 aa13.52□□□□□ -0.24
AL513548.3-201ENST00000611708 SENP3Q9H4L4 574 aaPredicted RBP13.51□□□□□ -0.25
AL513548.3-201ENST00000611708 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
AL513548.3-201ENST00000611708 CHMP7Q8WUX9 453 aaPredicted RBP13.5□□□□□ -0.25
AL513548.3-201ENST00000611708 CUL7Q14999 1698 aa13.49□□□□□ -0.25
AL513548.3-201ENST00000611708 PCF11O94913 1555 aaKnown RBP13.48□□□□□ -0.25
AL513548.3-201ENST00000611708 PHLDB1Q86UU1 1377 aa13.48□□□□□ -0.25
AL513548.3-201ENST00000611708 CCNB3Q8WWL7 1395 aa13.47□□□□□ -0.25
AL513548.3-201ENST00000611708 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
AL513548.3-201ENST00000611708 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
AL513548.3-201ENST00000611708 TIAM1Q13009 1591 aa13.44□□□□□ -0.26
AL513548.3-201ENST00000611708 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
AL513548.3-201ENST00000611708 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
AL513548.3-201ENST00000611708 CTTNBP2Q8WZ74 1663 aa13.44□□□□□ -0.26
AL513548.3-201ENST00000611708 MTUS2Q5JR59 1369 aa13.43□□□□□ -0.26
AL513548.3-201ENST00000611708 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
AL513548.3-201ENST00000611708 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
AL513548.3-201ENST00000611708 WDR62O43379 1518 aa13.41□□□□□ -0.26
AL513548.3-201ENST00000611708 FMN1Q68DA7 1419 aa13.4□□□□□ -0.26
AL513548.3-201ENST00000611708 RRBP1Q9P2E9 1410 aaKnown RBP13.38□□□□□ -0.27
AL513548.3-201ENST00000611708 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
AL513548.3-201ENST00000611708 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
AL513548.3-201ENST00000611708 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
AL513548.3-201ENST00000611708 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
AL513548.3-201ENST00000611708 ADAMTS12P58397 1594 aa13.36□□□□□ -0.27
AL513548.3-201ENST00000611708 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
AL513548.3-201ENST00000611708 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
AL513548.3-201ENST00000611708 IQGAP2Q13576 1575 aa13.34□□□□□ -0.27
AL513548.3-201ENST00000611708 NEUROD1Q13562 356 aa13.34□□□□□ -0.27
AL513548.3-201ENST00000611708 DHX57Q6P158 1386 aaKnown RBP13.33□□□□□ -0.28
AL513548.3-201ENST00000611708 RAB3GAP2Q9H2M9 1393 aa13.33□□□□□ -0.28
AL513548.3-201ENST00000611708 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
AL513548.3-201ENST00000611708 GRIN2AQ12879 1464 aa13.31□□□□□ -0.28
AL513548.3-201ENST00000611708 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
AL513548.3-201ENST00000611708 CDK13Q14004 1512 aaKnown RBP13.31□□□□□ -0.28
AL513548.3-201ENST00000611708 SAMD9Q5K651 1589 aa13.3□□□□□ -0.28
AL513548.3-201ENST00000611708 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
AL513548.3-201ENST00000611708 RRP7BPQ9NSQ0 103 aa13.29□□□□□ -0.28
AL513548.3-201ENST00000611708 LRRIQ1Q96JM4 1722 aa13.28□□□□□ -0.28
AL513548.3-201ENST00000611708 CFAP43Q8NDM7 1665 aa13.26□□□□□ -0.29
AL513548.3-201ENST00000611708 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
AL513548.3-201ENST00000611708 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
AL513548.3-201ENST00000611708 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
AL513548.3-201ENST00000611708 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
AL513548.3-201ENST00000611708 MAGI3Q5TCQ9 1506 aa13.26□□□□□ -0.29
AL513548.3-201ENST00000611708 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
AL513548.3-201ENST00000611708 ZNF644Q9H582 1327 aaPredicted RBP13.25□□□□□ -0.29
AL513548.3-201ENST00000611708 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
AL513548.3-201ENST00000611708 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
AL513548.3-201ENST00000611708 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
AL513548.3-201ENST00000611708 SETD5Q9C0A6 1442 aa13.23□□□□□ -0.29
AL513548.3-201ENST00000611708 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
AL513548.3-201ENST00000611708 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
AL513548.3-201ENST00000611708 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
AL513548.3-201ENST00000611708 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
AL513548.3-201ENST00000611708 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
AL513548.3-201ENST00000611708 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.29
AL513548.3-201ENST00000611708 TRIM52Q96A61 297 aa13.19□□□□□ -0.3
AL513548.3-201ENST00000611708 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
AL513548.3-201ENST00000611708 MYOM3Q5VTT5 1437 aa13.19□□□□□ -0.3
AL513548.3-201ENST00000611708 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
AL513548.3-201ENST00000611708 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
AL513548.3-201ENST00000611708 KIAA0556O60303 1618 aa13.18□□□□□ -0.3
AL513548.3-201ENST00000611708 PRG4Q92954 1404 aaPredicted RBP13.17□□□□□ -0.3
AL513548.3-201ENST00000611708 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
AL513548.3-201ENST00000611708 FOXD1Q16676 465 aa13.16□□□□□ -0.3
AL513548.3-201ENST00000611708 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
AL513548.3-201ENST00000611708 HECW1Q76N89 1606 aa13.15□□□□□ -0.3
AL513548.3-201ENST00000611708 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
AL513548.3-201ENST00000611708 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
AL513548.3-201ENST00000611708 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
AL513548.3-201ENST00000611708 CCDC18Q5T9S5 1454 aa13.13□□□□□ -0.31
AL513548.3-201ENST00000611708 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
AL513548.3-201ENST00000611708 CFDP1Q9UEE9 299 aaPredicted RBP13.13□□□□□ -0.31
AL513548.3-201ENST00000611708 MIER1Q8N108 512 aa13.12□□□□□ -0.31
AL513548.3-201ENST00000611708 NUP160Q12769 1436 aa13.11□□□□□ -0.31
AL513548.3-201ENST00000611708 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
AL513548.3-201ENST00000611708 PLEKHD1A6NEE1 506 aa13.11□□□□□ -0.31
AL513548.3-201ENST00000611708 MAPKBP1O60336 1514 aa13.11□□□□□ -0.31
AL513548.3-201ENST00000611708 PTPN23Q9H3S7 1636 aa13.09□□□□□ -0.31
AL513548.3-201ENST00000611708 CLSPNQ9HAW4 1339 aa13.09□□□□□ -0.31
AL513548.3-201ENST00000611708 RAPGEF6Q8TEU7 1601 aa13.09□□□□□ -0.31
AL513548.3-201ENST00000611708 PTPRGP23470 1445 aa13.08□□□□□ -0.32
AL513548.3-201ENST00000611708 NAIPQ13075 1403 aa13.07□□□□□ -0.32
AL513548.3-201ENST00000611708 CHD1O14646 1710 aa13.05□□□□□ -0.32
AL513548.3-201ENST00000611708 HFM1A2PYH4 1435 aa13.04□□□□□ -0.32
AL513548.3-201ENST00000611708 ERCC6L2Q5T890 1561 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms