RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 GOLGA3Q08378 1498 aa25.45■■□□□ 1.66
GRIA3-205ENST00000611689 DNAJC5Q9H3Z4 198 aa25.43■■□□□ 1.66
GRIA3-205ENST00000611689 UBTFP17480 764 aaKnown RBP25.39■■□□□ 1.66
GRIA3-205ENST00000611689 JPH4Q96JJ6 628 aa25.39■■□□□ 1.66
GRIA3-205ENST00000611689 IQGAP2Q13576 1575 aa25.35■■□□□ 1.65
GRIA3-205ENST00000611689 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
GRIA3-205ENST00000611689 CTTNBP2Q8WZ74 1663 aa25.32■■□□□ 1.64
GRIA3-205ENST00000611689 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
GRIA3-205ENST00000611689 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
GRIA3-205ENST00000611689 ARHGEF11O15085 1522 aa25.25■■□□□ 1.63
GRIA3-205ENST00000611689 UGGT2Q9NYU1 1516 aa25.25■■□□□ 1.63
GRIA3-205ENST00000611689 TNIKQ9UKE5 1360 aa25.24■■□□□ 1.63
GRIA3-205ENST00000611689 ERCC6L2Q5T890 1561 aa25.21■■□□□ 1.63
GRIA3-205ENST00000611689 DISP1Q96F81 1524 aa25.18■■□□□ 1.62
GRIA3-205ENST00000611689 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
GRIA3-205ENST00000611689 RIMBP3CA6NJZ7 1639 aa25.18■■□□□ 1.62
GRIA3-205ENST00000611689 RIMBP3BA6NNM3 1639 aa25.18■■□□□ 1.62
GRIA3-205ENST00000611689 RIMBP3Q9UFD9 1639 aa25.18■■□□□ 1.62
GRIA3-205ENST00000611689 CARMIL2Q6F5E8 1435 aa25.18■■□□□ 1.62
GRIA3-205ENST00000611689 KIAA0556O60303 1618 aa25.1■■□□□ 1.61
GRIA3-205ENST00000611689 P3H3Q8IVL6 736 aa25.09■■□□□ 1.61
GRIA3-205ENST00000611689 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
GRIA3-205ENST00000611689 SAMD9Q5K651 1589 aa25.08■■□□□ 1.61
GRIA3-205ENST00000611689 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
GRIA3-205ENST00000611689 EFCAB5A4FU69 1503 aa25.05■■□□□ 1.6
GRIA3-205ENST00000611689 PTPRGP23470 1445 aa25.04■■□□□ 1.6
GRIA3-205ENST00000611689 ARHGAP35Q9NRY4 1499 aa25.02■■□□□ 1.6
GRIA3-205ENST00000611689 TTBK1Q5TCY1 1321 aaPredicted RBP25.02■■□□□ 1.6
GRIA3-205ENST00000611689 CLIP1P30622 1438 aa25.02■■□□□ 1.6
GRIA3-205ENST00000611689 CEP162Q5TB80 1403 aa25■■□□□ 1.59
GRIA3-205ENST00000611689 FHOD3Q2V2M9 1422 aa24.99■■□□□ 1.59
GRIA3-205ENST00000611689 UACAQ9BZF9 1416 aa24.87■■□□□ 1.57
GRIA3-205ENST00000611689 PLB1Q6P1J6 1458 aa24.85■■□□□ 1.57
GRIA3-205ENST00000611689 FMN1Q68DA7 1419 aa24.84■■□□□ 1.57
GRIA3-205ENST00000611689 ABCA8O94911 1581 aa24.82■■□□□ 1.56
GRIA3-205ENST00000611689 UHRF1BP1LA0JNW5 1464 aa24.82■■□□□ 1.56
GRIA3-205ENST00000611689 ABCC2Q92887 1545 aa24.79■■□□□ 1.56
GRIA3-205ENST00000611689 ADCY10Q96PN6 1610 aa24.79■■□□□ 1.56
GRIA3-205ENST00000611689 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
GRIA3-205ENST00000611689 NPM1P06748 294 aaKnown RBP eCLIP24.73■■□□□ 1.55
GRIA3-205ENST00000611689 NUP153P49790 1475 aaKnown RBP24.7■■□□□ 1.55
GRIA3-205ENST00000611689 CASKIN1Q8WXD9 1431 aa24.7■■□□□ 1.55
GRIA3-205ENST00000611689 ATP1B4Q9UN42 357 aaPredicted RBP24.7■■□□□ 1.54
GRIA3-205ENST00000611689 KDM5BQ9UGL1 1544 aa24.7■■□□□ 1.54
GRIA3-205ENST00000611689 ARID3CA6NKF2 412 aa24.67■■□□□ 1.54
GRIA3-205ENST00000611689 VPS8Q8N3P4 1428 aa24.67■■□□□ 1.54
GRIA3-205ENST00000611689 ATP10BO94823 1461 aa24.65■■□□□ 1.54
GRIA3-205ENST00000611689 PCF11O94913 1555 aaKnown RBP24.65■■□□□ 1.54
GRIA3-205ENST00000611689 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
GRIA3-205ENST00000611689 HECW1Q76N89 1606 aa24.63■■□□□ 1.53
GRIA3-205ENST00000611689 ZCCHC11Q5TAX3 1644 aaKnown RBP24.61■■□□□ 1.53
GRIA3-205ENST00000611689 EPRSP07814 1512 aaKnown RBP24.6■■□□□ 1.53
GRIA3-205ENST00000611689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.59■■□□□ 1.53
GRIA3-205ENST00000611689 HNRNPUL2Q1KMD3 747 aaKnown RBP24.59■■□□□ 1.53
GRIA3-205ENST00000611689 MAPKBP1O60336 1514 aa24.56■■□□□ 1.52
GRIA3-205ENST00000611689 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
GRIA3-205ENST00000611689 ASXL2Q76L83 1435 aa24.55■■□□□ 1.52
GRIA3-205ENST00000611689 CCDC18Q5T9S5 1454 aa24.53■■□□□ 1.52
GRIA3-205ENST00000611689 LRRIQ1Q96JM4 1722 aa24.5■■□□□ 1.51
GRIA3-205ENST00000611689 PLEKHD1A6NEE1 506 aa24.49■■□□□ 1.51
GRIA3-205ENST00000611689 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
GRIA3-205ENST00000611689 WDR7Q9Y4E6 1490 aa24.48■■□□□ 1.51
GRIA3-205ENST00000611689 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
GRIA3-205ENST00000611689 ABCC10Q5T3U5 1492 aa24.42■■□□□ 1.5
GRIA3-205ENST00000611689 APLP2Q06481 763 aa24.4■■□□□ 1.5
GRIA3-205ENST00000611689 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
GRIA3-205ENST00000611689 TROQ12816 1431 aaPredicted RBP24.39■■□□□ 1.5
GRIA3-205ENST00000611689 TIAM1Q13009 1591 aa24.38■■□□□ 1.49
GRIA3-205ENST00000611689 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
GRIA3-205ENST00000611689 FAM69CQ0P6D2 419 aa24.38■■□□□ 1.49
GRIA3-205ENST00000611689 MAGI3Q5TCQ9 1506 aa24.38■■□□□ 1.49
GRIA3-205ENST00000611689 DIP2BQ9P265 1576 aa24.36■■□□□ 1.49
GRIA3-205ENST00000611689 CFAP43Q8NDM7 1665 aa24.35■■□□□ 1.49
GRIA3-205ENST00000611689 MTUS2Q5JR59 1369 aa24.34■■□□□ 1.49
GRIA3-205ENST00000611689 KANK4Q5T7N3 995 aaPredicted RBP24.33■■□□□ 1.49
GRIA3-205ENST00000611689 GLI2P10070 1586 aa24.33■■□□□ 1.48
GRIA3-205ENST00000611689 LRRC9Q6ZRR7 1453 aa24.31■■□□□ 1.48
GRIA3-205ENST00000611689 EHBP1L1Q8N3D4 1523 aa24.28■■□□□ 1.48
GRIA3-205ENST00000611689 KIF13AQ9H1H9 1805 aa24.27■■□□□ 1.48
GRIA3-205ENST00000611689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.25■■□□□ 1.47
GRIA3-205ENST00000611689 KIF14Q15058 1648 aa24.25■■□□□ 1.47
GRIA3-205ENST00000611689 ABCA9Q8IUA7 1624 aa24.24■■□□□ 1.47
GRIA3-205ENST00000611689 CD109Q6YHK3 1445 aa24.23■■□□□ 1.47
GRIA3-205ENST00000611689 MAP3K4Q9Y6R4 1608 aa24.21■■□□□ 1.47
GRIA3-205ENST00000611689 TTC37Q6PGP7 1564 aa24.2■■□□□ 1.46
GRIA3-205ENST00000611689 NCOA2Q15596 1464 aa24.18■■□□□ 1.46
GRIA3-205ENST00000611689 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
GRIA3-205ENST00000611689 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
GRIA3-205ENST00000611689 PLCH2O75038 1416 aa24.14■■□□□ 1.45
GRIA3-205ENST00000611689 CCNB3Q8WWL7 1395 aa24.14■■□□□ 1.45
GRIA3-205ENST00000611689 GPATCH8Q9UKJ3 1502 aaKnown RBP24.11■■□□□ 1.45
GRIA3-205ENST00000611689 PPRC1Q5VV67 1664 aaKnown RBP24.09■■□□□ 1.45
GRIA3-205ENST00000611689 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
GRIA3-205ENST00000611689 TEX14Q8IWB6 1497 aa24.08■■□□□ 1.45
GRIA3-205ENST00000611689 ARAP3Q8WWN8 1544 aa24.07■■□□□ 1.44
GRIA3-205ENST00000611689 EFCAB2Q5VUJ9 269 aa24.07■■□□□ 1.44
GRIA3-205ENST00000611689 MYO5CQ9NQX4 1742 aa24.06■■□□□ 1.44
GRIA3-205ENST00000611689 PHLDB1Q86UU1 1377 aa24.05■■□□□ 1.44
GRIA3-205ENST00000611689 CFDP1Q9UEE9 299 aaPredicted RBP24.05■■□□□ 1.44
GRIA3-205ENST00000611689 PREX2Q70Z35 1606 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms