RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 VPS8Q8N3P4 1428 aa14.76□□□□□ -0.05
CTCFL-222ENST00000609232 PRKCSHP14314 528 aaPredicted RBP14.75□□□□□ -0.05
CTCFL-222ENST00000609232 AQRO60306 1485 aaKnown RBP eCLIP14.74□□□□□ -0.053e-6■■■□□ 17.6
CTCFL-222ENST00000609232 FAM50AQ14320 339 aaKnown RBP14.7□□□□□ -0.06
CTCFL-222ENST00000609232 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
CTCFL-222ENST00000609232 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
CTCFL-222ENST00000609232 ARHGAP35Q9NRY4 1499 aa14.64□□□□□ -0.07
CTCFL-222ENST00000609232 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
CTCFL-222ENST00000609232 CHMP7Q8WUX9 453 aaPredicted RBP14.64□□□□□ -0.07
CTCFL-222ENST00000609232 NEUROD1Q13562 356 aa14.63□□□□□ -0.07
CTCFL-222ENST00000609232 ZEB1P37275 1124 aaPredicted RBP14.63□□□□□ -0.07
CTCFL-222ENST00000609232 KANK4Q5T7N3 995 aaPredicted RBP14.63□□□□□ -0.07
CTCFL-222ENST00000609232 IFT140Q96RY7 1462 aa14.62□□□□□ -0.07
CTCFL-222ENST00000609232 FHOD3Q2V2M9 1422 aa14.6□□□□□ -0.07
CTCFL-222ENST00000609232 HIRIP3Q9BW71 556 aaPredicted RBP14.6□□□□□ -0.07
CTCFL-222ENST00000609232 CUL7Q14999 1698 aa14.59□□□□□ -0.07
CTCFL-222ENST00000609232 TARBP1Q13395 1621 aaKnown RBP14.59□□□□□ -0.07
CTCFL-222ENST00000609232 GRIN2BQ13224 1484 aa14.59□□□□□ -0.07
CTCFL-222ENST00000609232 WDR62O43379 1518 aa14.58□□□□□ -0.08
CTCFL-222ENST00000609232 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
CTCFL-222ENST00000609232 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
CTCFL-222ENST00000609232 WDR97A6NE52 1622 aa14.55□□□□□ -0.08
CTCFL-222ENST00000609232 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
CTCFL-222ENST00000609232 POLR3GLQ9BT43 218 aa14.49□□□□□ -0.09
CTCFL-222ENST00000609232 CHIC2Q9UKJ5 165 aa14.49□□□□□ -0.09
CTCFL-222ENST00000609232 THOC2Q8NI27 1593 aaKnown RBP14.48□□□□□ -0.09
CTCFL-222ENST00000609232 PBRM1Q86U86 1689 aa14.47□□□□□ -0.09
CTCFL-222ENST00000609232 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
CTCFL-222ENST00000609232 EIF4G3O43432 1585 aaKnown RBP14.45□□□□□ -0.1
CTCFL-222ENST00000609232 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
CTCFL-222ENST00000609232 SENP3-EIF4A1A0A087X0R7 540 aa14.44□□□□□ -0.1
CTCFL-222ENST00000609232 CTTNBP2Q8WZ74 1663 aa14.44□□□□□ -0.1
CTCFL-222ENST00000609232 ADAMTS12P58397 1594 aa14.44□□□□□ -0.1
CTCFL-222ENST00000609232 EFCAB5A4FU69 1503 aa14.43□□□□□ -0.1
CTCFL-222ENST00000609232 MTUS2Q5JR59 1369 aa14.43□□□□□ -0.1
CTCFL-222ENST00000609232 DIEXFQ68CQ4 756 aaKnown RBP14.42□□□□□ -0.1
CTCFL-222ENST00000609232 ZNF777Q9ULD5 760 aaPredicted RBP14.42□□□□□ -0.1
CTCFL-222ENST00000609232 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
CTCFL-222ENST00000609232 PCF11O94913 1555 aaKnown RBP14.39□□□□□ -0.11
CTCFL-222ENST00000609232 JPH4Q96JJ6 628 aa14.39□□□□□ -0.11
CTCFL-222ENST00000609232 IQGAP2Q13576 1575 aa14.39□□□□□ -0.11
CTCFL-222ENST00000609232 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
CTCFL-222ENST00000609232 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
CTCFL-222ENST00000609232 CCNB3Q8WWL7 1395 aa14.37□□□□□ -0.11
CTCFL-222ENST00000609232 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
CTCFL-222ENST00000609232 TIAM1Q13009 1591 aa14.36□□□□□ -0.11
CTCFL-222ENST00000609232 LRRC9Q6ZRR7 1453 aa14.36□□□□□ -0.11
CTCFL-222ENST00000609232 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
CTCFL-222ENST00000609232 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
CTCFL-222ENST00000609232 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
CTCFL-222ENST00000609232 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
CTCFL-222ENST00000609232 TRIM52Q96A61 297 aa14.35□□□□□ -0.11
CTCFL-222ENST00000609232 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
CTCFL-222ENST00000609232 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
CTCFL-222ENST00000609232 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-222ENST00000609232 GTF3C3Q9Y5Q9 886 aa14.33□□□□□ -0.12
CTCFL-222ENST00000609232 PHLDB1Q86UU1 1377 aa14.31□□□□□ -0.12
CTCFL-222ENST00000609232 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
CTCFL-222ENST00000609232 CARMIL2Q6F5E8 1435 aa14.3□□□□□ -0.12
CTCFL-222ENST00000609232 CDK11AQ9UQ88 783 aaPredicted RBP14.29□□□□□ -0.12
CTCFL-222ENST00000609232 SAMD9Q5K651 1589 aa14.28□□□□□ -0.12
CTCFL-222ENST00000609232 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.13
CTCFL-222ENST00000609232 MAP3K1Q13233 1512 aa14.27□□□□□ -0.13
CTCFL-222ENST00000609232 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
CTCFL-222ENST00000609232 RRBP1Q9P2E9 1410 aaKnown RBP14.26□□□□□ -0.13
CTCFL-222ENST00000609232 BCL11AQ9H165 835 aa14.25□□□□□ -0.13
CTCFL-222ENST00000609232 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
CTCFL-222ENST00000609232 UGGT2Q9NYU1 1516 aa14.24□□□□□ -0.13
CTCFL-222ENST00000609232 DISP1Q96F81 1524 aa14.22□□□□□ -0.13
CTCFL-222ENST00000609232 CDK13Q14004 1512 aaKnown RBP14.22□□□□□ -0.13
CTCFL-222ENST00000609232 NUP160Q12769 1436 aa14.21□□□□□ -0.13
CTCFL-222ENST00000609232 PRG4Q92954 1404 aaPredicted RBP14.2□□□□□ -0.14
CTCFL-222ENST00000609232 FOXD1Q16676 465 aa14.2□□□□□ -0.14
CTCFL-222ENST00000609232 EPRSP07814 1512 aaKnown RBP14.2□□□□□ -0.14
CTCFL-222ENST00000609232 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
CTCFL-222ENST00000609232 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
CTCFL-222ENST00000609232 CFAP43Q8NDM7 1665 aa14.19□□□□□ -0.14
CTCFL-222ENST00000609232 NCOA2Q15596 1464 aa14.19□□□□□ -0.14
CTCFL-222ENST00000609232 PLEKHD1A6NEE1 506 aa14.19□□□□□ -0.14
CTCFL-222ENST00000609232 PLB1Q6P1J6 1458 aa14.19□□□□□ -0.14
CTCFL-222ENST00000609232 HECW1Q76N89 1606 aa14.19□□□□□ -0.14
CTCFL-222ENST00000609232 PTPRGP23470 1445 aa14.18□□□□□ -0.14
CTCFL-222ENST00000609232 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
CTCFL-222ENST00000609232 MIER1Q8N108 512 aa14.17□□□□□ -0.14
CTCFL-222ENST00000609232 FGD6Q6ZV73 1430 aa14.16□□□□□ -0.14
CTCFL-222ENST00000609232 BCANQ96GW7 911 aa14.15□□□□□ -0.14
CTCFL-222ENST00000609232 RAB3GAP2Q9H2M9 1393 aa14.15□□□□□ -0.14
CTCFL-222ENST00000609232 MYOM3Q5VTT5 1437 aa14.14□□□□□ -0.15
CTCFL-222ENST00000609232 EHBP1L1Q8N3D4 1523 aa14.13□□□□□ -0.15
CTCFL-222ENST00000609232 DDX10Q13206 875 aaKnown RBP14.13□□□□□ -0.15
CTCFL-222ENST00000609232 CFDP1Q9UEE9 299 aaPredicted RBP14.12□□□□□ -0.15
CTCFL-222ENST00000609232 SETD5Q9C0A6 1442 aa14.12□□□□□ -0.15
CTCFL-222ENST00000609232 NUP153P49790 1475 aaKnown RBP14.12□□□□□ -0.15
CTCFL-222ENST00000609232 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
CTCFL-222ENST00000609232 PLPPR3Q6T4P5 718 aa14.11□□□□□ -0.15
CTCFL-222ENST00000609232 SUPT6HQ7KZ85 1726 aaKnown RBP14.1□□□□□ -0.15
CTCFL-222ENST00000609232 CHD1O14646 1710 aa14.1□□□□□ -0.15
CTCFL-222ENST00000609232 RAPGEF6Q8TEU7 1601 aa14.1□□□□□ -0.15
CTCFL-222ENST00000609232 DHX57Q6P158 1386 aaKnown RBP14.1□□□□□ -0.15
CTCFL-222ENST00000609232 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms