RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 GOLGA3Q08378 1498 aa35.43■■■■□ 3.26
NECAB3-221ENST00000607055 KIAA0586Q9BVV6 1533 aa35.37■■■■□ 3.25
NECAB3-221ENST00000607055 UBTFP17480 764 aaKnown RBP35.32■■■■□ 3.24
NECAB3-221ENST00000607055 CTTNBP2Q8WZ74 1663 aa35.3■■■■□ 3.24
NECAB3-221ENST00000607055 IQGAP2Q13576 1575 aa35.27■■■■□ 3.24
NECAB3-221ENST00000607055 JPH4Q96JJ6 628 aa35.22■■■■□ 3.23
NECAB3-221ENST00000607055 LOC105371045A0A1W2PR82 267 aa35.19■■■■□ 3.22
NECAB3-221ENST00000607055 SHROOM2Q13796 1616 aa35.19■■■■□ 3.22
NECAB3-221ENST00000607055 PRG4Q92954 1404 aaPredicted RBP35.12■■■■□ 3.21
NECAB3-221ENST00000607055 RANGAP1P46060 587 aaPredicted RBP35.09■■■■□ 3.21
NECAB3-221ENST00000607055 UGGT2Q9NYU1 1516 aa35.09■■■■□ 3.21
NECAB3-221ENST00000607055 TNIKQ9UKE5 1360 aa35.08■■■■□ 3.21
NECAB3-221ENST00000607055 ARHGEF11O15085 1522 aa35.06■■■■□ 3.2
NECAB3-221ENST00000607055 ERCC6L2Q5T890 1561 aa35.05■■■■□ 3.2
NECAB3-221ENST00000607055 RIMBP3CA6NJZ7 1639 aa35■■■■□ 3.19
NECAB3-221ENST00000607055 RIMBP3BA6NNM3 1639 aa35■■■■□ 3.19
NECAB3-221ENST00000607055 RIMBP3Q9UFD9 1639 aa35■■■■□ 3.19
NECAB3-221ENST00000607055 CARMIL2Q6F5E8 1435 aa34.99■■■■□ 3.19
NECAB3-221ENST00000607055 DISP1Q96F81 1524 aa34.98■■■■□ 3.19
NECAB3-221ENST00000607055 KIAA0556O60303 1618 aa34.93■■■■□ 3.18
NECAB3-221ENST00000607055 SAMD9Q5K651 1589 aa34.89■■■■□ 3.18
NECAB3-221ENST00000607055 P3H3Q8IVL6 736 aa34.89■■■■□ 3.18
NECAB3-221ENST00000607055 EFCAB5A4FU69 1503 aa34.86■■■■□ 3.17
NECAB3-221ENST00000607055 ARAP1Q96P48 1450 aa34.84■■■■□ 3.17
NECAB3-221ENST00000607055 TTBK1Q5TCY1 1321 aaPredicted RBP34.83■■■■□ 3.17
NECAB3-221ENST00000607055 CLIP1P30622 1438 aa34.82■■■■□ 3.17
NECAB3-221ENST00000607055 ARHGAP35Q9NRY4 1499 aa34.81■■■■□ 3.16
NECAB3-221ENST00000607055 CEP162Q5TB80 1403 aa34.81■■■■□ 3.16
NECAB3-221ENST00000607055 PTPRGP23470 1445 aa34.78■■■■□ 3.16
NECAB3-221ENST00000607055 FHOD3Q2V2M9 1422 aa34.78■■■■□ 3.16
NECAB3-221ENST00000607055 CYB5RLQ6IPT4 315 aa34.75■■■■□ 3.15
NECAB3-221ENST00000607055 PLB1Q6P1J6 1458 aa34.55■■■■□ 3.12
NECAB3-221ENST00000607055 UACAQ9BZF9 1416 aa34.55■■■■□ 3.12
NECAB3-221ENST00000607055 FMN1Q68DA7 1419 aa34.54■■■■□ 3.12
NECAB3-221ENST00000607055 ABCA8O94911 1581 aa34.5■■■■□ 3.11
NECAB3-221ENST00000607055 ADCY10Q96PN6 1610 aa34.48■■■■□ 3.11
NECAB3-221ENST00000607055 ABCC2Q92887 1545 aa34.47■■■■□ 3.11
NECAB3-221ENST00000607055 UHRF1BP1LA0JNW5 1464 aa34.46■■■■□ 3.11
NECAB3-221ENST00000607055 RAPGEF6Q8TEU7 1601 aa34.45■■■■□ 3.11
NECAB3-221ENST00000607055 ATP1B4Q9UN42 357 aaPredicted RBP34.38■■■■□ 3.09
NECAB3-221ENST00000607055 PCF11O94913 1555 aaKnown RBP34.36■■■■□ 3.09
NECAB3-221ENST00000607055 ARID3CA6NKF2 412 aa34.35■■■■□ 3.09
NECAB3-221ENST00000607055 VPS8Q8N3P4 1428 aa34.34■■■■□ 3.09
NECAB3-221ENST00000607055 CASKIN1Q8WXD9 1431 aa34.34■■■■□ 3.09
NECAB3-221ENST00000607055 NUP153P49790 1475 aaKnown RBP34.33■■■■□ 3.09
NECAB3-221ENST00000607055 NPM1P06748 294 aaKnown RBP eCLIP34.33■■■■□ 3.09
NECAB3-221ENST00000607055 HECW1Q76N89 1606 aa34.31■■■■□ 3.08
NECAB3-221ENST00000607055 KDM5BQ9UGL1 1544 aa34.3■■■■□ 3.08
NECAB3-221ENST00000607055 FYCO1Q9BQS8 1478 aa34.29■■■■□ 3.08
NECAB3-221ENST00000607055 ZCCHC11Q5TAX3 1644 aaKnown RBP34.24■■■■□ 3.07
NECAB3-221ENST00000607055 ATP10BO94823 1461 aa34.24■■■■□ 3.07
NECAB3-221ENST00000607055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.22■■■■□ 3.07
NECAB3-221ENST00000607055 HNRNPUL2Q1KMD3 747 aaKnown RBP34.22■■■■□ 3.07
NECAB3-221ENST00000607055 EPRSP07814 1512 aaKnown RBP34.2■■■■□ 3.07
NECAB3-221ENST00000607055 CDK13Q14004 1512 aaKnown RBP34.19■■■■□ 3.06
NECAB3-221ENST00000607055 LRRIQ1Q96JM4 1722 aa34.15■■■■□ 3.06
NECAB3-221ENST00000607055 CCDC18Q5T9S5 1454 aa34.14■■■■□ 3.06
NECAB3-221ENST00000607055 MAPKBP1O60336 1514 aa34.11■■■■□ 3.05
NECAB3-221ENST00000607055 ASXL2Q76L83 1435 aa34.11■■■■□ 3.05
NECAB3-221ENST00000607055 WDR7Q9Y4E6 1490 aa34.02■■■■□ 3.04
NECAB3-221ENST00000607055 PLEKHD1A6NEE1 506 aa34.02■■■■□ 3.04
NECAB3-221ENST00000607055 CDK11AQ9UQ88 783 aaPredicted RBP34.01■■■■□ 3.03
NECAB3-221ENST00000607055 APLP2Q06481 763 aa33.98■■■■□ 3.03
NECAB3-221ENST00000607055 TIAM1Q13009 1591 aa33.97■■■■□ 3.03
NECAB3-221ENST00000607055 CFAP43Q8NDM7 1665 aa33.96■■■■□ 3.03
NECAB3-221ENST00000607055 KCNH8Q96L42 1107 aa33.94■■■■□ 3.02
NECAB3-221ENST00000607055 MAP3K1Q13233 1512 aa33.91■■■■□ 3.02
NECAB3-221ENST00000607055 MAGI3Q5TCQ9 1506 aa33.91■■■■□ 3.02
NECAB3-221ENST00000607055 TROQ12816 1431 aaPredicted RBP33.9■■■■□ 3.02
NECAB3-221ENST00000607055 ABCC10Q5T3U5 1492 aa33.89■■■■□ 3.02
NECAB3-221ENST00000607055 MTUS2Q5JR59 1369 aa33.88■■■■□ 3.01
NECAB3-221ENST00000607055 DIP2BQ9P265 1576 aa33.86■■■■□ 3.01
NECAB3-221ENST00000607055 TRHP20396 242 aaPredicted RBP33.86■■■■□ 3.01
NECAB3-221ENST00000607055 FAM69CQ0P6D2 419 aa33.85■■■■□ 3.01
NECAB3-221ENST00000607055 KANK4Q5T7N3 995 aaPredicted RBP33.82■■■■□ 3
NECAB3-221ENST00000607055 LRRC9Q6ZRR7 1453 aa33.82■■■■□ 3
NECAB3-221ENST00000607055 EHBP1L1Q8N3D4 1523 aa33.81■■■■□ 3
NECAB3-221ENST00000607055 KIF14Q15058 1648 aa33.78■■■■□ 3
NECAB3-221ENST00000607055 GLI2P10070 1586 aa33.77■■■■□ 3
NECAB3-221ENST00000607055 KIF13AQ9H1H9 1805 aa33.77■■■■□ 3
NECAB3-221ENST00000607055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.72■■■□□ 2.99
NECAB3-221ENST00000607055 ABCA9Q8IUA7 1624 aa33.71■■■□□ 2.99
NECAB3-221ENST00000607055 TTC37Q6PGP7 1564 aa33.68■■■□□ 2.98
NECAB3-221ENST00000607055 PPARGC1BQ86YN6 1023 aaKnown RBP33.66■■■□□ 2.98
NECAB3-221ENST00000607055 SUPT6HQ7KZ85 1726 aaKnown RBP33.65■■■□□ 2.98
NECAB3-221ENST00000607055 MAP3K4Q9Y6R4 1608 aa33.65■■■□□ 2.98
NECAB3-221ENST00000607055 CD109Q6YHK3 1445 aa33.65■■■□□ 2.98
NECAB3-221ENST00000607055 NCOA2Q15596 1464 aa33.63■■■□□ 2.97
NECAB3-221ENST00000607055 TSPOAP1O95153 1857 aa33.57■■■□□ 2.96
NECAB3-221ENST00000607055 CCNB3Q8WWL7 1395 aa33.57■■■□□ 2.96
NECAB3-221ENST00000607055 MYO5CQ9NQX4 1742 aa33.53■■■□□ 2.96
NECAB3-221ENST00000607055 PLCH2O75038 1416 aa33.53■■■□□ 2.96
NECAB3-221ENST00000607055 GPATCH8Q9UKJ3 1502 aaKnown RBP33.51■■■□□ 2.95
NECAB3-221ENST00000607055 PPRC1Q5VV67 1664 aaKnown RBP33.5■■■□□ 2.95
NECAB3-221ENST00000607055 CDC42BPAQ5VT25 1732 aa33.49■■■□□ 2.95
NECAB3-221ENST00000607055 PREX2Q70Z35 1606 aa33.48■■■□□ 2.95
NECAB3-221ENST00000607055 TEX14Q8IWB6 1497 aa33.46■■■□□ 2.95
NECAB3-221ENST00000607055 ARHGAP5Q13017 1502 aa33.46■■■□□ 2.95
NECAB3-221ENST00000607055 PHLDB1Q86UU1 1377 aa33.45■■■□□ 2.94
NECAB3-221ENST00000607055 ARAP3Q8WWN8 1544 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms