RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
SRGAP2-209ENST00000604247 ITGAEP38570 1179 aa19.12■□□□□ 0.65
SRGAP2-209ENST00000604247 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
SRGAP2-209ENST00000604247 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
SRGAP2-209ENST00000604247 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
SRGAP2-209ENST00000604247 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
SRGAP2-209ENST00000604247 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
SRGAP2-209ENST00000604247 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
SRGAP2-209ENST00000604247 PELP1Q8IZL8 1130 aaKnown RBP19.04■□□□□ 0.64
SRGAP2-209ENST00000604247 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
SRGAP2-209ENST00000604247 MAP3K1Q13233 1512 aa18.99■□□□□ 0.63
SRGAP2-209ENST00000604247 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
SRGAP2-209ENST00000604247 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
SRGAP2-209ENST00000604247 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
SRGAP2-209ENST00000604247 CUL7Q14999 1698 aa18.97■□□□□ 0.63
SRGAP2-209ENST00000604247 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
SRGAP2-209ENST00000604247 RAB3GAP2Q9H2M9 1393 aa18.96■□□□□ 0.63
SRGAP2-209ENST00000604247 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
SRGAP2-209ENST00000604247 PHLDB1Q86UU1 1377 aa18.95■□□□□ 0.62
SRGAP2-209ENST00000604247 FHAD1B1AJZ9 1412 aa18.93■□□□□ 0.62
SRGAP2-209ENST00000604247 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
SRGAP2-209ENST00000604247 PCF11O94913 1555 aaKnown RBP18.92■□□□□ 0.62
SRGAP2-209ENST00000604247 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
SRGAP2-209ENST00000604247 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
SRGAP2-209ENST00000604247 CTTNBP2Q8WZ74 1663 aa18.87■□□□□ 0.61
SRGAP2-209ENST00000604247 CFAP43Q8NDM7 1665 aa18.87■□□□□ 0.61
SRGAP2-209ENST00000604247 MAPKBP1O60336 1514 aa18.86■□□□□ 0.61
SRGAP2-209ENST00000604247 EFCAB5A4FU69 1503 aa18.85■□□□□ 0.61
SRGAP2-209ENST00000604247 AQRO60306 1485 aaKnown RBP eCLIP18.84■□□□□ 0.61
SRGAP2-209ENST00000604247 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
SRGAP2-209ENST00000604247 CASKIN1Q8WXD9 1431 aa18.82■□□□□ 0.6
SRGAP2-209ENST00000604247 FYCO1Q9BQS8 1478 aa18.8■□□□□ 0.6
SRGAP2-209ENST00000604247 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
SRGAP2-209ENST00000604247 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
SRGAP2-209ENST00000604247 SAMD9Q5K651 1589 aa18.78■□□□□ 0.6
SRGAP2-209ENST00000604247 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
SRGAP2-209ENST00000604247 FMN1Q68DA7 1419 aa18.74■□□□□ 0.59
SRGAP2-209ENST00000604247 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
SRGAP2-209ENST00000604247 ADAMTS12P58397 1594 aa18.7■□□□□ 0.58
SRGAP2-209ENST00000604247 WDR62O43379 1518 aa18.7■□□□□ 0.58
SRGAP2-209ENST00000604247 LRRIQ1Q96JM4 1722 aa18.69■□□□□ 0.58
SRGAP2-209ENST00000604247 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
SRGAP2-209ENST00000604247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.68■□□□□ 0.58
SRGAP2-209ENST00000604247 MTUS2Q5JR59 1369 aa18.67■□□□□ 0.58
SRGAP2-209ENST00000604247 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
SRGAP2-209ENST00000604247 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
SRGAP2-209ENST00000604247 KCNH8Q96L42 1107 aa18.63■□□□□ 0.57
SRGAP2-209ENST00000604247 PTPRKQ15262 1439 aa18.61■□□□□ 0.57
SRGAP2-209ENST00000604247 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
SRGAP2-209ENST00000604247 DDX10Q13206 875 aaKnown RBP18.6■□□□□ 0.57
SRGAP2-209ENST00000604247 MAGI3Q5TCQ9 1506 aa18.6■□□□□ 0.57
SRGAP2-209ENST00000604247 TIMELESSQ9UNS1 1208 aa18.6■□□□□ 0.57
SRGAP2-209ENST00000604247 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
SRGAP2-209ENST00000604247 HIRIP3Q9BW71 556 aaPredicted RBP18.59■□□□□ 0.57
SRGAP2-209ENST00000604247 NCOA2Q15596 1464 aa18.57■□□□□ 0.56
SRGAP2-209ENST00000604247 ERCC6Q03468 1493 aa18.57■□□□□ 0.56
SRGAP2-209ENST00000604247 CCDC18Q5T9S5 1454 aa18.56■□□□□ 0.56
SRGAP2-209ENST00000604247 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
SRGAP2-209ENST00000604247 THOC2Q8NI27 1593 aaKnown RBP18.55■□□□□ 0.56
SRGAP2-209ENST00000604247 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
SRGAP2-209ENST00000604247 HFM1A2PYH4 1435 aa18.53■□□□□ 0.56
SRGAP2-209ENST00000604247 UGGT2Q9NYU1 1516 aa18.52■□□□□ 0.56
SRGAP2-209ENST00000604247 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.55
SRGAP2-209ENST00000604247 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
SRGAP2-209ENST00000604247 ARID3CA6NKF2 412 aa18.51■□□□□ 0.55
SRGAP2-209ENST00000604247 NAIPQ13075 1403 aa18.5■□□□□ 0.55
SRGAP2-209ENST00000604247 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
SRGAP2-209ENST00000604247 GRIN2AQ12879 1464 aa18.5■□□□□ 0.55
SRGAP2-209ENST00000604247 UACAQ9BZF9 1416 aa18.5■□□□□ 0.55
SRGAP2-209ENST00000604247 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
SRGAP2-209ENST00000604247 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
SRGAP2-209ENST00000604247 CDK13Q14004 1512 aaKnown RBP18.49■□□□□ 0.55
SRGAP2-209ENST00000604247 KIAA0586Q9BVV6 1533 aa18.49■□□□□ 0.55
SRGAP2-209ENST00000604247 EPRSP07814 1512 aaKnown RBP18.49■□□□□ 0.55
SRGAP2-209ENST00000604247 EHBP1L1Q8N3D4 1523 aa18.49■□□□□ 0.55
SRGAP2-209ENST00000604247 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
SRGAP2-209ENST00000604247 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
SRGAP2-209ENST00000604247 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
SRGAP2-209ENST00000604247 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
SRGAP2-209ENST00000604247 KIAA0556O60303 1618 aa18.43■□□□□ 0.54
SRGAP2-209ENST00000604247 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
SRGAP2-209ENST00000604247 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
SRGAP2-209ENST00000604247 SYNJ2O15056 1496 aa18.39■□□□□ 0.53
SRGAP2-209ENST00000604247 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
SRGAP2-209ENST00000604247 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
SRGAP2-209ENST00000604247 FBLN2P98095 1184 aa18.38■□□□□ 0.53
SRGAP2-209ENST00000604247 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
SRGAP2-209ENST00000604247 ANP32CO43423 234 aa18.35■□□□□ 0.53
SRGAP2-209ENST00000604247 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
SRGAP2-209ENST00000604247 KDM5BQ9UGL1 1544 aa18.33■□□□□ 0.52
SRGAP2-209ENST00000604247 KDM6BO15054 1643 aa18.33■□□□□ 0.52
SRGAP2-209ENST00000604247 DENND4BO75064 1496 aaPredicted RBP18.32■□□□□ 0.52
SRGAP2-209ENST00000604247 NUP160Q12769 1436 aa18.32■□□□□ 0.52
SRGAP2-209ENST00000604247 CCER2I3L3R5 266 aa18.31■□□□□ 0.52
SRGAP2-209ENST00000604247 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
SRGAP2-209ENST00000604247 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
SRGAP2-209ENST00000604247 RAPGEF6Q8TEU7 1601 aa18.3■□□□□ 0.52
SRGAP2-209ENST00000604247 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
SRGAP2-209ENST00000604247 JPH4Q96JJ6 628 aa18.28■□□□□ 0.52
SRGAP2-209ENST00000604247 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms