RNA–Protein interactions for RNA: ENST00000602566.5

NOTCH2-207, Transcript of notch 2, humanhuman

TSL 1 (best) BASIC

Gene NOTCH2, Length 5,046 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-207ENST00000602566 BECN1Q14457 450 aa11.69□□□□□ -0.54
NOTCH2-207ENST00000602566 CUX2O14529 1486 aa11.69□□□□□ -0.54
NOTCH2-207ENST00000602566 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
NOTCH2-207ENST00000602566 CCDC136Q96JN2 1154 aa11.68□□□□□ -0.54
NOTCH2-207ENST00000602566 CFTRP13569 1480 aa11.68□□□□□ -0.54
NOTCH2-207ENST00000602566 SOGA1O94964 1423 aa11.68□□□□□ -0.54
NOTCH2-207ENST00000602566 HNRNPUQ00839 825 aaKnown RBP eCLIP11.66□□□□□ -0.54
NOTCH2-207ENST00000602566 TRIM52Q96A61 297 aa11.66□□□□□ -0.54
NOTCH2-207ENST00000602566 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
NOTCH2-207ENST00000602566 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
NOTCH2-207ENST00000602566 MIER1Q8N108 512 aa11.65□□□□□ -0.54
NOTCH2-207ENST00000602566 TRIM44Q96DX7 344 aaPredicted RBP11.65□□□□□ -0.54
NOTCH2-207ENST00000602566 TNIKQ9UKE5 1360 aa11.64□□□□□ -0.55
NOTCH2-207ENST00000602566 NEFMP07197 916 aa11.63□□□□□ -0.55
NOTCH2-207ENST00000602566 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
NOTCH2-207ENST00000602566 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
NOTCH2-207ENST00000602566 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
NOTCH2-207ENST00000602566 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
NOTCH2-207ENST00000602566 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
NOTCH2-207ENST00000602566 LAMC3Q9Y6N6 1575 aa11.6□□□□□ -0.55
NOTCH2-207ENST00000602566 CARMIL1Q5VZK9 1371 aa11.6□□□□□ -0.55
NOTCH2-207ENST00000602566 L1TD1Q5T7N2 865 aaKnown RBP11.6□□□□□ -0.55
NOTCH2-207ENST00000602566 CLIP1P30622 1438 aa11.58□□□□□ -0.56
NOTCH2-207ENST00000602566 PTMSP20962 102 aa11.58□□□□□ -0.56
NOTCH2-207ENST00000602566 GOLGA6L22H0YM25 854 aa11.56□□□□□ -0.56
NOTCH2-207ENST00000602566 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
NOTCH2-207ENST00000602566 NESP48681 1621 aa11.55□□□□□ -0.56
NOTCH2-207ENST00000602566 NPM2Q86SE8 214 aaKnown RBP11.55□□□□□ -0.56
NOTCH2-207ENST00000602566 USP35Q9P2H5 1018 aa11.55□□□□□ -0.56
NOTCH2-207ENST00000602566 DNAJC5BQ9UF47 199 aa11.55□□□□□ -0.56
NOTCH2-207ENST00000602566 CEP162Q5TB80 1403 aa11.55□□□□□ -0.56
NOTCH2-207ENST00000602566 TDRD9Q8NDG6 1382 aaKnown RBP11.55□□□□□ -0.56
NOTCH2-207ENST00000602566 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
NOTCH2-207ENST00000602566 DDX10Q13206 875 aaKnown RBP11.53□□□□□ -0.56
NOTCH2-207ENST00000602566 HSP90AA1P07900 732 aaKnown RBP11.52□□□□□ -0.56
NOTCH2-207ENST00000602566 NBR1Q14596 966 aa11.52□□□□□ -0.57
NOTCH2-207ENST00000602566 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
NOTCH2-207ENST00000602566 EIF4G2P78344 907 aaKnown RBP eCLIP11.5□□□□□ -0.57
NOTCH2-207ENST00000602566 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
NOTCH2-207ENST00000602566 TMC1Q8TDI8 760 aa11.49□□□□□ -0.57
NOTCH2-207ENST00000602566 MRS2Q9HD23 443 aa11.49□□□□□ -0.57
NOTCH2-207ENST00000602566 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
NOTCH2-207ENST00000602566 RAPGEF2Q9Y4G8 1499 aa11.48□□□□□ -0.57
NOTCH2-207ENST00000602566 DEKP35659 375 aaKnown RBP11.47□□□□□ -0.57
NOTCH2-207ENST00000602566 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
NOTCH2-207ENST00000602566 TOPBP1Q92547 1522 aa11.47□□□□□ -0.57
NOTCH2-207ENST00000602566 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
NOTCH2-207ENST00000602566 IFT140Q96RY7 1462 aa11.45□□□□□ -0.58
NOTCH2-207ENST00000602566 ARID3CA6NKF2 412 aa11.45□□□□□ -0.58
NOTCH2-207ENST00000602566 RBM19Q9Y4C8 960 aaKnown RBP11.45□□□□□ -0.58
NOTCH2-207ENST00000602566 FANCIQ9NVI1 1328 aa11.45□□□□□ -0.58
NOTCH2-207ENST00000602566 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
NOTCH2-207ENST00000602566 SYNJ1O43426 1573 aa11.44□□□□□ -0.58
NOTCH2-207ENST00000602566 CHMP4BQ9H444 224 aaKnown RBP11.44□□□□□ -0.58
NOTCH2-207ENST00000602566 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
NOTCH2-207ENST00000602566 CUX1P39880 1505 aa11.43□□□□□ -0.58
NOTCH2-207ENST00000602566 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
NOTCH2-207ENST00000602566 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
NOTCH2-207ENST00000602566 CARMIL2Q6F5E8 1435 aa11.42□□□□□ -0.58
NOTCH2-207ENST00000602566 MS4A1P11836 297 aa11.42□□□□□ -0.58
NOTCH2-207ENST00000602566 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
NOTCH2-207ENST00000602566 MTUS2Q5JR59 1369 aa11.41□□□□□ -0.58
NOTCH2-207ENST00000602566 TCERG1O14776 1098 aaKnown RBP11.41□□□□□ -0.58
NOTCH2-207ENST00000602566 POLA1P09884 1462 aaPredicted RBP11.39□□□□□ -0.59
NOTCH2-207ENST00000602566 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
NOTCH2-207ENST00000602566 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
NOTCH2-207ENST00000602566 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
NOTCH2-207ENST00000602566 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
NOTCH2-207ENST00000602566 IGF1RP08069 1367 aa11.37□□□□□ -0.59
NOTCH2-207ENST00000602566 NAP1L5Q96NT1 182 aaPredicted RBP11.36□□□□□ -0.59
NOTCH2-207ENST00000602566 RUSC2Q8N2Y8 1516 aa11.36□□□□□ -0.59
NOTCH2-207ENST00000602566 PLEKHD1A6NEE1 506 aa11.35□□□□□ -0.59
NOTCH2-207ENST00000602566 SLC4A1APQ9BWU0 796 aaKnown RBP11.34□□□□□ -0.59
NOTCH2-207ENST00000602566 AQRO60306 1485 aaKnown RBP eCLIP11.34□□□□□ -0.59
NOTCH2-207ENST00000602566 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
NOTCH2-207ENST00000602566 MYH16Q9H6N6 1097 aa11.34□□□□□ -0.59
NOTCH2-207ENST00000602566 ZNF777Q9ULD5 760 aaPredicted RBP11.33□□□□□ -0.6
NOTCH2-207ENST00000602566 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
NOTCH2-207ENST00000602566 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
NOTCH2-207ENST00000602566 CDK11BP21127 795 aaKnown RBP11.32□□□□□ -0.6
NOTCH2-207ENST00000602566 IPO9Q96P70 1041 aaKnown RBP11.32□□□□□ -0.6
NOTCH2-207ENST00000602566 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
NOTCH2-207ENST00000602566 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
NOTCH2-207ENST00000602566 URB2Q14146 1524 aaKnown RBP11.31□□□□□ -0.6
NOTCH2-207ENST00000602566 ERICH3Q5RHP9 1530 aa11.31□□□□□ -0.6
NOTCH2-207ENST00000602566 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
NOTCH2-207ENST00000602566 KIF21BO75037 1637 aa11.3□□□□□ -0.6
NOTCH2-207ENST00000602566 CASC1Q6TDU7 716 aa11.3□□□□□ -0.6
NOTCH2-207ENST00000602566 CCNB3Q8WWL7 1395 aa11.3□□□□□ -0.6
NOTCH2-207ENST00000602566 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
NOTCH2-207ENST00000602566 GOLGA6L6A8MZA4 724 aa11.29□□□□□ -0.6
NOTCH2-207ENST00000602566 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
NOTCH2-207ENST00000602566 PDE3BQ13370 1112 aa11.28□□□□□ -0.6
NOTCH2-207ENST00000602566 MSNP26038 577 aaKnown RBP11.28□□□□□ -0.6
NOTCH2-207ENST00000602566 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
NOTCH2-207ENST00000602566 NRDCO43847 1150 aa11.27□□□□□ -0.6
NOTCH2-207ENST00000602566 PNNQ9H307 717 aaKnown RBP11.27□□□□□ -0.6
NOTCH2-207ENST00000602566 PRDM2Q13029 1718 aa11.27□□□□□ -0.61
NOTCH2-207ENST00000602566 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
NOTCH2-207ENST00000602566 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms